RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 NTF4P34130 210 aa10.64□□□□□ -0.71
HLCS-201ENST00000336648 LRRC37AA6NMS7 1700 aa10.64□□□□□ -0.71
HLCS-201ENST00000336648 TFF1P04155 84 aa10.64□□□□□ -0.71
HLCS-201ENST00000336648 CEACAM8P31997 349 aaPredicted RBP10.64□□□□□ -0.71
HLCS-201ENST00000336648 SVIPQ8NHG7 77 aa10.64□□□□□ -0.71
HLCS-201ENST00000336648 C15orf62A8K5M9 175 aa10.64□□□□□ -0.71
HLCS-201ENST00000336648 AZU1P20160 251 aa10.64□□□□□ -0.71
HLCS-201ENST00000336648 C20orf144Q9BQM9 153 aa10.64□□□□□ -0.71
HLCS-201ENST00000336648 RHPN1-AS1Q9BWJ2 59 aa10.64□□□□□ -0.71
HLCS-201ENST00000336648 A8MWP6 167 aa10.63□□□□□ -0.71
HLCS-201ENST00000336648 CLPSL1A2RUU4 121 aa10.63□□□□□ -0.71
HLCS-201ENST00000336648 COL11A1P12107 1806 aaPredicted RBP10.63□□□□□ -0.71
HLCS-201ENST00000336648 QRFPP83859 136 aa10.63□□□□□ -0.71
HLCS-201ENST00000336648 C14orf178Q8N769 122 aaPredicted RBP10.63□□□□□ -0.71
HLCS-201ENST00000336648 DICER1Q9UPY3 1922 aaKnown RBP10.63□□□□□ -0.71
HLCS-201ENST00000336648 TRAV25A0A0B4J276 109 aa10.63□□□□□ -0.71
HLCS-201ENST00000336648 CRLF1O75462 422 aa10.63□□□□□ -0.71
HLCS-201ENST00000336648 IGHG4P01861 327 aa10.63□□□□□ -0.71
HLCS-201ENST00000336648 YPEL3P61236 119 aaPredicted RBP10.63□□□□□ -0.71
HLCS-201ENST00000336648 MDS2Q8NDY4 140 aa10.63□□□□□ -0.71
HLCS-201ENST00000336648 WFDC12Q8WWY7 111 aa10.63□□□□□ -0.71
HLCS-201ENST00000336648 REG4Q9BYZ8 158 aa10.63□□□□□ -0.71
HLCS-201ENST00000336648 SPTA1P02549 2419 aa10.62□□□□□ -0.71
HLCS-201ENST00000336648 COL11A2P13942 1736 aaPredicted RBP10.62□□□□□ -0.71
HLCS-201ENST00000336648 A0A087WV48 116 aa10.62□□□□□ -0.71
HLCS-201ENST00000336648 CHKB-CPT1BH3BT56 60 aa10.62□□□□□ -0.71
HLCS-201ENST00000336648 BMPERQ8N8U9 685 aa10.62□□□□□ -0.71
HLCS-201ENST00000336648 LINC01356Q8N9X3 169 aa10.62□□□□□ -0.71
HLCS-201ENST00000336648 POLR3KQ9Y2Y1 108 aaPredicted RBP10.62□□□□□ -0.71
HLCS-201ENST00000336648 CFPP27918 469 aa10.62□□□□□ -0.71
HLCS-201ENST00000336648 NBL1P41271 181 aa10.62□□□□□ -0.71
HLCS-201ENST00000336648 SCN8AQ9UQD0 1980 aa10.62□□□□□ -0.71
HLCS-201ENST00000336648 SVILO95425 2214 aa10.62□□□□□ -0.71
HLCS-201ENST00000336648 EGR2P11161 476 aaPredicted RBP10.62□□□□□ -0.71
HLCS-201ENST00000336648 PRB3Q04118 309 aaPredicted RBP10.62□□□□□ -0.71
HLCS-201ENST00000336648 ZNF236Q9UL36 1845 aa10.62□□□□□ -0.71
HLCS-201ENST00000336648 MTCL1Q9Y4B5 1905 aaKnown RBP10.62□□□□□ -0.71
HLCS-201ENST00000336648 MORN5Q5VZ52 161 aa10.61□□□□□ -0.71
HLCS-201ENST00000336648 FAM110DQ8TAY7 271 aaPredicted RBP10.61□□□□□ -0.71
HLCS-201ENST00000336648 LINC00527Q9UJ94 153 aa10.61□□□□□ -0.71
HLCS-201ENST00000336648 TRAV3A0A0B4J244 114 aa10.61□□□□□ -0.71
HLCS-201ENST00000336648 TRAV12-1A0A0B4J245 112 aa10.61□□□□□ -0.71
HLCS-201ENST00000336648 LINC00473A8K010 186 aa10.61□□□□□ -0.71
HLCS-201ENST00000336648 PRSS46E5RG02 174 aa10.61□□□□□ -0.71
HLCS-201ENST00000336648 TMEM219Q86XT9 240 aa10.61□□□□□ -0.71
HLCS-201ENST00000336648 HGFACQ04756 655 aa10.6□□□□□ -0.71
HLCS-201ENST00000336648 NKAPP1Q8N9T2 125 aa10.6□□□□□ -0.71
HLCS-201ENST00000336648 OR11H6Q8NGC7 330 aa10.6□□□□□ -0.71
HLCS-201ENST00000336648 NDUFS5O43920 106 aa10.6□□□□□ -0.71
HLCS-201ENST00000336648 FGF6P10767 208 aa10.6□□□□□ -0.71
HLCS-201ENST00000336648 KLRD1Q13241 179 aa10.6□□□□□ -0.71
HLCS-201ENST00000336648 CARD19Q96LW7 228 aa10.6□□□□□ -0.71
HLCS-201ENST00000336648 hADV29S1A0JD25 119 aa10.6□□□□□ -0.71
HLCS-201ENST00000336648 B5MCH6 92 aa10.6□□□□□ -0.71
HLCS-201ENST00000336648 CRYBA4P53673 196 aa10.6□□□□□ -0.71
HLCS-201ENST00000336648 SRSF2Q01130 221 aaKnown RBP10.6□□□□□ -0.71
HLCS-201ENST00000336648 ETDBQ3ZM63 59 aa10.6□□□□□ -0.71
HLCS-201ENST00000336648 Q8TAT8 98 aa10.6□□□□□ -0.71
HLCS-201ENST00000336648 DEFB104AQ8WTQ1 72 aa10.6□□□□□ -0.71
HLCS-201ENST00000336648 STPG4Q8N801 248 aa10.6□□□□□ -0.71
HLCS-201ENST00000336648 PATJQ8NI35 1801 aa10.59□□□□□ -0.71
HLCS-201ENST00000336648 IGKV1D-17A0A075B6S4 117 aa10.59□□□□□ -0.71
HLCS-201ENST00000336648 Q8N8P6 123 aa10.59□□□□□ -0.71
HLCS-201ENST00000336648 KLHL30-AS1Q8NEE0 82 aa10.59□□□□□ -0.71
HLCS-201ENST00000336648 A0A1W2PPI3 338 aa10.59□□□□□ -0.71
HLCS-201ENST00000336648 FOXG1P55316 489 aaPredicted RBP10.59□□□□□ -0.71
HLCS-201ENST00000336648 C15orf53Q8NAA6 179 aa10.59□□□□□ -0.71
HLCS-201ENST00000336648 J3KT08 172 aa10.59□□□□□ -0.71
HLCS-201ENST00000336648 AMN1Q8IY45 258 aa10.59□□□□□ -0.71
HLCS-201ENST00000336648 TMEM243Q9BU79 118 aa10.59□□□□□ -0.71
HLCS-201ENST00000336648 IGHV1-24A0A0C4DH33 117 aa10.59□□□□□ -0.71
HLCS-201ENST00000336648 A0A1W2PPM0 123 aa10.59□□□□□ -0.71
HLCS-201ENST00000336648 CLPSP04118 112 aa10.59□□□□□ -0.71
HLCS-201ENST00000336648 NPSP0C0P6 89 aa10.59□□□□□ -0.71
HLCS-201ENST00000336648 PRR31Q5SQ13 230 aa10.59□□□□□ -0.71
HLCS-201ENST00000336648 ARMS2P0C7Q2 107 aa10.58□□□□□ -0.72
HLCS-201ENST00000336648 KNCNA6PVL3 124 aa10.58□□□□□ -0.72
HLCS-201ENST00000336648 PFN1P07737 140 aaKnown RBP10.58□□□□□ -0.72
HLCS-201ENST00000336648 RALGAPA2Q2PPJ7 1873 aa10.58□□□□□ -0.72
HLCS-201ENST00000336648 A0A0G2JNJ9 132 aa10.58□□□□□ -0.72
HLCS-201ENST00000336648 RPL35AP18077 110 aaKnown RBP10.58□□□□□ -0.72
HLCS-201ENST00000336648 UBE2E1P51965 193 aa10.58□□□□□ -0.72
HLCS-201ENST00000336648 NDPQ00604 133 aa10.58□□□□□ -0.72
HLCS-201ENST00000336648 Q9UFV3 132 aa10.58□□□□□ -0.72
HLCS-201ENST00000336648 I3L3M4 83 aa10.58□□□□□ -0.72
HLCS-201ENST00000336648 IGHV3-53P01767 116 aa10.58□□□□□ -0.72
HLCS-201ENST00000336648 Q6ZS92 163 aa10.58□□□□□ -0.72
HLCS-201ENST00000336648 SMKR1H3BMG3 65 aa10.57□□□□□ -0.72
HLCS-201ENST00000336648 AHCTF1Q8WYP5 2266 aa10.57□□□□□ -0.72
HLCS-201ENST00000336648 TRBV25-1A0A075B6N4 114 aa10.57□□□□□ -0.72
HLCS-201ENST00000336648 IGHG2P01859 326 aa10.57□□□□□ -0.72
HLCS-201ENST00000336648 WFDC9Q8NEX5 89 aa10.57□□□□□ -0.72
HLCS-201ENST00000336648 Q8TCH9 128 aa10.57□□□□□ -0.72
HLCS-201ENST00000336648 MCRIP2Q9BUT9 160 aaKnown RBP10.57□□□□□ -0.72
HLCS-201ENST00000336648 OTOFQ9HC10 1997 aa10.57□□□□□ -0.72
HLCS-201ENST00000336648 TRAV13-2A0A0B4J235 113 aa10.57□□□□□ -0.72
HLCS-201ENST00000336648 C11orf44Q8N8P7 122 aa10.57□□□□□ -0.72
HLCS-201ENST00000336648 SCRT2Q9NQ03 307 aa10.57□□□□□ -0.72
HLCS-201ENST00000336648 B3GALT5-AS1P59052 145 aa10.57□□□□□ -0.72
HLCS-201ENST00000336648 FAM104BQ5XKR9 115 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms