RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 K7EIL1 84 aa10.49□□□□□ -0.73
APOBEC3B-202ENST00000335760 HIST1H1EP10412 219 aaKnown RBP10.49□□□□□ -0.73
APOBEC3B-202ENST00000335760 ID1P41134 155 aa10.49□□□□□ -0.73
APOBEC3B-202ENST00000335760 SNRPD3P62318 126 aaKnown RBP10.49□□□□□ -0.73
APOBEC3B-202ENST00000335760 SAMD13Q5VXD3 122 aa10.49□□□□□ -0.73
APOBEC3B-202ENST00000335760 EIF5AL1Q6IS14 154 aaKnown RBP10.49□□□□□ -0.73
APOBEC3B-202ENST00000335760 DEFB125Q8N687 156 aa10.49□□□□□ -0.73
APOBEC3B-202ENST00000335760 LRRC20Q8TCA0 184 aa10.49□□□□□ -0.73
APOBEC3B-202ENST00000335760 RNF141Q8WVD5 230 aa10.49□□□□□ -0.73
APOBEC3B-202ENST00000335760 HRH4Q9H3N8 390 aa10.49□□□□□ -0.73
APOBEC3B-202ENST00000335760 MAP6D1Q9H9H5 199 aa10.49□□□□□ -0.73
APOBEC3B-202ENST00000335760 ZNF586Q9NXT0 402 aa10.49□□□□□ -0.73
APOBEC3B-202ENST00000335760 NBEAL1Q6ZS30 2694 aa10.48□□□□□ -0.73
APOBEC3B-202ENST00000335760 UMAD1C9J7I0 102 aa10.48□□□□□ -0.73
APOBEC3B-202ENST00000335760 OR10J4P0C629 311 aa10.48□□□□□ -0.73
APOBEC3B-202ENST00000335760 PSMB3P49720 205 aa10.48□□□□□ -0.73
APOBEC3B-202ENST00000335760 DEFB131AP59861 70 aa10.48□□□□□ -0.73
APOBEC3B-202ENST00000335760 ZNF726P1Q15940 193 aa10.48□□□□□ -0.73
APOBEC3B-202ENST00000335760 GUK1Q16774 197 aa10.48□□□□□ -0.73
APOBEC3B-202ENST00000335760 PSMG4Q5JS54 123 aa10.48□□□□□ -0.73
APOBEC3B-202ENST00000335760 IGFL4Q6B9Z1 124 aa10.48□□□□□ -0.73
APOBEC3B-202ENST00000335760 LCN15Q6UWW0 184 aa10.48□□□□□ -0.73
APOBEC3B-202ENST00000335760 SSX7Q7RTT5 188 aa10.48□□□□□ -0.73
APOBEC3B-202ENST00000335760 APRG1Q8IVJ8 170 aa10.48□□□□□ -0.73
APOBEC3B-202ENST00000335760 BLNKQ8WV28 456 aa10.48□□□□□ -0.73
APOBEC3B-202ENST00000335760 ZNF503Q96F45 646 aa10.48□□□□□ -0.73
APOBEC3B-202ENST00000335760 LINC00052Q96N35 136 aa10.48□□□□□ -0.73
APOBEC3B-202ENST00000335760 TRAV8-2A0A0B4J237 113 aa10.47□□□□□ -0.73
APOBEC3B-202ENST00000335760 CTXND1A0A1B0GTU2 59 aa10.47□□□□□ -0.73
APOBEC3B-202ENST00000335760 ISLRO14498 428 aa10.47□□□□□ -0.73
APOBEC3B-202ENST00000335760 STAG3L2P0CL84 134 aa10.47□□□□□ -0.73
APOBEC3B-202ENST00000335760 STAG3L3P0CL85 134 aa10.47□□□□□ -0.73
APOBEC3B-202ENST00000335760 UBE2L3P68036 154 aaKnown RBP10.47□□□□□ -0.73
APOBEC3B-202ENST00000335760 DEFB121Q5J5C9 76 aa10.47□□□□□ -0.73
APOBEC3B-202ENST00000335760 PQLC2Q6ZP29 291 aa10.47□□□□□ -0.73
APOBEC3B-202ENST00000335760 FXYD5Q96DB9 178 aa10.47□□□□□ -0.73
APOBEC3B-202ENST00000335760 FAM110AQ9BQ89 295 aa10.47□□□□□ -0.73
APOBEC3B-202ENST00000335760 TRBV19A0A075B6N1 114 aa10.46□□□□□ -0.74
APOBEC3B-202ENST00000335760 SLC17A3O00476 420 aa10.46□□□□□ -0.74
APOBEC3B-202ENST00000335760 NBEAP1P0C6P0 100 aa10.46□□□□□ -0.74
APOBEC3B-202ENST00000335760 ARL14EPLP0DKL9 152 aa10.46□□□□□ -0.74
APOBEC3B-202ENST00000335760 HLA-DMBP28068 263 aa10.46□□□□□ -0.74
APOBEC3B-202ENST00000335760 FHITP49789 147 aa10.46□□□□□ -0.74
APOBEC3B-202ENST00000335760 ZNF124Q15973 351 aa10.46□□□□□ -0.74
APOBEC3B-202ENST00000335760 RNF182Q8N6D2 247 aa10.46□□□□□ -0.74
APOBEC3B-202ENST00000335760 FAM213BQ8TBF2 198 aa10.46□□□□□ -0.74
APOBEC3B-202ENST00000335760 MRAPQ8TCY5 172 aa10.46□□□□□ -0.74
APOBEC3B-202ENST00000335760 SAT2Q96F10 170 aaPredicted RBP10.46□□□□□ -0.74
APOBEC3B-202ENST00000335760 C20orf173Q96LM9 149 aa10.46□□□□□ -0.74
APOBEC3B-202ENST00000335760 TUBA4BQ9H853 241 aa10.46□□□□□ -0.74
APOBEC3B-202ENST00000335760 SRD5A3Q9H8P0 318 aa10.46□□□□□ -0.74
APOBEC3B-202ENST00000335760 ZNF331Q9NQX6 463 aaPredicted RBP10.46□□□□□ -0.74
APOBEC3B-202ENST00000335760 ZNF253O75346 499 aa10.45□□□□□ -0.74
APOBEC3B-202ENST00000335760 CXorf1O96002 111 aa10.45□□□□□ -0.74
APOBEC3B-202ENST00000335760 IGHV4-30-4P0DP06 118 aa10.45□□□□□ -0.74
APOBEC3B-202ENST00000335760 SLC50A1Q9BRV3 221 aa10.45□□□□□ -0.74
APOBEC3B-202ENST00000335760 NDUFB4O95168 129 aa10.44□□□□□ -0.74
APOBEC3B-202ENST00000335760 GCHFRP30047 84 aa10.44□□□□□ -0.74
APOBEC3B-202ENST00000335760 RAB5CP51148 216 aa10.44□□□□□ -0.74
APOBEC3B-202ENST00000335760 FGF8P55075 233 aaPredicted RBP10.44□□□□□ -0.74
APOBEC3B-202ENST00000335760 PDE6HQ13956 83 aa10.44□□□□□ -0.74
APOBEC3B-202ENST00000335760 DPPA3Q6W0C5 159 aa10.44□□□□□ -0.74
APOBEC3B-202ENST00000335760 IQCF2Q8IXL9 164 aa10.44□□□□□ -0.74
APOBEC3B-202ENST00000335760 PHYHIPLQ96FC7 376 aa10.44□□□□□ -0.74
APOBEC3B-202ENST00000335760 CITED4Q96RK1 184 aa10.44□□□□□ -0.74
APOBEC3B-202ENST00000335760 MAP1LC3B2A6NCE7 125 aa10.43□□□□□ -0.74
APOBEC3B-202ENST00000335760 KNCNA6PVL3 124 aa10.43□□□□□ -0.74
APOBEC3B-202ENST00000335760 SULT1A2P50226 295 aa10.43□□□□□ -0.74
APOBEC3B-202ENST00000335760 DEFB1P60022 68 aa10.43□□□□□ -0.74
APOBEC3B-202ENST00000335760 PSG9Q00887 426 aa10.43□□□□□ -0.74
APOBEC3B-202ENST00000335760 PSG3Q16557 428 aa10.43□□□□□ -0.74
APOBEC3B-202ENST00000335760 FAM74A1Q5RGS3 127 aa10.43□□□□□ -0.74
APOBEC3B-202ENST00000335760 ZNF738Q8NE65 137 aa10.43□□□□□ -0.74
APOBEC3B-202ENST00000335760 MAP1LC3BQ9GZQ8 125 aa10.43□□□□□ -0.74
APOBEC3B-202ENST00000335760 RANP62826 216 aaKnown RBP10.42□□□□□ -0.74
APOBEC3B-202ENST00000335760 ACTL10Q5JWF8 245 aa10.42□□□□□ -0.74
APOBEC3B-202ENST00000335760 ALKAL2Q6UX46 152 aa10.42□□□□□ -0.74
APOBEC3B-202ENST00000335760 EXOC3-AS1Q8N2X6 119 aa10.42□□□□□ -0.74
APOBEC3B-202ENST00000335760 MBD3L1Q8WWY6 194 aa10.42□□□□□ -0.74
APOBEC3B-202ENST00000335760 AAMDCQ9H7C9 122 aa10.42□□□□□ -0.74
APOBEC3B-202ENST00000335760 TMEM167BQ9NRX6 74 aa10.42□□□□□ -0.74
APOBEC3B-202ENST00000335760 CLEC5AQ9NY25 188 aa10.42□□□□□ -0.74
APOBEC3B-202ENST00000335760 RBMY1BA6NDE4 496 aaKnown RBP10.41□□□□□ -0.74
APOBEC3B-202ENST00000335760 RBMY1EA6NEQ0 496 aaKnown RBP10.41□□□□□ -0.74
APOBEC3B-202ENST00000335760 A8MZ25 164 aa10.41□□□□□ -0.74
APOBEC3B-202ENST00000335760 RBMY1DP0C7P1 496 aaKnown RBP10.41□□□□□ -0.74
APOBEC3B-202ENST00000335760 PRB4P10163 310 aaPredicted RBP10.41□□□□□ -0.74
APOBEC3B-202ENST00000335760 STHQ8IWL8 128 aa10.41□□□□□ -0.74
APOBEC3B-202ENST00000335760 SUN5Q8TC36 379 aa10.41□□□□□ -0.74
APOBEC3B-202ENST00000335760 SFT2D1Q8WV19 159 aa10.41□□□□□ -0.74
APOBEC3B-202ENST00000335760 TMPRSS5Q9H3S3 457 aa10.41□□□□□ -0.74
APOBEC3B-202ENST00000335760 A0A1B0GV50 99 aa10.4□□□□□ -0.74
APOBEC3B-202ENST00000335760 ZNF705FA8MVS1 300 aaPredicted RBP10.4□□□□□ -0.74
APOBEC3B-202ENST00000335760 F6UB75 175 aa10.4□□□□□ -0.74
APOBEC3B-202ENST00000335760 H2AFB1P0C5Y9 115 aa10.4□□□□□ -0.74
APOBEC3B-202ENST00000335760 FRMD6-AS1P0C7T7 363 aa10.4□□□□□ -0.74
APOBEC3B-202ENST00000335760 ICAM4Q14773 271 aa10.4□□□□□ -0.74
APOBEC3B-202ENST00000335760 GDF5OSQ5U4N7 250 aa10.4□□□□□ -0.74
APOBEC3B-202ENST00000335760 EBLN2Q6P2I7 272 aa10.4□□□□□ -0.74
APOBEC3B-202ENST00000335760 FOXI2Q6ZQN5 318 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms