RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 SEC61GP60059 68 aa13.45□□□□□ -0.26
PTCH1-201ENST00000331920 FAM90A1Q86YD7 464 aa13.45□□□□□ -0.26
PTCH1-201ENST00000331920 Q9HAA7 133 aa13.45□□□□□ -0.26
PTCH1-201ENST00000331920 RNASE13Q5GAN3 156 aaKnown RBP13.44□□□□□ -0.26
PTCH1-201ENST00000331920 TANC2Q9HCD6 1990 aa13.44□□□□□ -0.26
PTCH1-201ENST00000331920 LINC01559Q495D7 138 aa13.44□□□□□ -0.26
PTCH1-201ENST00000331920 TMEM200BQ69YZ2 307 aa13.44□□□□□ -0.26
PTCH1-201ENST00000331920 IGHG2P01859 326 aa13.44□□□□□ -0.26
PTCH1-201ENST00000331920 RNASE2P10153 161 aaKnown RBP13.44□□□□□ -0.26
PTCH1-201ENST00000331920 CRYBA4P53673 196 aa13.44□□□□□ -0.26
PTCH1-201ENST00000331920 IGF2BP2-AS1Q96M15 143 aa13.44□□□□□ -0.26
PTCH1-201ENST00000331920 TSSC4Q9Y5U2 329 aaPredicted RBP13.44□□□□□ -0.26
PTCH1-201ENST00000331920 DLEC1Q9Y238 1755 aa13.44□□□□□ -0.26
PTCH1-201ENST00000331920 DLEU1O43261 78 aa13.44□□□□□ -0.26
PTCH1-201ENST00000331920 GAGE7O76087 117 aa13.44□□□□□ -0.26
PTCH1-201ENST00000331920 GAGE12FP0CL80 117 aa13.44□□□□□ -0.26
PTCH1-201ENST00000331920 GAGE12GP0CL81 117 aa13.44□□□□□ -0.26
PTCH1-201ENST00000331920 GAGE12IP0CL82 117 aa13.44□□□□□ -0.26
PTCH1-201ENST00000331920 RNF166Q96A37 237 aaPredicted RBP13.44□□□□□ -0.26
PTCH1-201ENST00000331920 RNF114Q9Y508 228 aa13.44□□□□□ -0.26
PTCH1-201ENST00000331920 VWC2Q2TAL6 325 aa13.44□□□□□ -0.26
PTCH1-201ENST00000331920 LINC01590Q5TEZ4 76 aa13.44□□□□□ -0.26
PTCH1-201ENST00000331920 IL17RELQ6ZVW7 336 aa13.44□□□□□ -0.26
PTCH1-201ENST00000331920 TRPT1Q86TN4 253 aaKnown RBP13.43□□□□□ -0.26
PTCH1-201ENST00000331920 HIST3H2BBQ8N257 126 aa13.43□□□□□ -0.26
PTCH1-201ENST00000331920 RNF126Q9BV68 326 aa13.43□□□□□ -0.26
PTCH1-201ENST00000331920 MAPK1IP1LQ8NDC0 245 aa13.43□□□□□ -0.26
PTCH1-201ENST00000331920 PAX9P55771 341 aa13.43□□□□□ -0.26
PTCH1-201ENST00000331920 CT83Q5H943 113 aa13.43□□□□□ -0.26
PTCH1-201ENST00000331920 WFDC1Q9HC57 220 aa13.43□□□□□ -0.26
PTCH1-201ENST00000331920 SHANK3Q9BYB0 1731 aa13.43□□□□□ -0.26
PTCH1-201ENST00000331920 IGKV2D-24A0A075B6R9 120 aa13.42□□□□□ -0.26
PTCH1-201ENST00000331920 TNCP24821 2201 aa13.42□□□□□ -0.26
PTCH1-201ENST00000331920 IGKV1OR2-108A0A075B7D4 117 aa13.42□□□□□ -0.26
PTCH1-201ENST00000331920 LY75O60449 1722 aa13.42□□□□□ -0.26
PTCH1-201ENST00000331920 A8MWP6 167 aa13.42□□□□□ -0.26
PTCH1-201ENST00000331920 TMEM242Q9NWH2 141 aa13.42□□□□□ -0.26
PTCH1-201ENST00000331920 TRBV6-7A0A0A0MS04 114 aa13.42□□□□□ -0.26
PTCH1-201ENST00000331920 PARP14Q460N5 1801 aa13.42□□□□□ -0.26
PTCH1-201ENST00000331920 IGHV1-3A0A0C4DH29 117 aa13.42□□□□□ -0.26
PTCH1-201ENST00000331920 RNF222A6NCQ9 220 aa13.42□□□□□ -0.26
PTCH1-201ENST00000331920 C5orf67F2Z3F1 127 aa13.41□□□□□ -0.26
PTCH1-201ENST00000331920 PSPNO60542 156 aa13.41□□□□□ -0.26
PTCH1-201ENST00000331920 IGHV1-18A0A0C4DH31 117 aa13.41□□□□□ -0.26
PTCH1-201ENST00000331920 IGKV1-39P01597 117 aa13.41□□□□□ -0.26
PTCH1-201ENST00000331920 IGKV1D-39P04432 117 aa13.41□□□□□ -0.26
PTCH1-201ENST00000331920 TCF20Q9UGU0 1960 aaKnown RBP13.41□□□□□ -0.26
PTCH1-201ENST00000331920 SLC25A16P16260 332 aa13.41□□□□□ -0.26
PTCH1-201ENST00000331920 FAM231BA6NCW3 169 aa13.41□□□□□ -0.26
PTCH1-201ENST00000331920 J3QW42 95 aa13.41□□□□□ -0.26
PTCH1-201ENST00000331920 C8orf49Q96NF6 230 aa13.41□□□□□ -0.26
PTCH1-201ENST00000331920 ZMAT4Q9H898 229 aa13.41□□□□□ -0.26
PTCH1-201ENST00000331920 TNRC6AQ8NDV7 1962 aaKnown RBP13.41□□□□□ -0.26
PTCH1-201ENST00000331920 CFHR2P36980 270 aa13.41□□□□□ -0.26
PTCH1-201ENST00000331920 TRAV26-2A0A0B4J265 109 aa13.41□□□□□ -0.26
PTCH1-201ENST00000331920 ID3Q02535 119 aa13.4□□□□□ -0.26
PTCH1-201ENST00000331920 ANKRD29Q8N6D5 301 aa13.4□□□□□ -0.26
PTCH1-201ENST00000331920 RBBP6Q7Z6E9 1792 aaKnown RBP13.4□□□□□ -0.26
PTCH1-201ENST00000331920 RHPN1-AS1Q9BWJ2 59 aa13.4□□□□□ -0.26
PTCH1-201ENST00000331920 ZNF672Q499Z4 452 aaPredicted RBP13.4□□□□□ -0.26
PTCH1-201ENST00000331920 TREML4Q6UXN2 200 aa13.4□□□□□ -0.26
PTCH1-201ENST00000331920 NRXN3Q9Y4C0 1643 aa13.4□□□□□ -0.26
PTCH1-201ENST00000331920 C3orf79P0CE67 100 aa13.4□□□□□ -0.26
PTCH1-201ENST00000331920 C15orf53Q8NAA6 179 aa13.4□□□□□ -0.26
PTCH1-201ENST00000331920 DSCAML1Q8TD84 2053 aa13.39□□□□□ -0.27
PTCH1-201ENST00000331920 CD200R1LQ6Q8B3 271 aa13.39□□□□□ -0.27
PTCH1-201ENST00000331920 I3L3M4 83 aa13.39□□□□□ -0.27
PTCH1-201ENST00000331920 STRCP1A6NGW2 1772 aa13.39□□□□□ -0.27
PTCH1-201ENST00000331920 CARD19Q96LW7 228 aa13.39□□□□□ -0.27
PTCH1-201ENST00000331920 XCL1P47992 114 aa13.38□□□□□ -0.27
PTCH1-201ENST00000331920 TMEM243Q9BU79 118 aa13.38□□□□□ -0.27
PTCH1-201ENST00000331920 SPRR3Q9UBC9 169 aa13.38□□□□□ -0.27
PTCH1-201ENST00000331920 IGHV1-46P01743 117 aa13.38□□□□□ -0.27
PTCH1-201ENST00000331920 ZNRF2Q8NHG8 242 aa13.38□□□□□ -0.27
PTCH1-201ENST00000331920 RNF183Q96D59 192 aa13.38□□□□□ -0.27
PTCH1-201ENST00000331920 TRAV3A0A0B4J244 114 aa13.38□□□□□ -0.27
PTCH1-201ENST00000331920 IL18BPO95998 194 aa13.38□□□□□ -0.27
PTCH1-201ENST00000331920 UTF1Q5T230 341 aa13.38□□□□□ -0.27
PTCH1-201ENST00000331920 C1orf194Q5T5A4 169 aa13.38□□□□□ -0.27
PTCH1-201ENST00000331920 AGMATQ9BSE5 352 aa13.38□□□□□ -0.27
PTCH1-201ENST00000331920 HELZP42694 1942 aaKnown RBP13.38□□□□□ -0.27
PTCH1-201ENST00000331920 ARMS2P0C7Q2 107 aa13.38□□□□□ -0.27
PTCH1-201ENST00000331920 RMI2Q96E14 147 aa13.38□□□□□ -0.27
PTCH1-201ENST00000331920 NDUFC2O95298 119 aa13.38□□□□□ -0.27
PTCH1-201ENST00000331920 DENND4AQ7Z401 1863 aa13.38□□□□□ -0.27
PTCH1-201ENST00000331920 SS18L2Q9UHA2 77 aa13.38□□□□□ -0.27
PTCH1-201ENST00000331920 NEGR1Q7Z3B1 354 aa13.37□□□□□ -0.27
PTCH1-201ENST00000331920 GLRX5Q86SX6 157 aa13.37□□□□□ -0.27
PTCH1-201ENST00000331920 TNRC6CQ9HCJ0 1690 aaKnown RBP13.37□□□□□ -0.27
PTCH1-201ENST00000331920 FAM104BQ5XKR9 115 aa13.37□□□□□ -0.27
PTCH1-201ENST00000331920 GAGE12HA6NDE8 117 aa13.37□□□□□ -0.27
PTCH1-201ENST00000331920 IGLV2-23P01705 113 aa13.37□□□□□ -0.27
PTCH1-201ENST00000331920 HLA-DRB4P13762 266 aa13.37□□□□□ -0.27
PTCH1-201ENST00000331920 DSCR9P59020 149 aa13.37□□□□□ -0.27
PTCH1-201ENST00000331920 HLA-DRB4X5D2U9 266 aa13.37□□□□□ -0.27
PTCH1-201ENST00000331920 IGHV1-8P0DP01 117 aa13.37□□□□□ -0.27
PTCH1-201ENST00000331920 C9orf139Q6ZV77 190 aa13.37□□□□□ -0.27
PTCH1-201ENST00000331920 IGFBP3P17936 291 aaPredicted RBP13.36□□□□□ -0.27
PTCH1-201ENST00000331920 WBP1Q96G27 269 aa13.36□□□□□ -0.27
PTCH1-201ENST00000331920 RHODO00212 210 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms