RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 ASH1LQ9NR48 2969 aaKnown RBP10.82□□□□□ -0.68
TRAIP-201ENST00000331456 ZNF580Q9UK33 172 aa10.82□□□□□ -0.68
TRAIP-201ENST00000331456 ZFP30Q9Y2G7 519 aa10.82□□□□□ -0.68
TRAIP-201ENST00000331456 IZUMO1RA6ND01 250 aa10.82□□□□□ -0.68
TRAIP-201ENST00000331456 IGHV4-59P01825 116 aa10.82□□□□□ -0.68
TRAIP-201ENST00000331456 S100A2P29034 98 aa10.82□□□□□ -0.68
TRAIP-201ENST00000331456 ARL3P36405 182 aa10.82□□□□□ -0.68
TRAIP-201ENST00000331456 IER3P46695 156 aa10.82□□□□□ -0.68
TRAIP-201ENST00000331456 C1orf194Q5T5A4 169 aa10.82□□□□□ -0.68
TRAIP-201ENST00000331456 TRAV8-1A0A0A6YYK1 113 aa10.81□□□□□ -0.68
TRAIP-201ENST00000331456 XKRY2A2RUG3 117 aa10.81□□□□□ -0.68
TRAIP-201ENST00000331456 ZNF785A8K8V0 405 aa10.81□□□□□ -0.68
TRAIP-201ENST00000331456 BUB3O43684 328 aa10.81□□□□□ -0.68
TRAIP-201ENST00000331456 FSHBP01225 129 aa10.81□□□□□ -0.68
TRAIP-201ENST00000331456 IGLV2-11P01706 119 aa10.81□□□□□ -0.68
TRAIP-201ENST00000331456 P01737 135 aa10.81□□□□□ -0.68
TRAIP-201ENST00000331456 PF4V1P10720 104 aa10.81□□□□□ -0.68
TRAIP-201ENST00000331456 PSG3Q16557 428 aa10.81□□□□□ -0.68
TRAIP-201ENST00000331456 CYB5R2Q6BCY4 276 aa10.81□□□□□ -0.68
TRAIP-201ENST00000331456 C9orf139Q6ZV77 190 aa10.81□□□□□ -0.68
TRAIP-201ENST00000331456 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.81□□□□□ -0.682e-6■■■■□ 20
TRAIP-201ENST00000331456 A0A0G2JLM5 398 aa10.8□□□□□ -0.68
TRAIP-201ENST00000331456 MT-ND6P03923 174 aa10.8□□□□□ -0.68
TRAIP-201ENST00000331456 MEOX2P50222 304 aa10.8□□□□□ -0.68
TRAIP-201ENST00000331456 HIST3H2BBQ8N257 126 aa10.8□□□□□ -0.68
TRAIP-201ENST00000331456 TSKUQ8WUA8 353 aa10.8□□□□□ -0.68
TRAIP-201ENST00000331456 GNB1LQ9BYB4 327 aa10.8□□□□□ -0.68
TRAIP-201ENST00000331456 RPP21Q9H633 154 aaKnown RBP10.8□□□□□ -0.68
TRAIP-201ENST00000331456 NAT8BQ9UHF3 227 aa10.8□□□□□ -0.68
TRAIP-201ENST00000331456 PSG8Q9UQ74 426 aa10.8□□□□□ -0.68
TRAIP-201ENST00000331456 SMAD5-AS1Q9Y6J3 95 aa10.8□□□□□ -0.68
TRAIP-201ENST00000331456 A0A087X0K7 114 aa10.8□□□□□ -0.68
TRAIP-201ENST00000331456 CLPSL1A2RUU4 121 aa10.8□□□□□ -0.68
TRAIP-201ENST00000331456 FBLL1A6NHQ2 334 aaKnown RBP10.8□□□□□ -0.68
TRAIP-201ENST00000331456 CA1P00915 261 aaPredicted RBP10.8□□□□□ -0.68
TRAIP-201ENST00000331456 SMIM6P0DI80 62 aa10.8□□□□□ -0.68
TRAIP-201ENST00000331456 CBLN1P23435 193 aa10.8□□□□□ -0.68
TRAIP-201ENST00000331456 CT83Q5H943 113 aa10.8□□□□□ -0.68
TRAIP-201ENST00000331456 C12orf57Q99622 126 aa10.8□□□□□ -0.68
TRAIP-201ENST00000331456 MRPL18Q9H0U6 180 aaKnown RBP10.8□□□□□ -0.68
TRAIP-201ENST00000331456 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.79□□□□□ -0.68
TRAIP-201ENST00000331456 C19orf71A6NCJ1 209 aa10.79□□□□□ -0.68
TRAIP-201ENST00000331456 A8MWL6 223 aa10.79□□□□□ -0.68
TRAIP-201ENST00000331456 SNURFLB1AK76 121 aa10.79□□□□□ -0.68
TRAIP-201ENST00000331456 M0R3E3 92 aa10.79□□□□□ -0.68
TRAIP-201ENST00000331456 IGLV1-40P01703 118 aa10.79□□□□□ -0.68
TRAIP-201ENST00000331456 COA6Q5JTJ3 125 aaKnown RBP10.79□□□□□ -0.68
TRAIP-201ENST00000331456 GBGT1Q8N5D6 347 aa10.79□□□□□ -0.68
TRAIP-201ENST00000331456 PRSS22Q9GZN4 317 aa10.79□□□□□ -0.68
TRAIP-201ENST00000331456 ZNF331Q9NQX6 463 aaPredicted RBP10.79□□□□□ -0.68
TRAIP-201ENST00000331456 LRRK2Q5S007 2527 aa10.79□□□□□ -0.68
TRAIP-201ENST00000331456 FLNBO75369 2602 aaKnown RBP10.79□□□□□ -0.68
TRAIP-201ENST00000331456 SPINK4O60575 86 aa10.79□□□□□ -0.68
TRAIP-201ENST00000331456 GFI1BQ5VTD9 330 aa10.79□□□□□ -0.68
TRAIP-201ENST00000331456 Q6ZS46 218 aa10.79□□□□□ -0.68
TRAIP-201ENST00000331456 CIARTQ8N365 385 aaPredicted RBP10.79□□□□□ -0.68
TRAIP-201ENST00000331456 OR4B1Q8NGF8 309 aa10.79□□□□□ -0.68
TRAIP-201ENST00000331456 GPR61Q9BZJ8 451 aa10.79□□□□□ -0.68
TRAIP-201ENST00000331456 UTP20O75691 2785 aaKnown RBP10.78□□□□□ -0.68
TRAIP-201ENST00000331456 ANKRD17O75179 2603 aaKnown RBP10.78□□□□□ -0.68
TRAIP-201ENST00000331456 NDUFA4O00483 81 aa10.78□□□□□ -0.68
TRAIP-201ENST00000331456 SLC35B1P78383 322 aa10.78□□□□□ -0.68
TRAIP-201ENST00000331456 PDZD11Q5EBL8 140 aa10.78□□□□□ -0.68
TRAIP-201ENST00000331456 MRPL54Q6P161 138 aaKnown RBP10.78□□□□□ -0.68
TRAIP-201ENST00000331456 RASL11AQ6T310 242 aa10.78□□□□□ -0.68
TRAIP-201ENST00000331456 Q6YL49 198 aa10.78□□□□□ -0.68
TRAIP-201ENST00000331456 SLC50A1Q9BRV3 221 aa10.78□□□□□ -0.68
TRAIP-201ENST00000331456 VPREB3Q9UKI3 123 aa10.78□□□□□ -0.68
TRAIP-201ENST00000331456 RAB4BP61018 213 aa10.77□□□□□ -0.68
TRAIP-201ENST00000331456 CFHR3Q02985 330 aa10.77□□□□□ -0.68
TRAIP-201ENST00000331456 LINC00322Q6ZN03 302 aaPredicted RBP10.77□□□□□ -0.68
TRAIP-201ENST00000331456 U3KQE9 123 aa10.77□□□□□ -0.68
TRAIP-201ENST00000331456 IFITM10A6NMD0 228 aa10.77□□□□□ -0.69
TRAIP-201ENST00000331456 ZNF207O43670 478 aaKnown RBP10.77□□□□□ -0.69
TRAIP-201ENST00000331456 HLA-DQA1P01909 254 aa10.77□□□□□ -0.69
TRAIP-201ENST00000331456 FAM209BQ5JX69 171 aa10.77□□□□□ -0.69
TRAIP-201ENST00000331456 KRTAP1-3Q8IUG1 177 aa10.77□□□□□ -0.69
TRAIP-201ENST00000331456 NUP35Q8NFH5 326 aa10.77□□□□□ -0.69
TRAIP-201ENST00000331456 OR4X2Q8NGF9 303 aa10.77□□□□□ -0.69
TRAIP-201ENST00000331456 NEU1Q99519 415 aa10.77□□□□□ -0.69
TRAIP-201ENST00000331456 GFRA4Q9GZZ7 299 aa10.77□□□□□ -0.69
TRAIP-201ENST00000331456 KLK15Q9H2R5 256 aa10.77□□□□□ -0.69
TRAIP-201ENST00000331456 TENM4Q6N022 2769 aa10.76□□□□□ -0.69
TRAIP-201ENST00000331456 CR1P17927 2039 aa10.76□□□□□ -0.69
TRAIP-201ENST00000331456 IGHV3-66A0A0C4DH42 116 aa10.76□□□□□ -0.69
TRAIP-201ENST00000331456 HIGD1CA8MV81 97 aa10.76□□□□□ -0.69
TRAIP-201ENST00000331456 CHEK1O14757 476 aa10.76□□□□□ -0.69
TRAIP-201ENST00000331456 IGHV3-11P01762 117 aa10.76□□□□□ -0.69
TRAIP-201ENST00000331456 CT45A10P0DMU9 189 aa10.76□□□□□ -0.69
TRAIP-201ENST00000331456 SAPCD1Q5SSQ6 148 aa10.76□□□□□ -0.69
TRAIP-201ENST00000331456 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.76□□□□□ -0.69
TRAIP-201ENST00000331456 TMEM136Q6ZRR5 245 aa10.76□□□□□ -0.69
TRAIP-201ENST00000331456 WIPF2Q8TF74 440 aaPredicted RBP10.76□□□□□ -0.69
TRAIP-201ENST00000331456 PSMG3-AS1Q96PY0 264 aa10.76□□□□□ -0.69
TRAIP-201ENST00000331456 TMEM89A2RUT3 159 aa10.75□□□□□ -0.69
TRAIP-201ENST00000331456 FAM231BA6NCW3 169 aa10.75□□□□□ -0.69
TRAIP-201ENST00000331456 NPIPB6E9PJ23 425 aa10.75□□□□□ -0.69
TRAIP-201ENST00000331456 FABP4P15090 132 aa10.75□□□□□ -0.69
TRAIP-201ENST00000331456 ATP5L2Q7Z4Y8 100 aa10.75□□□□□ -0.69
TRAIP-201ENST00000331456 TEX29Q8N6K0 151 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms