RNA–Protein interactions for RNA: ENST00000329629.8

FNDC1-202, Transcript of fibronectin type III domain containing 1, humanhuman

TSL 1 (best)

Gene FNDC1, Length 6,034 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-202ENST00000329629 DTX1Q86Y01 620 aa11.47□□□□□ -0.57
FNDC1-202ENST00000329629 A0A0G2JNJ9 132 aa11.47□□□□□ -0.57
FNDC1-202ENST00000329629 EFNA4P52798 201 aa11.47□□□□□ -0.57
FNDC1-202ENST00000329629 Q9UFV3 132 aa11.47□□□□□ -0.57
FNDC1-202ENST00000329629 A0A0G2JRQ6 117 aa11.46□□□□□ -0.57
FNDC1-202ENST00000329629 SOCS3O14543 225 aa11.46□□□□□ -0.57
FNDC1-202ENST00000329629 CFHR2P36980 270 aa11.46□□□□□ -0.57
FNDC1-202ENST00000329629 GAGE1Q13065 139 aa11.46□□□□□ -0.57
FNDC1-202ENST00000329629 SPSB3Q6PJ21 355 aa11.46□□□□□ -0.58
FNDC1-202ENST00000329629 LIME1Q9H400 295 aa11.46□□□□□ -0.58
FNDC1-202ENST00000329629 GGNQ86UU5 652 aa11.46□□□□□ -0.58
FNDC1-202ENST00000329629 TP53TG1Q9Y2A0 90 aa11.46□□□□□ -0.58
FNDC1-202ENST00000329629 TMEM178BH3BS89 294 aa11.45□□□□□ -0.58
FNDC1-202ENST00000329629 MDS2Q8NDY4 140 aa11.45□□□□□ -0.58
FNDC1-202ENST00000329629 MGAMO43451 1857 aa11.45□□□□□ -0.58
FNDC1-202ENST00000329629 DOCK6Q96HP0 2047 aa11.45□□□□□ -0.58
FNDC1-202ENST00000329629 SNHG12Q9BXW3 62 aa11.45□□□□□ -0.58
FNDC1-202ENST00000329629 GAFA1Q96PS6 74 aa11.45□□□□□ -0.58
FNDC1-202ENST00000329629 BUB1B-PAK6H3BSN5 160 aa11.44□□□□□ -0.58
FNDC1-202ENST00000329629 DKK1O94907 266 aa11.44□□□□□ -0.58
FNDC1-202ENST00000329629 SLC25A16P16260 332 aa11.44□□□□□ -0.58
FNDC1-202ENST00000329629 PMVKQ15126 192 aa11.44□□□□□ -0.58
FNDC1-202ENST00000329629 MORN5Q5VZ52 161 aa11.44□□□□□ -0.58
FNDC1-202ENST00000329629 PNRC2Q9NPJ4 139 aaKnown RBP11.44□□□□□ -0.58
FNDC1-202ENST00000329629 H3BUX3 64 aa11.44□□□□□ -0.58
FNDC1-202ENST00000329629 K7ENP7 123 aa11.44□□□□□ -0.58
FNDC1-202ENST00000329629 COL4A6Q14031 1691 aa11.44□□□□□ -0.58
FNDC1-202ENST00000329629 C5orf64Q2M2E5 130 aa11.44□□□□□ -0.58
FNDC1-202ENST00000329629 GFRA4Q9GZZ7 299 aa11.44□□□□□ -0.58
FNDC1-202ENST00000329629 TMEM190Q8WZ59 177 aa11.44□□□□□ -0.58
FNDC1-202ENST00000329629 C9orf118A6NHY6 69 aa11.44□□□□□ -0.58
FNDC1-202ENST00000329629 KNCNA6PVL3 124 aa11.44□□□□□ -0.58
FNDC1-202ENST00000329629 CMC4P56277 68 aaPredicted RBP11.43□□□□□ -0.58
FNDC1-202ENST00000329629 Q6P435 159 aa11.43□□□□□ -0.58
FNDC1-202ENST00000329629 Q6ZS92 163 aa11.43□□□□□ -0.58
FNDC1-202ENST00000329629 LYPD1Q8N2G4 141 aa11.43□□□□□ -0.58
FNDC1-202ENST00000329629 ZDBF2Q9HCK1 2354 aa11.43□□□□□ -0.58
FNDC1-202ENST00000329629 NPSP0C0P6 89 aa11.43□□□□□ -0.58
FNDC1-202ENST00000329629 PIP4P2Q8N4L2 257 aa11.43□□□□□ -0.58
FNDC1-202ENST00000329629 SIGLEC9Q9Y336 463 aa11.43□□□□□ -0.58
FNDC1-202ENST00000329629 DEFB130BP0DP73 79 aa11.43□□□□□ -0.58
FNDC1-202ENST00000329629 DEFB130AP0DP74 79 aa11.43□□□□□ -0.58
FNDC1-202ENST00000329629 CFHR3Q02985 330 aa11.43□□□□□ -0.58
FNDC1-202ENST00000329629 RNASE2P10153 161 aaKnown RBP11.43□□□□□ -0.58
FNDC1-202ENST00000329629 TRPT1Q86TN4 253 aaKnown RBP11.43□□□□□ -0.58
FNDC1-202ENST00000329629 RHPN1-AS1Q9BWJ2 59 aa11.43□□□□□ -0.58
FNDC1-202ENST00000329629 PFN2P35080 140 aa11.43□□□□□ -0.58
FNDC1-202ENST00000329629 Q0VG73 95 aa11.43□□□□□ -0.58
FNDC1-202ENST00000329629 IL17RELQ6ZVW7 336 aa11.43□□□□□ -0.58
FNDC1-202ENST00000329629 IGHV3-16A0A0C4DH30 117 aa11.42□□□□□ -0.58
FNDC1-202ENST00000329629 LYL1P12980 280 aa11.42□□□□□ -0.58
FNDC1-202ENST00000329629 C18orf32Q8TCD1 76 aa11.42□□□□□ -0.58
FNDC1-202ENST00000329629 HAPLN4Q86UW8 402 aa11.42□□□□□ -0.58
FNDC1-202ENST00000329629 DOCK4Q8N1I0 1966 aa11.42□□□□□ -0.58
FNDC1-202ENST00000329629 TRAV26-2A0A0B4J265 109 aa11.42□□□□□ -0.58
FNDC1-202ENST00000329629 C9JQL5 133 aa11.42□□□□□ -0.58
FNDC1-202ENST00000329629 DEFB121Q5J5C9 76 aa11.41□□□□□ -0.58
FNDC1-202ENST00000329629 MINOS1Q5TGZ0 78 aa11.41□□□□□ -0.58
FNDC1-202ENST00000329629 MINOS1-NBL1R4GNA1 71 aa11.41□□□□□ -0.58
FNDC1-202ENST00000329629 APC2O95996 2303 aa11.41□□□□□ -0.58
FNDC1-202ENST00000329629 IFITM1P13164 125 aa11.41□□□□□ -0.58
FNDC1-202ENST00000329629 QRFPP83859 136 aa11.41□□□□□ -0.58
FNDC1-202ENST00000329629 SP5Q6BEB4 398 aaPredicted RBP11.41□□□□□ -0.58
FNDC1-202ENST00000329629 Q6ZRM9 215 aa11.41□□□□□ -0.58
FNDC1-202ENST00000329629 NEGR1Q7Z3B1 354 aa11.41□□□□□ -0.58
FNDC1-202ENST00000329629 KLHL30-AS1Q8NEE0 82 aa11.41□□□□□ -0.58
FNDC1-202ENST00000329629 RALGAPA1Q6GYQ0 2036 aa11.41□□□□□ -0.58
FNDC1-202ENST00000329629 TPRP12270 2363 aaKnown RBP11.41□□□□□ -0.58
FNDC1-202ENST00000329629 ZSWIM8A7E2V4 1837 aa11.41□□□□□ -0.58
FNDC1-202ENST00000329629 KLHDC3Q9BQ90 382 aa11.41□□□□□ -0.58
FNDC1-202ENST00000329629 TRACP01848 142 aa11.41□□□□□ -0.58
FNDC1-202ENST00000329629 HAMPP81172 84 aa11.41□□□□□ -0.58
FNDC1-202ENST00000329629 RNF5Q99942 180 aa11.41□□□□□ -0.58
FNDC1-202ENST00000329629 FAM223BA6NKX1 122 aa11.4□□□□□ -0.58
FNDC1-202ENST00000329629 MST1LQ2TV78 715 aa11.4□□□□□ -0.58
FNDC1-202ENST00000329629 FAM223AQ8IWN6 122 aa11.4□□□□□ -0.58
FNDC1-202ENST00000329629 CYYR1Q96J86 154 aa11.4□□□□□ -0.58
FNDC1-202ENST00000329629 FNDC1Q4ZHG4 1894 aaPredicted RBP11.4□□□□□ -0.58
FNDC1-202ENST00000329629 LYPD2Q6UXB3 125 aa11.4□□□□□ -0.58
FNDC1-202ENST00000329629 TMEM75Q8N9X5 138 aa11.4□□□□□ -0.58
FNDC1-202ENST00000329629 SHANK2-AS3Q9BTD1 123 aa11.4□□□□□ -0.58
FNDC1-202ENST00000329629 TRAV12-1A0A0B4J245 112 aa11.4□□□□□ -0.58
FNDC1-202ENST00000329629 TRAV25A0A0B4J276 109 aa11.4□□□□□ -0.58
FNDC1-202ENST00000329629 GAGE12JA6NER3 117 aa11.4□□□□□ -0.58
FNDC1-202ENST00000329629 GAGE4Q13068 117 aa11.4□□□□□ -0.58
FNDC1-202ENST00000329629 GAGE5Q13069 117 aa11.4□□□□□ -0.58
FNDC1-202ENST00000329629 C20orf144Q9BQM9 153 aa11.4□□□□□ -0.58
FNDC1-202ENST00000329629 KLK9Q9UKQ9 250 aa11.4□□□□□ -0.58
FNDC1-202ENST00000329629 PPDPFLQ8WWR9 84 aa11.4□□□□□ -0.58
FNDC1-202ENST00000329629 ZNRD1Q9P1U0 126 aa11.4□□□□□ -0.58
FNDC1-202ENST00000329629 IGKV1D-17A0A075B6S4 117 aa11.4□□□□□ -0.59
FNDC1-202ENST00000329629 MBD3L4A6NDZ8 208 aaPredicted RBP11.4□□□□□ -0.59
FNDC1-202ENST00000329629 MBD3L3A6NE82 208 aaPredicted RBP11.4□□□□□ -0.59
FNDC1-202ENST00000329629 MBD3L5A6NJ08 208 aaPredicted RBP11.4□□□□□ -0.59
FNDC1-202ENST00000329629 MBD3L2Q8NHZ7 208 aaPredicted RBP11.4□□□□□ -0.59
FNDC1-202ENST00000329629 B4DSR2 109 aa11.39□□□□□ -0.59
FNDC1-202ENST00000329629 IGKV1-16P04430 117 aa11.39□□□□□ -0.59
FNDC1-202ENST00000329629 HOXD3P31249 432 aaPredicted RBP11.39□□□□□ -0.59
FNDC1-202ENST00000329629 SLAQ13239 276 aa11.39□□□□□ -0.59
FNDC1-202ENST00000329629 FGF6P10767 208 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms