RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 CST9LQ9H4G1 147 aa13.77□□□□□ -0.21
PTP4A3-201ENST00000329397 LEPROTL1O95214 131 aa13.77□□□□□ -0.21
PTP4A3-201ENST00000329397 IGLV1-47P01700 117 aa13.77□□□□□ -0.21
PTP4A3-201ENST00000329397 Q8NA96 180 aa13.77□□□□□ -0.21
PTP4A3-201ENST00000329397 RASL11BQ9BPW5 248 aa13.77□□□□□ -0.21
PTP4A3-201ENST00000329397 MUC21A0A0G2JKD1 596 aa13.76□□□□□ -0.21
PTP4A3-201ENST00000329397 MUC21A0A140T8X8 626 aa13.76□□□□□ -0.21
PTP4A3-201ENST00000329397 BUB1B-PAK6H3BSN5 160 aa13.76□□□□□ -0.21
PTP4A3-201ENST00000329397 IGKV1-17P01599 117 aa13.76□□□□□ -0.21
PTP4A3-201ENST00000329397 ARMS2P0C7Q2 107 aa13.76□□□□□ -0.21
PTP4A3-201ENST00000329397 MUC21Q5SSG8 566 aa13.76□□□□□ -0.21
PTP4A3-201ENST00000329397 ZC2HC1AQ96GY0 325 aa13.76□□□□□ -0.21
PTP4A3-201ENST00000329397 COL6A6A6NMZ7 2263 aa13.76□□□□□ -0.21
PTP4A3-201ENST00000329397 CNIH1O95406 144 aa13.76□□□□□ -0.21
PTP4A3-201ENST00000329397 CRYBA4P53673 196 aa13.76□□□□□ -0.21
PTP4A3-201ENST00000329397 RPEQ96AT9 228 aa13.76□□□□□ -0.21
PTP4A3-201ENST00000329397 SYS1-DBNDD2H3BUS1 97 aa13.75□□□□□ -0.21
PTP4A3-201ENST00000329397 ASCL5Q7RTU5 278 aa13.75□□□□□ -0.21
PTP4A3-201ENST00000329397 C8orf31Q8N9H6 132 aa13.75□□□□□ -0.21
PTP4A3-201ENST00000329397 HILPDAQ9Y5L2 63 aa13.75□□□□□ -0.21
PTP4A3-201ENST00000329397 IGF2RP11717 2491 aa13.75□□□□□ -0.21
PTP4A3-201ENST00000329397 RALYQ9UKM9 306 aaKnown RBP13.75□□□□□ -0.21
PTP4A3-201ENST00000329397 TMSB15BA0A087X1C1 80 aa13.74□□□□□ -0.21
PTP4A3-201ENST00000329397 I3L2K1 104 aa13.74□□□□□ -0.21
PTP4A3-201ENST00000329397 LINC01560Q8TB33 94 aa13.74□□□□□ -0.21
PTP4A3-201ENST00000329397 TMUB1Q9BVT8 246 aa13.74□□□□□ -0.21
PTP4A3-201ENST00000329397 TCTAP57738 103 aa13.74□□□□□ -0.21
PTP4A3-201ENST00000329397 MPV17L2Q567V2 206 aa13.74□□□□□ -0.21
PTP4A3-201ENST00000329397 ONECUT1Q9UBC0 465 aa13.74□□□□□ -0.21
PTP4A3-201ENST00000329397 KAAG1Q9UBP8 84 aa13.74□□□□□ -0.21
PTP4A3-201ENST00000329397 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.73□□□□□ -0.21
PTP4A3-201ENST00000329397 HTR1DP28221 377 aa13.73□□□□□ -0.21
PTP4A3-201ENST00000329397 GRNP28799 593 aaKnown RBP13.73□□□□□ -0.21
PTP4A3-201ENST00000329397 OTORQ9NRC9 128 aa13.73□□□□□ -0.21
PTP4A3-201ENST00000329397 ZNF492Q9P255 531 aa13.73□□□□□ -0.21
PTP4A3-201ENST00000329397 TRAV26-1A0A087WT03 109 aa13.73□□□□□ -0.21
PTP4A3-201ENST00000329397 TIMM23O14925 209 aa13.73□□□□□ -0.21
PTP4A3-201ENST00000329397 APOHP02749 345 aaPredicted RBP13.73□□□□□ -0.21
PTP4A3-201ENST00000329397 PVRIGQ6DKI7 326 aa13.73□□□□□ -0.21
PTP4A3-201ENST00000329397 SMPXQ9UHP9 88 aa13.73□□□□□ -0.21
PTP4A3-201ENST00000329397 MRPS16Q9Y3D3 137 aaKnown RBP13.73□□□□□ -0.21
PTP4A3-201ENST00000329397 PPIAL4CA0A0B4J2A2 164 aa13.72□□□□□ -0.21
PTP4A3-201ENST00000329397 PPIAL4GP0DN37 164 aa13.72□□□□□ -0.21
PTP4A3-201ENST00000329397 FOXE3Q13461 319 aa13.72□□□□□ -0.21
PTP4A3-201ENST00000329397 OVOL3O00110 214 aa13.72□□□□□ -0.21
PTP4A3-201ENST00000329397 SNAI2O43623 268 aa13.72□□□□□ -0.21
PTP4A3-201ENST00000329397 IL4P05112 153 aa13.72□□□□□ -0.21
PTP4A3-201ENST00000329397 C8orf49Q96NF6 230 aa13.72□□□□□ -0.21
PTP4A3-201ENST00000329397 K7EIM0 57 aa13.71□□□□□ -0.21
PTP4A3-201ENST00000329397 IGHV3-23P01764 117 aa13.71□□□□□ -0.21
PTP4A3-201ENST00000329397 FAM106CPP0CH98 169 aa13.71□□□□□ -0.21
PTP4A3-201ENST00000329397 CEACAM3P40198 252 aa13.71□□□□□ -0.21
PTP4A3-201ENST00000329397 FXYD7P58549 80 aa13.71□□□□□ -0.21
PTP4A3-201ENST00000329397 ARF6P62330 175 aa13.71□□□□□ -0.21
PTP4A3-201ENST00000329397 KLRD1Q13241 179 aa13.71□□□□□ -0.21
PTP4A3-201ENST00000329397 FAM106AQ4KMX7 169 aa13.71□□□□□ -0.21
PTP4A3-201ENST00000329397 NGBQ9NPG2 151 aa13.71□□□□□ -0.21
PTP4A3-201ENST00000329397 IGHV3OR16-8A0A075B7F1 116 aa13.71□□□□□ -0.21
PTP4A3-201ENST00000329397 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.71□□□□□ -0.21
PTP4A3-201ENST00000329397 A0A1B0GV72 72 aa13.71□□□□□ -0.21
PTP4A3-201ENST00000329397 CRIP1P50238 77 aa13.71□□□□□ -0.21
PTP4A3-201ENST00000329397 PLP1P60201 277 aa13.71□□□□□ -0.21
PTP4A3-201ENST00000329397 CT83Q5H943 113 aa13.71□□□□□ -0.21
PTP4A3-201ENST00000329397 NPIPB6E9PJ23 425 aa13.71□□□□□ -0.22
PTP4A3-201ENST00000329397 BRI3O95415 125 aa13.71□□□□□ -0.22
PTP4A3-201ENST00000329397 FCGR2BP31994 310 aaPredicted RBP13.71□□□□□ -0.22
PTP4A3-201ENST00000329397 MUC15Q8N387 334 aa13.71□□□□□ -0.22
PTP4A3-201ENST00000329397 MEGF9Q9H1U4 602 aa13.71□□□□□ -0.22
PTP4A3-201ENST00000329397 HIF1ANQ9NWT6 349 aa13.71□□□□□ -0.22
PTP4A3-201ENST00000329397 JKAMPQ9P055 326 aa13.71□□□□□ -0.22
PTP4A3-201ENST00000329397 COX11Q9Y6N1 276 aa13.71□□□□□ -0.22
PTP4A3-201ENST00000329397 TRBV19A0A075B6N1 114 aa13.7□□□□□ -0.22
PTP4A3-201ENST00000329397 LOC389332A0A1B0GUA5 103 aa13.69□□□□□ -0.22
PTP4A3-201ENST00000329397 NUDT3O95989 172 aa13.69□□□□□ -0.22
PTP4A3-201ENST00000329397 SIGLEC15Q6ZMC9 328 aa13.69□□□□□ -0.22
PTP4A3-201ENST00000329397 CELSR1Q9NYQ6 3014 aa13.69□□□□□ -0.22
PTP4A3-201ENST00000329397 IGHV2-70DA0A0C4DH43 119 aa13.69□□□□□ -0.22
PTP4A3-201ENST00000329397 GNG7O60262 68 aa13.69□□□□□ -0.22
PTP4A3-201ENST00000329397 HLA-DRB1P01911 266 aa13.69□□□□□ -0.22
PTP4A3-201ENST00000329397 RBPJQ06330 500 aa13.69□□□□□ -0.22
PTP4A3-201ENST00000329397 SAMD13Q5VXD3 122 aa13.69□□□□□ -0.22
PTP4A3-201ENST00000329397 IGFL4Q6B9Z1 124 aa13.69□□□□□ -0.22
PTP4A3-201ENST00000329397 CHCHD1Q96BP2 118 aaKnown RBP13.69□□□□□ -0.22
PTP4A3-201ENST00000329397 PSG8Q9UQ74 426 aa13.69□□□□□ -0.22
PTP4A3-201ENST00000329397 IGHV3-35A0A0C4DH35 117 aa13.68□□□□□ -0.22
PTP4A3-201ENST00000329397 A0A1B0GUT8 65 aa13.68□□□□□ -0.22
PTP4A3-201ENST00000329397 FAM90A27PA6NNH2 459 aa13.68□□□□□ -0.22
PTP4A3-201ENST00000329397 NCR2O95944 276 aa13.68□□□□□ -0.22
PTP4A3-201ENST00000329397 CLEC3BP05452 202 aa13.68□□□□□ -0.22
PTP4A3-201ENST00000329397 LOXL1Q08397 574 aaPredicted RBP13.68□□□□□ -0.22
PTP4A3-201ENST00000329397 HES1Q14469 280 aa13.68□□□□□ -0.22
PTP4A3-201ENST00000329397 GFRA4Q9GZZ7 299 aa13.68□□□□□ -0.22
PTP4A3-201ENST00000329397 BPIFA4PQ86YQ2 179 aa13.68□□□□□ -0.22
PTP4A3-201ENST00000329397 ZNF491Q8N8L2 437 aa13.68□□□□□ -0.22
PTP4A3-201ENST00000329397 ZNF738Q8NE65 137 aa13.68□□□□□ -0.22
PTP4A3-201ENST00000329397 RNF125Q96EQ8 232 aa13.68□□□□□ -0.22
PTP4A3-201ENST00000329397 NDFIP1Q9BT67 221 aa13.68□□□□□ -0.22
PTP4A3-201ENST00000329397 HAX1O00165 279 aa13.67□□□□□ -0.22
PTP4A3-201ENST00000329397 CRXO43186 299 aaPredicted RBP13.67□□□□□ -0.22
PTP4A3-201ENST00000329397 SHANK2-AS3Q9BTD1 123 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms