RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 TRBV20OR9-2A0A075B6H5 130 aa12.75□□□□□ -0.37
SYNM-201ENST00000328642 A0A1B0GUT8 65 aa12.75□□□□□ -0.37
SYNM-201ENST00000328642 PRR20EP86478 221 aa12.75□□□□□ -0.37
SYNM-201ENST00000328642 PRR20CP86479 221 aa12.75□□□□□ -0.37
SYNM-201ENST00000328642 PRR20DP86480 221 aa12.75□□□□□ -0.37
SYNM-201ENST00000328642 PRR20BP86481 221 aa12.75□□□□□ -0.37
SYNM-201ENST00000328642 PRR20AP86496 221 aa12.75□□□□□ -0.37
SYNM-201ENST00000328642 FAM106AQ4KMX7 169 aa12.75□□□□□ -0.37
SYNM-201ENST00000328642 PARD6GQ9BYG4 376 aaPredicted RBP12.75□□□□□ -0.37
SYNM-201ENST00000328642 BEX4Q9NWD9 120 aaPredicted RBP12.75□□□□□ -0.37
SYNM-201ENST00000328642 M0R1W7 72 aa12.75□□□□□ -0.37
SYNM-201ENST00000328642 DDTP30046 118 aa12.75□□□□□ -0.37
SYNM-201ENST00000328642 TMEM95Q3KNT9 176 aa12.75□□□□□ -0.37
SYNM-201ENST00000328642 LCN12Q6JVE5 192 aa12.75□□□□□ -0.37
SYNM-201ENST00000328642 SLC25A2Q9BXI2 301 aa12.75□□□□□ -0.37
SYNM-201ENST00000328642 COL5A1P20908 1838 aaPredicted RBP12.74□□□□□ -0.37
SYNM-201ENST00000328642 PKIAP61925 76 aa12.74□□□□□ -0.37
SYNM-201ENST00000328642 NCR2O95944 276 aa12.74□□□□□ -0.37
SYNM-201ENST00000328642 CDPF1Q6NVV7 123 aa12.74□□□□□ -0.37
SYNM-201ENST00000328642 OTORQ9NRC9 128 aa12.74□□□□□ -0.37
SYNM-201ENST00000328642 OSTCQ9NRP0 149 aa12.74□□□□□ -0.37
SYNM-201ENST00000328642 DSCAML1Q8TD84 2053 aa12.74□□□□□ -0.37
SYNM-201ENST00000328642 BMI1P35226 326 aa12.74□□□□□ -0.37
SYNM-201ENST00000328642 PVRIGQ6DKI7 326 aa12.74□□□□□ -0.37
SYNM-201ENST00000328642 LSM4Q9Y4Z0 139 aaKnown RBP12.74□□□□□ -0.37
SYNM-201ENST00000328642 DCHS1Q96JQ0 3298 aa12.74□□□□□ -0.37
SYNM-201ENST00000328642 PSG9Q00887 426 aa12.73□□□□□ -0.37
SYNM-201ENST00000328642 KLHDC1Q8N7A1 406 aa12.73□□□□□ -0.37
SYNM-201ENST00000328642 SPRY2O43597 315 aa12.73□□□□□ -0.37
SYNM-201ENST00000328642 COX19Q49B96 90 aa12.73□□□□□ -0.37
SYNM-201ENST00000328642 Q8N7P7 452 aa12.73□□□□□ -0.37
SYNM-201ENST00000328642 NUP35Q8NFH5 326 aa12.73□□□□□ -0.37
SYNM-201ENST00000328642 ITLN2Q8WWU7 325 aaPredicted RBP12.73□□□□□ -0.37
SYNM-201ENST00000328642 CDC42EP3Q9UKI2 254 aa12.73□□□□□ -0.37
SYNM-201ENST00000328642 PHLDA3Q9Y5J5 127 aa12.73□□□□□ -0.37
SYNM-201ENST00000328642 IZUMO1RA6ND01 250 aa12.73□□□□□ -0.37
SYNM-201ENST00000328642 PAX8Q06710 450 aa12.73□□□□□ -0.37
SYNM-201ENST00000328642 MAP1LC3CQ9BXW4 147 aa12.73□□□□□ -0.37
SYNM-201ENST00000328642 TCAPO15273 167 aa12.72□□□□□ -0.37
SYNM-201ENST00000328642 EVI2AP22794 236 aa12.72□□□□□ -0.37
SYNM-201ENST00000328642 HINT1P49773 126 aaPredicted RBP12.72□□□□□ -0.37
SYNM-201ENST00000328642 SPATA45Q537H7 98 aa12.72□□□□□ -0.37
SYNM-201ENST00000328642 LINC00311Q8N616 119 aa12.72□□□□□ -0.37
SYNM-201ENST00000328642 NRN1Q9NPD7 142 aa12.72□□□□□ -0.37
SYNM-201ENST00000328642 IGHV4-30-2A0A087WSY4 118 aa12.72□□□□□ -0.37
SYNM-201ENST00000328642 VAMP3Q15836 100 aa12.72□□□□□ -0.37
SYNM-201ENST00000328642 PATE2Q6UY27 113 aa12.72□□□□□ -0.37
SYNM-201ENST00000328642 TMEM116Q8NCL8 245 aa12.72□□□□□ -0.37
SYNM-201ENST00000328642 SOX21Q9Y651 276 aaPredicted RBP12.72□□□□□ -0.37
SYNM-201ENST00000328642 K7EN84 100 aa12.72□□□□□ -0.37
SYNM-201ENST00000328642 APOHP02749 345 aaPredicted RBP12.72□□□□□ -0.37
SYNM-201ENST00000328642 IGLC1P0CG04 106 aa12.72□□□□□ -0.37
SYNM-201ENST00000328642 POU2AF1Q16633 256 aa12.72□□□□□ -0.37
SYNM-201ENST00000328642 RBPMS2Q6ZRY4 209 aaKnown RBP12.72□□□□□ -0.37
SYNM-201ENST00000328642 Q71RC1 249 aaPredicted RBP12.72□□□□□ -0.37
SYNM-201ENST00000328642 ERASQ7Z444 233 aa12.72□□□□□ -0.37
SYNM-201ENST00000328642 IGHV4-39P01824 125 aa12.71□□□□□ -0.37
SYNM-201ENST00000328642 RNASE4P34096 147 aaKnown RBP12.71□□□□□ -0.37
SYNM-201ENST00000328642 NMUP48645 174 aa12.71□□□□□ -0.37
SYNM-201ENST00000328642 FMC1Q96HJ9 113 aa12.71□□□□□ -0.37
SYNM-201ENST00000328642 IGHV2-70DA0A0C4DH43 119 aa12.71□□□□□ -0.37
SYNM-201ENST00000328642 PAFAH1B2P68402 229 aa12.71□□□□□ -0.37
SYNM-201ENST00000328642 TMEM75Q8N9X5 138 aa12.71□□□□□ -0.37
SYNM-201ENST00000328642 NCOR1P1Q9H4R4 102 aa12.71□□□□□ -0.37
SYNM-201ENST00000328642 TMEM242Q9NWH2 141 aa12.71□□□□□ -0.37
SYNM-201ENST00000328642 ZNF688P0C7X2 276 aa12.71□□□□□ -0.38
SYNM-201ENST00000328642 FAM162BQ5T6X4 162 aa12.71□□□□□ -0.38
SYNM-201ENST00000328642 A0A1W2PS18 150 aa12.71□□□□□ -0.38
SYNM-201ENST00000328642 SMKR1H3BMG3 65 aa12.71□□□□□ -0.38
SYNM-201ENST00000328642 OVOL3O00110 214 aa12.71□□□□□ -0.38
SYNM-201ENST00000328642 IGHV4-38-2P0DP08 117 aa12.71□□□□□ -0.38
SYNM-201ENST00000328642 FOLR2P14207 255 aa12.71□□□□□ -0.38
SYNM-201ENST00000328642 MOB4Q9Y3A3 225 aa12.71□□□□□ -0.38
SYNM-201ENST00000328642 B4DSR2 109 aa12.7□□□□□ -0.38
SYNM-201ENST00000328642 F2Z2F3 143 aa12.7□□□□□ -0.38
SYNM-201ENST00000328642 IGLV1-47P01700 117 aa12.7□□□□□ -0.38
SYNM-201ENST00000328642 P0C879 139 aa12.7□□□□□ -0.38
SYNM-201ENST00000328642 UBE2E1P51965 193 aa12.7□□□□□ -0.38
SYNM-201ENST00000328642 BLCAPP62952 87 aa12.7□□□□□ -0.38
SYNM-201ENST00000328642 MINOS1Q5TGZ0 78 aa12.7□□□□□ -0.38
SYNM-201ENST00000328642 MINOS1-NBL1R4GNA1 71 aa12.7□□□□□ -0.38
SYNM-201ENST00000328642 TMEM191AQ9H0A3 160 aa12.7□□□□□ -0.38
SYNM-201ENST00000328642 AP5S1Q9NUS5 200 aa12.7□□□□□ -0.38
SYNM-201ENST00000328642 RNF151Q2KHN1 245 aa12.7□□□□□ -0.38
SYNM-201ENST00000328642 C8orf49Q96NF6 230 aa12.7□□□□□ -0.38
SYNM-201ENST00000328642 YAE1D1Q9NRH1 226 aa12.7□□□□□ -0.38
SYNM-201ENST00000328642 CBY3A6NI87 242 aa12.69□□□□□ -0.38
SYNM-201ENST00000328642 MSMBP08118 114 aa12.69□□□□□ -0.38
SYNM-201ENST00000328642 FOXL1Q12952 345 aa12.69□□□□□ -0.38
SYNM-201ENST00000328642 SAPCD1Q5SSQ6 148 aa12.69□□□□□ -0.38
SYNM-201ENST00000328642 IGHV2-5P01817 119 aa12.69□□□□□ -0.38
SYNM-201ENST00000328642 PTTG1IPP53801 180 aa12.69□□□□□ -0.38
SYNM-201ENST00000328642 EBLN2Q6P2I7 272 aa12.69□□□□□ -0.38
SYNM-201ENST00000328642 DYNAPQ8N1N2 210 aa12.69□□□□□ -0.38
SYNM-201ENST00000328642 FER1L6-AS1Q8NA97 138 aa12.69□□□□□ -0.38
SYNM-201ENST00000328642 TACC2O95359 2948 aa12.69□□□□□ -0.38
SYNM-201ENST00000328642 M0R143 59 aa12.68□□□□□ -0.38
SYNM-201ENST00000328642 LINC01548A6NM66 108 aa12.68□□□□□ -0.38
SYNM-201ENST00000328642 OR4X2Q8NGF9 303 aa12.68□□□□□ -0.38
SYNM-201ENST00000328642 TSKUQ8WUA8 353 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms