RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 DKK2Q9UBU2 259 aa13.37□□□□□ -0.27
SMAD3-201ENST00000327367 ALPK2Q86TB3 2170 aa13.37□□□□□ -0.27
SMAD3-201ENST00000327367 CRYGSP22914 178 aa13.37□□□□□ -0.27
SMAD3-201ENST00000327367 MRPL51Q4U2R6 128 aaKnown RBP13.37□□□□□ -0.27
SMAD3-201ENST00000327367 IL17RELQ6ZVW7 336 aa13.37□□□□□ -0.27
SMAD3-201ENST00000327367 IGHV1-46P01743 117 aa13.36□□□□□ -0.27
SMAD3-201ENST00000327367 NRN1LQ496H8 165 aa13.36□□□□□ -0.27
SMAD3-201ENST00000327367 RNASE13Q5GAN3 156 aaKnown RBP13.36□□□□□ -0.27
SMAD3-201ENST00000327367 SPANXA1Q9NS26 97 aa13.36□□□□□ -0.27
SMAD3-201ENST00000327367 RGPD3A6NKT7 1758 aaPredicted RBP13.36□□□□□ -0.27
SMAD3-201ENST00000327367 RGPD4Q7Z3J3 1758 aa13.36□□□□□ -0.27
SMAD3-201ENST00000327367 IGHV1-3A0A0C4DH29 117 aa13.36□□□□□ -0.27
SMAD3-201ENST00000327367 EFNA2O43921 213 aa13.36□□□□□ -0.27
SMAD3-201ENST00000327367 C2orf66Q6UXQ4 117 aa13.36□□□□□ -0.27
SMAD3-201ENST00000327367 GBF1Q92538 1859 aa13.36□□□□□ -0.27
SMAD3-201ENST00000327367 IGHV3-38A0A0C4DH36 116 aa13.36□□□□□ -0.27
SMAD3-201ENST00000327367 MRPL35Q9NZE8 188 aaKnown RBP13.35□□□□□ -0.27
SMAD3-201ENST00000327367 DOCK9Q9BZ29 2069 aa13.35□□□□□ -0.27
SMAD3-201ENST00000327367 VMO1Q7Z5L0 202 aa13.35□□□□□ -0.27
SMAD3-201ENST00000327367 H0YJW9 148 aa13.35□□□□□ -0.27
SMAD3-201ENST00000327367 CRLF1O75462 422 aa13.35□□□□□ -0.27
SMAD3-201ENST00000327367 RNASE8Q8TDE3 154 aaKnown RBP13.35□□□□□ -0.27
SMAD3-201ENST00000327367 NEU4Q8WWR8 484 aaPredicted RBP13.35□□□□□ -0.27
SMAD3-201ENST00000327367 GFRA4Q9GZZ7 299 aa13.35□□□□□ -0.27
SMAD3-201ENST00000327367 EFNA4P52798 201 aa13.35□□□□□ -0.27
SMAD3-201ENST00000327367 C12orf74Q32Q52 190 aa13.35□□□□□ -0.27
SMAD3-201ENST00000327367 UTF1Q5T230 341 aa13.35□□□□□ -0.27
SMAD3-201ENST00000327367 PRO1854Q9UHT4 67 aa13.35□□□□□ -0.27
SMAD3-201ENST00000327367 QRFPP83859 136 aa13.34□□□□□ -0.27
SMAD3-201ENST00000327367 MSRB2Q9Y3D2 182 aa13.34□□□□□ -0.27
SMAD3-201ENST00000327367 CLPSL1A2RUU4 121 aa13.34□□□□□ -0.27
SMAD3-201ENST00000327367 IGHG3P01860 377 aa13.34□□□□□ -0.27
SMAD3-201ENST00000327367 SYNJ2BPP57105 145 aa13.34□□□□□ -0.27
SMAD3-201ENST00000327367 V9GYV3 84 aa13.34□□□□□ -0.27
SMAD3-201ENST00000327367 MAP1BP46821 2468 aaKnown RBP13.34□□□□□ -0.27
SMAD3-201ENST00000327367 SPRR3Q9UBC9 169 aa13.34□□□□□ -0.27
SMAD3-201ENST00000327367 IGLC7A0M8Q6 106 aa13.34□□□□□ -0.27
SMAD3-201ENST00000327367 FAM104BQ5XKR9 115 aa13.34□□□□□ -0.27
SMAD3-201ENST00000327367 IGHG4P01861 327 aa13.33□□□□□ -0.27
SMAD3-201ENST00000327367 SRSF7Q16629 238 aaKnown RBP eCLIP13.33□□□□□ -0.272e-9■■■□□ 16.9
SMAD3-201ENST00000327367 SIGLEC8Q9NYZ4 499 aa13.33□□□□□ -0.27
SMAD3-201ENST00000327367 KLK9Q9UKQ9 250 aa13.33□□□□□ -0.27
SMAD3-201ENST00000327367 MYOFQ9NZM1 2061 aa13.33□□□□□ -0.28
SMAD3-201ENST00000327367 STRCP1A6NGW2 1772 aa13.33□□□□□ -0.28
SMAD3-201ENST00000327367 TEX48A0A1B0GUV7 120 aa13.33□□□□□ -0.28
SMAD3-201ENST00000327367 Q8N8P6 123 aa13.33□□□□□ -0.28
SMAD3-201ENST00000327367 RNASE2P10153 161 aaKnown RBP13.32□□□□□ -0.28
SMAD3-201ENST00000327367 TMEM258P61165 79 aa13.32□□□□□ -0.28
SMAD3-201ENST00000327367 DTX2Q86UW9 622 aa13.32□□□□□ -0.28
SMAD3-201ENST00000327367 DOCK11Q5JSL3 2073 aa13.32□□□□□ -0.28
SMAD3-201ENST00000327367 hADV29S1A0JD25 119 aa13.32□□□□□ -0.28
SMAD3-201ENST00000327367 EPOPA6NHQ4 379 aa13.32□□□□□ -0.28
SMAD3-201ENST00000327367 IGHV1-8P0DP01 117 aa13.32□□□□□ -0.28
SMAD3-201ENST00000327367 SCRT2Q9NQ03 307 aa13.32□□□□□ -0.28
SMAD3-201ENST00000327367 STRCQ7RTU9 1775 aa13.32□□□□□ -0.28
SMAD3-201ENST00000327367 IGKV1-16P04430 117 aa13.32□□□□□ -0.28
SMAD3-201ENST00000327367 SS18Q15532 418 aa13.32□□□□□ -0.28
SMAD3-201ENST00000327367 SVILO95425 2214 aa13.31□□□□□ -0.28
SMAD3-201ENST00000327367 PNRC2Q9NPJ4 139 aaKnown RBP13.31□□□□□ -0.28
SMAD3-201ENST00000327367 PRSS22Q9GZN4 317 aa13.31□□□□□ -0.28
SMAD3-201ENST00000327367 DOCK4Q8N1I0 1966 aa13.31□□□□□ -0.28
SMAD3-201ENST00000327367 PLXNB2O15031 1838 aa13.31□□□□□ -0.28
SMAD3-201ENST00000327367 PCP2Q8IVA1 136 aa13.31□□□□□ -0.28
SMAD3-201ENST00000327367 SMIM27A0A1W2PRY6 76 aa13.3□□□□□ -0.28
SMAD3-201ENST00000327367 HS3ST6Q96QI5 342 aa13.3□□□□□ -0.28
SMAD3-201ENST00000327367 DSCR8Q96T75 97 aa13.3□□□□□ -0.28
SMAD3-201ENST00000327367 NPYP01303 97 aa13.3□□□□□ -0.28
SMAD3-201ENST00000327367 FAM166AQ6J272 317 aa13.3□□□□□ -0.28
SMAD3-201ENST00000327367 PRSS46E5RG02 174 aa13.3□□□□□ -0.28
SMAD3-201ENST00000327367 DEFB130BP0DP73 79 aa13.3□□□□□ -0.28
SMAD3-201ENST00000327367 DEFB130AP0DP74 79 aa13.3□□□□□ -0.28
SMAD3-201ENST00000327367 KIF26BQ2KJY2 2108 aa13.3□□□□□ -0.28
SMAD3-201ENST00000327367 C10orf91Q5T1B1 145 aa13.29□□□□□ -0.28
SMAD3-201ENST00000327367 Q6P435 159 aa13.29□□□□□ -0.28
SMAD3-201ENST00000327367 TRPT1Q86TN4 253 aaKnown RBP13.29□□□□□ -0.28
SMAD3-201ENST00000327367 LGALS9BQ3B8N2 356 aa13.29□□□□□ -0.28
SMAD3-201ENST00000327367 LGALS9CQ6DKI2 356 aa13.29□□□□□ -0.28
SMAD3-201ENST00000327367 BRD3OSQ6XYD6 125 aa13.29□□□□□ -0.28
SMAD3-201ENST00000327367 SEC16AO15027 2179 aa13.29□□□□□ -0.28
SMAD3-201ENST00000327367 SHISA9B4DS77 424 aa13.29□□□□□ -0.28
SMAD3-201ENST00000327367 DIDO1Q9BTC0 2240 aaKnown RBP13.29□□□□□ -0.28
SMAD3-201ENST00000327367 NDUFA12Q9UI09 145 aa13.29□□□□□ -0.28
SMAD3-201ENST00000327367 TMEM75Q8N9X5 138 aa13.28□□□□□ -0.28
SMAD3-201ENST00000327367 PDCD11Q14690 1871 aaKnown RBP13.28□□□□□ -0.28
SMAD3-201ENST00000327367 MMP23AO75900 390 aa13.28□□□□□ -0.28
SMAD3-201ENST00000327367 TDRG1Q3Y452 100 aa13.28□□□□□ -0.28
SMAD3-201ENST00000327367 C9orf139Q6ZV77 190 aa13.28□□□□□ -0.28
SMAD3-201ENST00000327367 IL18BPO95998 194 aa13.28□□□□□ -0.28
SMAD3-201ENST00000327367 THBDP07204 575 aa13.28□□□□□ -0.28
SMAD3-201ENST00000327367 E9PLN8 166 aa13.28□□□□□ -0.28
SMAD3-201ENST00000327367 TMEM243Q9BU79 118 aa13.28□□□□□ -0.28
SMAD3-201ENST00000327367 C1orf53Q5VUE5 145 aa13.27□□□□□ -0.28
SMAD3-201ENST00000327367 TMEM141Q96I45 108 aa13.27□□□□□ -0.28
SMAD3-201ENST00000327367 SLX1AQ9BQ83 275 aa13.27□□□□□ -0.28
SMAD3-201ENST00000327367 LRRK1Q38SD2 2015 aa13.27□□□□□ -0.28
SMAD3-201ENST00000327367 IGKV3D-7A0A0C4DH55 119 aa13.27□□□□□ -0.28
SMAD3-201ENST00000327367 NDUFS7O75251 213 aa13.27□□□□□ -0.28
SMAD3-201ENST00000327367 CFHR1Q03591 330 aa13.27□□□□□ -0.28
SMAD3-201ENST00000327367 UBE2DNLQ8IWF7 75 aa13.27□□□□□ -0.28
SMAD3-201ENST00000327367 SVIPQ8NHG7 77 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms