RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 RABAC1Q9UI14 185 aa14.41□□□□□ -0.1
EXOSC3-201ENST00000327304 PGPA6NDG6 321 aa14.41□□□□□ -0.1
EXOSC3-201ENST00000327304 PEX7O00628 323 aa14.41□□□□□ -0.1
EXOSC3-201ENST00000327304 TGOLN2O43493 480 aa14.41□□□□□ -0.1
EXOSC3-201ENST00000327304 GNG4P50150 75 aa14.41□□□□□ -0.1
EXOSC3-201ENST00000327304 FOXL1Q12952 345 aa14.41□□□□□ -0.1
EXOSC3-201ENST00000327304 ZNF586Q9NXT0 402 aa14.41□□□□□ -0.1
EXOSC3-201ENST00000327304 TENM1Q9UKZ4 2725 aa14.4□□□□□ -0.1
EXOSC3-201ENST00000327304 PGPEP1LA6NFU8 196 aa14.4□□□□□ -0.1
EXOSC3-201ENST00000327304 MRPS12O15235 138 aaKnown RBP14.4□□□□□ -0.1
EXOSC3-201ENST00000327304 LGALS1P09382 135 aaKnown RBP14.4□□□□□ -0.1
EXOSC3-201ENST00000327304 IGLC2P0DOY2 106 aa14.4□□□□□ -0.1
EXOSC3-201ENST00000327304 CNN1P51911 297 aaKnown RBP14.4□□□□□ -0.1
EXOSC3-201ENST00000327304 CENPWQ5EE01 88 aa14.4□□□□□ -0.1
EXOSC3-201ENST00000327304 C5orf17Q8NAS9 161 aa14.4□□□□□ -0.1
EXOSC3-201ENST00000327304 ZNF414Q96IQ9 312 aa14.4□□□□□ -0.1
EXOSC3-201ENST00000327304 CITED2Q99967 270 aaPredicted RBP14.4□□□□□ -0.1
EXOSC3-201ENST00000327304 Q9H3A6 140 aa14.4□□□□□ -0.1
EXOSC3-201ENST00000327304 OTORQ9NRC9 128 aa14.4□□□□□ -0.1
EXOSC3-201ENST00000327304 EPDR1Q9UM22 224 aa14.4□□□□□ -0.1
EXOSC3-201ENST00000327304 IGHV3-35A0A0C4DH35 117 aa14.39□□□□□ -0.11
EXOSC3-201ENST00000327304 ARL3P36405 182 aa14.39□□□□□ -0.11
EXOSC3-201ENST00000327304 CDX1P47902 265 aaPredicted RBP14.39□□□□□ -0.11
EXOSC3-201ENST00000327304 RELQ04864 619 aaPredicted RBP14.39□□□□□ -0.11
EXOSC3-201ENST00000327304 LYPD1Q8N2G4 141 aa14.39□□□□□ -0.11
EXOSC3-201ENST00000327304 WFDC12Q8WWY7 111 aa14.39□□□□□ -0.11
EXOSC3-201ENST00000327304 SFRP2Q96HF1 295 aa14.39□□□□□ -0.11
EXOSC3-201ENST00000327304 ZFAND3Q9H8U3 227 aa14.39□□□□□ -0.11
EXOSC3-201ENST00000327304 MLXQ9UH92 298 aa14.39□□□□□ -0.11
EXOSC3-201ENST00000327304 URGCP-MRPS24S4R325 110 aa14.39□□□□□ -0.11
EXOSC3-201ENST00000327304 FBN1P35555 2871 aaKnown RBP14.39□□□□□ -0.11
EXOSC3-201ENST00000327304 TRBV19A0A075B6N1 114 aa14.38□□□□□ -0.11
EXOSC3-201ENST00000327304 SLC25A5P05141 298 aaKnown RBP14.38□□□□□ -0.11
EXOSC3-201ENST00000327304 TOMM20LQ6UXN7 152 aa14.38□□□□□ -0.11
EXOSC3-201ENST00000327304 IGF2BP2-AS1Q96M15 143 aa14.38□□□□□ -0.11
EXOSC3-201ENST00000327304 PEF1Q9UBV8 284 aaKnown RBP14.38□□□□□ -0.11
EXOSC3-201ENST00000327304 TRBV24-1A0A075B6N3 115 aa14.38□□□□□ -0.11
EXOSC3-201ENST00000327304 LOC105371267A0A1B0GV96 52 aa14.38□□□□□ -0.11
EXOSC3-201ENST00000327304 PFN1P07737 140 aaKnown RBP14.38□□□□□ -0.11
EXOSC3-201ENST00000327304 SNRPCP09234 159 aaKnown RBP14.38□□□□□ -0.11
EXOSC3-201ENST00000327304 S100PP25815 95 aa14.38□□□□□ -0.11
EXOSC3-201ENST00000327304 AURKAIP1Q9NWT8 199 aaPredicted RBP14.38□□□□□ -0.11
EXOSC3-201ENST00000327304 A0A1W2PRX2 142 aa14.37□□□□□ -0.11
EXOSC3-201ENST00000327304 K7EN84 100 aa14.37□□□□□ -0.11
EXOSC3-201ENST00000327304 S100A9P06702 114 aaKnown RBP14.37□□□□□ -0.11
EXOSC3-201ENST00000327304 CXCL1P09341 107 aa14.37□□□□□ -0.11
EXOSC3-201ENST00000327304 RPL7P18124 248 aaKnown RBP14.37□□□□□ -0.11
EXOSC3-201ENST00000327304 GALR1P47211 349 aa14.37□□□□□ -0.11
EXOSC3-201ENST00000327304 FLI1Q01543 452 aaPredicted RBP14.37□□□□□ -0.11
EXOSC3-201ENST00000327304 PDE6HQ13956 83 aa14.37□□□□□ -0.11
EXOSC3-201ENST00000327304 KLHL30-AS1Q8NEE0 82 aa14.37□□□□□ -0.11
EXOSC3-201ENST00000327304 C4orf3Q8WVX3 66 aa14.37□□□□□ -0.11
EXOSC3-201ENST00000327304 IMMP2LQ96T52 175 aa14.37□□□□□ -0.11
EXOSC3-201ENST00000327304 ATG101Q9BSB4 218 aa14.37□□□□□ -0.11
EXOSC3-201ENST00000327304 KLF12Q9Y4X4 402 aa14.37□□□□□ -0.11
EXOSC3-201ENST00000327304 TMEM183BQ1AE95 376 aa14.36□□□□□ -0.11
EXOSC3-201ENST00000327304 DEFB136Q30KP8 78 aa14.36□□□□□ -0.11
EXOSC3-201ENST00000327304 C1QL4Q86Z23 238 aa14.36□□□□□ -0.11
EXOSC3-201ENST00000327304 TSSC4Q9Y5U2 329 aaPredicted RBP14.36□□□□□ -0.11
EXOSC3-201ENST00000327304 TGIF2-C20orf24A0A0A6YYL0 155 aa14.36□□□□□ -0.11
EXOSC3-201ENST00000327304 C1orf196B1AJZ1 125 aa14.36□□□□□ -0.11
EXOSC3-201ENST00000327304 OR10G8Q8NGN5 311 aa14.36□□□□□ -0.11
EXOSC3-201ENST00000327304 SMIM12Q96EX1 92 aa14.36□□□□□ -0.11
EXOSC3-201ENST00000327304 PYGO2Q9BRQ0 406 aa14.36□□□□□ -0.11
EXOSC3-201ENST00000327304 IGHV4OR15-8A0A075B7B6 117 aa14.35□□□□□ -0.11
EXOSC3-201ENST00000327304 A0A087WW49 117 aa14.35□□□□□ -0.11
EXOSC3-201ENST00000327304 GCGP01275 180 aa14.35□□□□□ -0.11
EXOSC3-201ENST00000327304 IGLV2-8P01709 118 aa14.35□□□□□ -0.11
EXOSC3-201ENST00000327304 RAB5BP61020 215 aa14.35□□□□□ -0.11
EXOSC3-201ENST00000327304 FAM209BQ5JX69 171 aa14.35□□□□□ -0.11
EXOSC3-201ENST00000327304 C8orf86Q6ZUL3 223 aa14.35□□□□□ -0.11
EXOSC3-201ENST00000327304 LURAP1LQ8IV03 231 aa14.35□□□□□ -0.11
EXOSC3-201ENST00000327304 ADARB2-AS1A8MUL3 147 aa14.34□□□□□ -0.11
EXOSC3-201ENST00000327304 H3BTX0 84 aa14.34□□□□□ -0.11
EXOSC3-201ENST00000327304 GGCTO75223 188 aaKnown RBP14.34□□□□□ -0.11
EXOSC3-201ENST00000327304 TCRAP04437 139 aa14.34□□□□□ -0.11
EXOSC3-201ENST00000327304 GNG5P63218 68 aa14.34□□□□□ -0.11
EXOSC3-201ENST00000327304 KCNIP4Q6PIL6 250 aa14.34□□□□□ -0.11
EXOSC3-201ENST00000327304 SIGLEC15Q6ZMC9 328 aa14.34□□□□□ -0.11
EXOSC3-201ENST00000327304 FAM210BQ96KR6 192 aa14.34□□□□□ -0.11
EXOSC3-201ENST00000327304 LINC00479Q96M42 142 aa14.34□□□□□ -0.11
EXOSC3-201ENST00000327304 IGHV3OR16-8A0A075B7F1 116 aa14.34□□□□□ -0.11
EXOSC3-201ENST00000327304 UBE2G1P62253 170 aa14.34□□□□□ -0.11
EXOSC3-201ENST00000327304 CMTM2Q8TAZ6 248 aa14.34□□□□□ -0.11
EXOSC3-201ENST00000327304 FMC1Q96HJ9 113 aa14.34□□□□□ -0.11
EXOSC3-201ENST00000327304 DUX3Q96PT4 197 aa14.34□□□□□ -0.11
EXOSC3-201ENST00000327304 RPS10P46783 165 aaKnown RBP14.33□□□□□ -0.12
EXOSC3-201ENST00000327304 OR8I2Q8N0Y5 310 aa14.33□□□□□ -0.12
EXOSC3-201ENST00000327304 BTF3L4Q96K17 158 aa14.33□□□□□ -0.12
EXOSC3-201ENST00000327304 GPR82Q96P67 336 aa14.33□□□□□ -0.12
EXOSC3-201ENST00000327304 OSTCQ9NRP0 149 aa14.33□□□□□ -0.12
EXOSC3-201ENST00000327304 ISLRO14498 428 aa14.32□□□□□ -0.12
EXOSC3-201ENST00000327304 BUB3O43684 328 aa14.32□□□□□ -0.12
EXOSC3-201ENST00000327304 PSG9Q00887 426 aa14.32□□□□□ -0.12
EXOSC3-201ENST00000327304 C1orf194Q5T5A4 169 aa14.32□□□□□ -0.12
EXOSC3-201ENST00000327304 BAGE2Q86Y30 109 aa14.32□□□□□ -0.12
EXOSC3-201ENST00000327304 C17orf77Q96MU5 243 aa14.32□□□□□ -0.12
EXOSC3-201ENST00000327304 ZNF253O75346 499 aa14.31□□□□□ -0.12
EXOSC3-201ENST00000327304 ERVFC1-1P60608 527 aa14.31□□□□□ -0.12
EXOSC3-201ENST00000327304 NSUN5P1Q3KNT7 163 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms