RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 C9orf118A6NHY6 69 aa11.35□□□□□ -0.59
CHRNA3-201ENST00000326828 IGHG3P01860 377 aa11.35□□□□□ -0.59
CHRNA3-201ENST00000326828 COX7A1P24310 79 aa11.35□□□□□ -0.59
CHRNA3-201ENST00000326828 BCL6BQ8N143 479 aaPredicted RBP11.35□□□□□ -0.59
CHRNA3-201ENST00000326828 ZNF492Q9P255 531 aa11.35□□□□□ -0.59
CHRNA3-201ENST00000326828 ZNF785A8K8V0 405 aa11.35□□□□□ -0.59
CHRNA3-201ENST00000326828 IGLV2-11P01706 119 aa11.35□□□□□ -0.59
CHRNA3-201ENST00000326828 SEC11AP67812 179 aa11.35□□□□□ -0.59
CHRNA3-201ENST00000326828 PIP4P2Q8N4L2 257 aa11.35□□□□□ -0.59
CHRNA3-201ENST00000326828 ZNF414Q96IQ9 312 aa11.35□□□□□ -0.59
CHRNA3-201ENST00000326828 PSG8Q9UQ74 426 aa11.35□□□□□ -0.59
CHRNA3-201ENST00000326828 ARHGAP32A7KAX9 2087 aa11.35□□□□□ -0.59
CHRNA3-201ENST00000326828 IGHV3-35A0A0C4DH35 117 aa11.35□□□□□ -0.59
CHRNA3-201ENST00000326828 TM4SF5O14894 197 aa11.35□□□□□ -0.59
CHRNA3-201ENST00000326828 CNIH1O95406 144 aa11.35□□□□□ -0.59
CHRNA3-201ENST00000326828 CD59P13987 128 aa11.35□□□□□ -0.59
CHRNA3-201ENST00000326828 FCGR2BP31994 310 aaPredicted RBP11.35□□□□□ -0.59
CHRNA3-201ENST00000326828 CT83Q5H943 113 aa11.35□□□□□ -0.59
CHRNA3-201ENST00000326828 A0A096LNJ9 63 aa11.34□□□□□ -0.59
CHRNA3-201ENST00000326828 CT45A10P0DMU9 189 aa11.34□□□□□ -0.59
CHRNA3-201ENST00000326828 CRIP1P50238 77 aa11.34□□□□□ -0.59
CHRNA3-201ENST00000326828 ANKRD11Q6UB99 2663 aaPredicted RBP11.34□□□□□ -0.59
CHRNA3-201ENST00000326828 PAX2Q02962 417 aa11.34□□□□□ -0.59
CHRNA3-201ENST00000326828 Q8TAT8 98 aa11.34□□□□□ -0.59
CHRNA3-201ENST00000326828 GFRA4Q9GZZ7 299 aa11.34□□□□□ -0.59
CHRNA3-201ENST00000326828 GTSF1LQ9H1H1 148 aa11.34□□□□□ -0.59
CHRNA3-201ENST00000326828 OTORQ9NRC9 128 aa11.34□□□□□ -0.59
CHRNA3-201ENST00000326828 FGF6P10767 208 aa11.33□□□□□ -0.59
CHRNA3-201ENST00000326828 PPIFP30405 207 aaKnown RBP11.33□□□□□ -0.59
CHRNA3-201ENST00000326828 NDUFB3O43676 98 aa11.33□□□□□ -0.6
CHRNA3-201ENST00000326828 IL4P05112 153 aa11.33□□□□□ -0.6
CHRNA3-201ENST00000326828 CKS2P33552 79 aa11.33□□□□□ -0.6
CHRNA3-201ENST00000326828 TWIST1Q15672 202 aa11.33□□□□□ -0.6
CHRNA3-201ENST00000326828 TRGV9Q99603 122 aa11.33□□□□□ -0.6
CHRNA3-201ENST00000326828 TRAV17A0A0B4J275 112 aa11.33□□□□□ -0.6
CHRNA3-201ENST00000326828 SMAD7O15105 426 aaKnown RBP11.33□□□□□ -0.6
CHRNA3-201ENST00000326828 IGHV3-23P01764 117 aa11.33□□□□□ -0.6
CHRNA3-201ENST00000326828 EVI2AP22794 236 aa11.33□□□□□ -0.6
CHRNA3-201ENST00000326828 TMEM75Q8N9X5 138 aa11.33□□□□□ -0.6
CHRNA3-201ENST00000326828 JKAMPQ9P055 326 aa11.33□□□□□ -0.6
CHRNA3-201ENST00000326828 AKAP6Q13023 2319 aa11.33□□□□□ -0.6
CHRNA3-201ENST00000326828 DCHS2Q6V1P9 2916 aa11.32□□□□□ -0.6
CHRNA3-201ENST00000326828 K7EP34 96 aa11.32□□□□□ -0.6
CHRNA3-201ENST00000326828 IGLV3-9A0A075B6K5 115 aa11.32□□□□□ -0.6
CHRNA3-201ENST00000326828 IGKV2-40A0A087WW87 121 aaPredicted RBP11.32□□□□□ -0.6
CHRNA3-201ENST00000326828 IGKV2D-40P01614 121 aaPredicted RBP11.32□□□□□ -0.6
CHRNA3-201ENST00000326828 IFI27L1Q96BM0 104 aa11.32□□□□□ -0.6
CHRNA3-201ENST00000326828 INSIG2Q9Y5U4 225 aa11.32□□□□□ -0.6
CHRNA3-201ENST00000326828 H3BRM9 83 aa11.31□□□□□ -0.6
CHRNA3-201ENST00000326828 GAS8-AS1O95177 125 aa11.31□□□□□ -0.6
CHRNA3-201ENST00000326828 PRSS1P07477 247 aa11.31□□□□□ -0.6
CHRNA3-201ENST00000326828 CD40P25942 277 aa11.31□□□□□ -0.6
CHRNA3-201ENST00000326828 SMAGPQ0VAQ4 97 aa11.31□□□□□ -0.6
CHRNA3-201ENST00000326828 PPIAL4EA0A075B759 164 aa11.31□□□□□ -0.6
CHRNA3-201ENST00000326828 CDX4O14627 284 aaPredicted RBP11.31□□□□□ -0.6
CHRNA3-201ENST00000326828 NPYP01303 97 aa11.31□□□□□ -0.6
CHRNA3-201ENST00000326828 PPIAL4FP0DN26 164 aa11.31□□□□□ -0.6
CHRNA3-201ENST00000326828 FCER1GP30273 86 aa11.31□□□□□ -0.6
CHRNA3-201ENST00000326828 UFSP1Q6NVU6 142 aa11.31□□□□□ -0.6
CHRNA3-201ENST00000326828 TMEM186Q96B77 213 aa11.31□□□□□ -0.6
CHRNA3-201ENST00000326828 NGBQ9NPG2 151 aa11.31□□□□□ -0.6
CHRNA3-201ENST00000326828 MSRB1Q9NZV6 116 aa11.31□□□□□ -0.6
CHRNA3-201ENST00000326828 TMEM189A5PLL7 270 aa11.31□□□□□ -0.6
CHRNA3-201ENST00000326828 NPIPB5A8MRT5 1133 aa11.31□□□□□ -0.6
CHRNA3-201ENST00000326828 NPIPB6E9PJ23 425 aa11.31□□□□□ -0.6
CHRNA3-201ENST00000326828 LYNX1G3V0Z9 82 aa11.31□□□□□ -0.6
CHRNA3-201ENST00000326828 G3V4G9 280 aa11.31□□□□□ -0.6
CHRNA3-201ENST00000326828 K7EQM0 130 aa11.31□□□□□ -0.6
CHRNA3-201ENST00000326828 LYNX1P0DP58 116 aa11.31□□□□□ -0.6
CHRNA3-201ENST00000326828 FABP2P12104 132 aa11.31□□□□□ -0.6
CHRNA3-201ENST00000326828 TMEM11P17152 192 aa11.31□□□□□ -0.6
CHRNA3-201ENST00000326828 GATA4P43694 442 aa11.31□□□□□ -0.6
CHRNA3-201ENST00000326828 C1orf185Q5T7R7 199 aa11.31□□□□□ -0.6
CHRNA3-201ENST00000326828 CLEC2AQ6UVW9 174 aa11.31□□□□□ -0.6
CHRNA3-201ENST00000326828 RPS20P60866 119 aaKnown RBP11.3□□□□□ -0.6
CHRNA3-201ENST00000326828 ORMDL3Q8N138 153 aa11.3□□□□□ -0.6
CHRNA3-201ENST00000326828 PRSS33Q8NF86 280 aa11.3□□□□□ -0.6
CHRNA3-201ENST00000326828 CTSZQ9UBR2 303 aa11.3□□□□□ -0.6
CHRNA3-201ENST00000326828 TEX48A0A1B0GUV7 120 aa11.3□□□□□ -0.6
CHRNA3-201ENST00000326828 A0A1W2PPM0 123 aa11.3□□□□□ -0.6
CHRNA3-201ENST00000326828 FXYD2P54710 66 aa11.3□□□□□ -0.6
CHRNA3-201ENST00000326828 SAMD5Q5TGI4 173 aa11.3□□□□□ -0.6
CHRNA3-201ENST00000326828 LCNL1Q6ZST4 164 aa11.3□□□□□ -0.6
CHRNA3-201ENST00000326828 NHP2Q9NX24 153 aaKnown RBP11.3□□□□□ -0.6
CHRNA3-201ENST00000326828 IGKV2D-26A0A0A0MRZ7 120 aa11.3□□□□□ -0.6
CHRNA3-201ENST00000326828 HSD52Q0P140 79 aa11.3□□□□□ -0.6
CHRNA3-201ENST00000326828 MRGPRG-AS1Q2M3A8 158 aa11.3□□□□□ -0.6
CHRNA3-201ENST00000326828 MRPL51Q4U2R6 128 aaKnown RBP11.3□□□□□ -0.6
CHRNA3-201ENST00000326828 GTSCR1Q86UQ5 136 aa11.3□□□□□ -0.6
CHRNA3-201ENST00000326828 HBDP02042 147 aa11.29□□□□□ -0.6
CHRNA3-201ENST00000326828 BOD1L2Q8IYS8 172 aa11.29□□□□□ -0.6
CHRNA3-201ENST00000326828 TRBV19A0A075B6N1 114 aa11.29□□□□□ -0.6
CHRNA3-201ENST00000326828 PPIAL4CA0A0B4J2A2 164 aa11.29□□□□□ -0.6
CHRNA3-201ENST00000326828 PPIAL4GP0DN37 164 aa11.29□□□□□ -0.6
CHRNA3-201ENST00000326828 GATA1P15976 413 aaPredicted RBP11.29□□□□□ -0.6
CHRNA3-201ENST00000326828 PPP1R27Q86WC6 154 aa11.29□□□□□ -0.6
CHRNA3-201ENST00000326828 SIGLEC9Q9Y336 463 aa11.29□□□□□ -0.6
CHRNA3-201ENST00000326828 M0R296 226 aa11.28□□□□□ -0.6
CHRNA3-201ENST00000326828 IGKV1-17P01599 117 aa11.28□□□□□ -0.6
CHRNA3-201ENST00000326828 PSG3Q16557 428 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms