RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 NRN1Q9NPD7 142 aa16.73■□□□□ 0.27
LIMS2-201ENST00000324938 ZNF785A8K8V0 405 aa16.72■□□□□ 0.27
LIMS2-201ENST00000324938 NPFFO15130 113 aa16.72■□□□□ 0.27
LIMS2-201ENST00000324938 PMCHP20382 165 aa16.72■□□□□ 0.27
LIMS2-201ENST00000324938 AAMDCQ9H7C9 122 aa16.72■□□□□ 0.27
LIMS2-201ENST00000324938 RNF114Q9Y508 228 aa16.72■□□□□ 0.27
LIMS2-201ENST00000324938 OR2D3Q8NGH3 330 aa16.72■□□□□ 0.27
LIMS2-201ENST00000324938 M0R3E3 92 aa16.71■□□□□ 0.27
LIMS2-201ENST00000324938 RPL7P18124 248 aaKnown RBP16.71■□□□□ 0.27
LIMS2-201ENST00000324938 UNQ5815/PRO19632Q6UWF5 114 aa16.71■□□□□ 0.27
LIMS2-201ENST00000324938 PIP4P2Q8N4L2 257 aa16.71■□□□□ 0.27
LIMS2-201ENST00000324938 TMUB1Q9BVT8 246 aa16.71■□□□□ 0.27
LIMS2-201ENST00000324938 AKAP6Q13023 2319 aa16.71■□□□□ 0.27
LIMS2-201ENST00000324938 ATP6V0E1O15342 81 aa16.7■□□□□ 0.26
LIMS2-201ENST00000324938 RABAC1Q9UI14 185 aa16.7■□□□□ 0.26
LIMS2-201ENST00000324938 ABCA2Q9BZC7 2435 aa16.7■□□□□ 0.26
LIMS2-201ENST00000324938 PKD1L2Q7Z442 2459 aa16.7■□□□□ 0.26
LIMS2-201ENST00000324938 ASH1LQ9NR48 2969 aaKnown RBP16.7■□□□□ 0.26
LIMS2-201ENST00000324938 CENPVL3A0A0U1RRI6 287 aa16.7■□□□□ 0.26
LIMS2-201ENST00000324938 PSG9Q00887 426 aa16.7■□□□□ 0.26
LIMS2-201ENST00000324938 ECSCRQ19T08 205 aa16.7■□□□□ 0.26
LIMS2-201ENST00000324938 SERTM2A0A1B0GWG4 89 aa16.69■□□□□ 0.26
LIMS2-201ENST00000324938 FOXA3P55318 350 aaPredicted RBP16.69■□□□□ 0.26
LIMS2-201ENST00000324938 NIT1Q86X76 327 aa16.69■□□□□ 0.26
LIMS2-201ENST00000324938 ZNF502Q8TBZ5 544 aa16.69■□□□□ 0.26
LIMS2-201ENST00000324938 KRTDAPP60985 99 aa16.68■□□□□ 0.26
LIMS2-201ENST00000324938 C15orf32Q32M92 178 aa16.68■□□□□ 0.26
LIMS2-201ENST00000324938 ARL6IP6Q8N6S5 226 aa16.68■□□□□ 0.26
LIMS2-201ENST00000324938 Q8N976 141 aa16.68■□□□□ 0.26
LIMS2-201ENST00000324938 APOHP02749 345 aaPredicted RBP16.67■□□□□ 0.26
LIMS2-201ENST00000324938 CSN1S1P47710 185 aa16.67■□□□□ 0.26
LIMS2-201ENST00000324938 HAX1O00165 279 aa16.67■□□□□ 0.26
LIMS2-201ENST00000324938 S100A7P31151 101 aa16.67■□□□□ 0.26
LIMS2-201ENST00000324938 RHOGP84095 191 aa16.67■□□□□ 0.26
LIMS2-201ENST00000324938 PAX8Q06710 450 aa16.67■□□□□ 0.26
LIMS2-201ENST00000324938 FAM19A2Q8N3H0 131 aa16.67■□□□□ 0.26
LIMS2-201ENST00000324938 GPR183P32249 361 aa16.66■□□□□ 0.26
LIMS2-201ENST00000324938 ASCL2Q99929 193 aa16.66■□□□□ 0.26
LIMS2-201ENST00000324938 CSMD1Q96PZ7 3565 aa16.66■□□□□ 0.26
LIMS2-201ENST00000324938 SH2D7A6NKC9 451 aaPredicted RBP16.66■□□□□ 0.26
LIMS2-201ENST00000324938 C5orf56Q8N8D9 126 aa16.66■□□□□ 0.26
LIMS2-201ENST00000324938 C20orf144Q9BQM9 153 aa16.66■□□□□ 0.26
LIMS2-201ENST00000324938 CACNA1AO00555 2505 aa16.65■□□□□ 0.26
LIMS2-201ENST00000324938 GOSR1O95249 250 aa16.65■□□□□ 0.26
LIMS2-201ENST00000324938 PRB4P10163 310 aaPredicted RBP16.65■□□□□ 0.26
LIMS2-201ENST00000324938 CRIP1P50238 77 aa16.65■□□□□ 0.26
LIMS2-201ENST00000324938 TDRG1Q3Y452 100 aa16.65■□□□□ 0.26
LIMS2-201ENST00000324938 HSBP1O75506 76 aa16.64■□□□□ 0.25
LIMS2-201ENST00000324938 NTF3P20783 257 aa16.64■□□□□ 0.25
LIMS2-201ENST00000324938 LBHQ53QV2 105 aaPredicted RBP16.64■□□□□ 0.25
LIMS2-201ENST00000324938 PIMREGQ9BSJ6 248 aa16.64■□□□□ 0.25
LIMS2-201ENST00000324938 VAMP8Q9BV40 100 aa16.64■□□□□ 0.25
LIMS2-201ENST00000324938 ZFAND3Q9H8U3 227 aa16.64■□□□□ 0.25
LIMS2-201ENST00000324938 SMAD5-AS1Q9Y6J3 95 aa16.64■□□□□ 0.25
LIMS2-201ENST00000324938 C8orf49Q96NF6 230 aa16.64■□□□□ 0.25
LIMS2-201ENST00000324938 CHEK1O14757 476 aa16.63■□□□□ 0.25
LIMS2-201ENST00000324938 C3orf79P0CE67 100 aa16.63■□□□□ 0.25
LIMS2-201ENST00000324938 CT45A10P0DMU9 189 aa16.63■□□□□ 0.25
LIMS2-201ENST00000324938 PRR31Q5SQ13 230 aa16.63■□□□□ 0.25
LIMS2-201ENST00000324938 A0A1B0GUT8 65 aa16.63■□□□□ 0.25
LIMS2-201ENST00000324938 FBLL1A6NHQ2 334 aaKnown RBP16.63■□□□□ 0.25
LIMS2-201ENST00000324938 LINC01548A6NM66 108 aa16.63■□□□□ 0.25
LIMS2-201ENST00000324938 G3V318 75 aa16.63■□□□□ 0.25
LIMS2-201ENST00000324938 FAM162BQ5T6X4 162 aa16.63■□□□□ 0.25
LIMS2-201ENST00000324938 RNASEKQ6P5S7 137 aaKnown RBP16.63■□□□□ 0.25
LIMS2-201ENST00000324938 COX8CQ7Z4L0 72 aa16.63■□□□□ 0.25
LIMS2-201ENST00000324938 BORCS7Q96B45 105 aa16.63■□□□□ 0.25
LIMS2-201ENST00000324938 CCDC140Q96MF4 163 aa16.63■□□□□ 0.25
LIMS2-201ENST00000324938 CCL19Q99731 98 aa16.63■□□□□ 0.25
LIMS2-201ENST00000324938 LOC102724200A0A096LPH7 203 aaPredicted RBP16.62■□□□□ 0.25
LIMS2-201ENST00000324938 Q6AWC8 147 aa16.62■□□□□ 0.25
LIMS2-201ENST00000324938 IGHV1-69DA0A0B4J2H0 117 aa16.61■□□□□ 0.25
LIMS2-201ENST00000324938 IGHV3-35A0A0C4DH35 117 aa16.61■□□□□ 0.25
LIMS2-201ENST00000324938 IGHV1-69P01742 117 aa16.61■□□□□ 0.25
LIMS2-201ENST00000324938 CLEC3BP05452 202 aa16.61■□□□□ 0.25
LIMS2-201ENST00000324938 GATD1Q8NB37 220 aa16.61■□□□□ 0.25
LIMS2-201ENST00000324938 URB1-AS1Q96HZ7 61 aa16.61■□□□□ 0.25
LIMS2-201ENST00000324938 C2orf88Q9BSF0 95 aa16.61■□□□□ 0.25
LIMS2-201ENST00000324938 MOB4Q9Y3A3 225 aa16.61■□□□□ 0.25
LIMS2-201ENST00000324938 PAM16Q9Y3D7 125 aa16.61■□□□□ 0.25
LIMS2-201ENST00000324938 IGKV2-40A0A087WW87 121 aaPredicted RBP16.61■□□□□ 0.25
LIMS2-201ENST00000324938 IGHV4-61A0A0C4DH41 118 aa16.61■□□□□ 0.25
LIMS2-201ENST00000324938 IGKV2D-40P01614 121 aaPredicted RBP16.61■□□□□ 0.25
LIMS2-201ENST00000324938 RAB9AP51151 201 aa16.61■□□□□ 0.25
LIMS2-201ENST00000324938 C10orf105Q8TEF2 133 aa16.61■□□□□ 0.25
LIMS2-201ENST00000324938 NDFIP1Q9BT67 221 aa16.61■□□□□ 0.25
LIMS2-201ENST00000324938 PIEZO1Q92508 2521 aa16.61■□□□□ 0.25
LIMS2-201ENST00000324938 IGHV3OR16-8A0A075B7F1 116 aa16.6■□□□□ 0.25
LIMS2-201ENST00000324938 TMEM8BA6NDV4 472 aa16.6■□□□□ 0.25
LIMS2-201ENST00000324938 M0R2Z0 102 aa16.6■□□□□ 0.25
LIMS2-201ENST00000324938 ARMS2P0C7Q2 107 aa16.6■□□□□ 0.25
LIMS2-201ENST00000324938 RIGQ13278 110 aa16.6■□□□□ 0.25
LIMS2-201ENST00000324938 EEF1AKMT3Q96AZ1 226 aa16.6■□□□□ 0.25
LIMS2-201ENST00000324938 A0A087X0K7 114 aa16.6■□□□□ 0.25
LIMS2-201ENST00000324938 A0A1B0GW15 77 aa16.6■□□□□ 0.25
LIMS2-201ENST00000324938 IGHG4P01861 327 aa16.6■□□□□ 0.25
LIMS2-201ENST00000324938 SAPCD1Q5SSQ6 148 aa16.6■□□□□ 0.25
LIMS2-201ENST00000324938 NDUFS8O00217 210 aa16.59■□□□□ 0.25
LIMS2-201ENST00000324938 CLEC19AQ6UXS0 136 aa16.59■□□□□ 0.25
LIMS2-201ENST00000324938 TMEM219Q86XT9 240 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms