RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 GAGE12JA6NER3 117 aa13.45□□□□□ -0.26
PACS1-201ENST00000320580 GAGE7O76087 117 aa13.45□□□□□ -0.26
PACS1-201ENST00000320580 GAGE12FP0CL80 117 aa13.45□□□□□ -0.26
PACS1-201ENST00000320580 GAGE12GP0CL81 117 aa13.45□□□□□ -0.26
PACS1-201ENST00000320580 GAGE12IP0CL82 117 aa13.45□□□□□ -0.26
PACS1-201ENST00000320580 GAGE4Q13068 117 aa13.45□□□□□ -0.26
PACS1-201ENST00000320580 FAM214BQ7L5A3 538 aa13.45□□□□□ -0.26
PACS1-201ENST00000320580 C20orf78Q9BR46 151 aa13.45□□□□□ -0.26
PACS1-201ENST00000320580 FNDC10F2Z333 226 aa13.45□□□□□ -0.26
PACS1-201ENST00000320580 RNF183Q96D59 192 aa13.45□□□□□ -0.26
PACS1-201ENST00000320580 LINC01549A6NIU2 74 aa13.45□□□□□ -0.26
PACS1-201ENST00000320580 HAX1O00165 279 aa13.45□□□□□ -0.26
PACS1-201ENST00000320580 IGHV4-39P01824 125 aa13.45□□□□□ -0.26
PACS1-201ENST00000320580 LGALS3P17931 250 aaKnown RBP13.45□□□□□ -0.26
PACS1-201ENST00000320580 TMPRSS3P57727 454 aa13.45□□□□□ -0.26
PACS1-201ENST00000320580 TRAV8-4A0A0B4J246 113 aa13.44□□□□□ -0.26
PACS1-201ENST00000320580 TMEM155Q4W5P6 130 aa13.44□□□□□ -0.26
PACS1-201ENST00000320580 ZGRF1Q86YA3 2104 aa13.44□□□□□ -0.26
PACS1-201ENST00000320580 NUP210LQ5VU65 1888 aa13.44□□□□□ -0.26
PACS1-201ENST00000320580 PKDREJQ9NTG1 2253 aa13.44□□□□□ -0.26
PACS1-201ENST00000320580 FREM1Q5H8C1 2179 aa13.44□□□□□ -0.26
PACS1-201ENST00000320580 PRR33A8MZF0 331 aa13.44□□□□□ -0.26
PACS1-201ENST00000320580 ZNF562Q6V9R5 426 aa13.44□□□□□ -0.26
PACS1-201ENST00000320580 PRSS29PA6NIE9 313 aa13.43□□□□□ -0.26
PACS1-201ENST00000320580 NPIPB5A8MRT5 1133 aa13.43□□□□□ -0.26
PACS1-201ENST00000320580 ADAMTS9Q9P2N4 1935 aa13.43□□□□□ -0.26
PACS1-201ENST00000320580 CCL8P80075 99 aa13.43□□□□□ -0.26
PACS1-201ENST00000320580 TMEM105Q8N8V8 129 aa13.43□□□□□ -0.26
PACS1-201ENST00000320580 NEU4Q8WWR8 484 aaPredicted RBP13.43□□□□□ -0.26
PACS1-201ENST00000320580 TMEM14BQ9NUH8 114 aa13.43□□□□□ -0.26
PACS1-201ENST00000320580 CD177Q8N6Q3 437 aa13.43□□□□□ -0.26
PACS1-201ENST00000320580 C1QTNF4Q9BXJ3 329 aa13.43□□□□□ -0.26
PACS1-201ENST00000320580 TRBV25-1A0A075B6N4 114 aa13.43□□□□□ -0.26
PACS1-201ENST00000320580 NDUFS7O75251 213 aa13.43□□□□□ -0.26
PACS1-201ENST00000320580 IGKV1-16P04430 117 aa13.43□□□□□ -0.26
PACS1-201ENST00000320580 MORN5Q5VZ52 161 aa13.43□□□□□ -0.26
PACS1-201ENST00000320580 MRPL14Q6P1L8 145 aaKnown RBP13.43□□□□□ -0.26
PACS1-201ENST00000320580 FAM216BQ8N7L0 139 aa13.43□□□□□ -0.26
PACS1-201ENST00000320580 PCDH15Q96QU1 1955 aa13.42□□□□□ -0.26
PACS1-201ENST00000320580 IGHV3-35A0A0C4DH35 117 aa13.42□□□□□ -0.26
PACS1-201ENST00000320580 HERV-K104P63124 156 aa13.42□□□□□ -0.26
PACS1-201ENST00000320580 WDR86Q86TI4 376 aa13.42□□□□□ -0.26
PACS1-201ENST00000320580 NGBQ9NPG2 151 aa13.42□□□□□ -0.26
PACS1-201ENST00000320580 KLF12Q9Y4X4 402 aa13.42□□□□□ -0.26
PACS1-201ENST00000320580 FAM104BQ5XKR9 115 aa13.42□□□□□ -0.26
PACS1-201ENST00000320580 NEGR1Q7Z3B1 354 aa13.42□□□□□ -0.26
PACS1-201ENST00000320580 TCTEX1D4Q5JR98 221 aa13.42□□□□□ -0.26
PACS1-201ENST00000320580 KIAA1549LQ6ZVL6 1849 aa13.42□□□□□ -0.26
PACS1-201ENST00000320580 NBASA2RRP1 2371 aa13.42□□□□□ -0.26
PACS1-201ENST00000320580 C8orf46Q8TAG6 207 aa13.41□□□□□ -0.26
PACS1-201ENST00000320580 C9JAW5 83 aa13.41□□□□□ -0.26
PACS1-201ENST00000320580 IGLV2-8P01709 118 aa13.41□□□□□ -0.26
PACS1-201ENST00000320580 COL8A2P25067 703 aa13.41□□□□□ -0.26
PACS1-201ENST00000320580 KMT2EQ8IZD2 1858 aa13.41□□□□□ -0.26
PACS1-201ENST00000320580 RRN3P1Q2M238 152 aa13.41□□□□□ -0.26
PACS1-201ENST00000320580 GTSF1Q8WW33 167 aa13.41□□□□□ -0.26
PACS1-201ENST00000320580 DLX6P56179 175 aa13.41□□□□□ -0.26
PACS1-201ENST00000320580 SAP25Q8TEE9 199 aa13.41□□□□□ -0.26
PACS1-201ENST00000320580 LTAP01374 205 aa13.4□□□□□ -0.26
PACS1-201ENST00000320580 SSBP2P81877 361 aaPredicted RBP13.4□□□□□ -0.26
PACS1-201ENST00000320580 TECTAO75443 2155 aa13.4□□□□□ -0.26
PACS1-201ENST00000320580 PINLYPA6NC86 204 aa13.4□□□□□ -0.26
PACS1-201ENST00000320580 FXYD5Q96DB9 178 aa13.4□□□□□ -0.26
PACS1-201ENST00000320580 ZNF503-AS2A6NEH8 195 aa13.4□□□□□ -0.26
PACS1-201ENST00000320580 MRPL51Q4U2R6 128 aaKnown RBP13.4□□□□□ -0.26
PACS1-201ENST00000320580 GLMPQ8WWB7 406 aa13.39□□□□□ -0.27
PACS1-201ENST00000320580 B3GALT5-AS1P59052 145 aa13.39□□□□□ -0.27
PACS1-201ENST00000320580 TMEM78Q5T7P6 136 aa13.39□□□□□ -0.27
PACS1-201ENST00000320580 C2orf91Q6ZV80 131 aa13.39□□□□□ -0.27
PACS1-201ENST00000320580 NPYP01303 97 aa13.39□□□□□ -0.27
PACS1-201ENST00000320580 TMEM95Q3KNT9 176 aa13.39□□□□□ -0.27
PACS1-201ENST00000320580 FAM120AOSQ5T036 256 aa13.39□□□□□ -0.27
PACS1-201ENST00000320580 PRR7Q8TB68 274 aa13.39□□□□□ -0.27
PACS1-201ENST00000320580 DEFB124Q8NES8 71 aa13.39□□□□□ -0.27
PACS1-201ENST00000320580 SPANXB1Q9NS25 103 aaPredicted RBP13.39□□□□□ -0.27
PACS1-201ENST00000320580 IGKV3D-15A0A087WSY6 115 aa13.38□□□□□ -0.27
PACS1-201ENST00000320580 CECR9P0C854 216 aa13.38□□□□□ -0.27
PACS1-201ENST00000320580 IFITM1P13164 125 aa13.38□□□□□ -0.27
PACS1-201ENST00000320580 MRPL35Q9NZE8 188 aaKnown RBP13.38□□□□□ -0.27
PACS1-201ENST00000320580 IGHV3OR16-8A0A075B7F1 116 aa13.38□□□□□ -0.27
PACS1-201ENST00000320580 SRSF1Q07955 248 aaKnown RBP eCLIP13.38□□□□□ -0.27
PACS1-201ENST00000320580 FOXI1Q12951 378 aa13.38□□□□□ -0.27
PACS1-201ENST00000320580 ZNF688P0C7X2 276 aa13.38□□□□□ -0.27
PACS1-201ENST00000320580 MUC6Q6W4X9 2439 aa13.38□□□□□ -0.27
PACS1-201ENST00000320580 SLC25A39Q9BZJ4 359 aaPredicted RBP13.38□□□□□ -0.27
PACS1-201ENST00000320580 CRXO43186 299 aaPredicted RBP13.37□□□□□ -0.27
PACS1-201ENST00000320580 RAX2Q96IS3 184 aa13.37□□□□□ -0.27
PACS1-201ENST00000320580 FBXL15Q9H469 300 aa13.37□□□□□ -0.27
PACS1-201ENST00000320580 RPUSD1Q9UJJ7 312 aaKnown RBP13.37□□□□□ -0.27
PACS1-201ENST00000320580 M0R381 172 aa13.37□□□□□ -0.27
PACS1-201ENST00000320580 SH2D1AO60880 128 aa13.37□□□□□ -0.27
PACS1-201ENST00000320580 MT-ATP8P03928 68 aa13.37□□□□□ -0.27
PACS1-201ENST00000320580 LAGE3Q14657 143 aa13.37□□□□□ -0.27
PACS1-201ENST00000320580 UFSP1Q6NVU6 142 aa13.37□□□□□ -0.27
PACS1-201ENST00000320580 PLXNB1O43157 2135 aa13.37□□□□□ -0.27
PACS1-201ENST00000320580 CCL3L1P16619 93 aa13.37□□□□□ -0.27
PACS1-201ENST00000320580 IGKV2-40A0A087WW87 121 aaPredicted RBP13.36□□□□□ -0.27
PACS1-201ENST00000320580 IGKV2D-40P01614 121 aaPredicted RBP13.36□□□□□ -0.27
PACS1-201ENST00000320580 PLNP26678 52 aa13.36□□□□□ -0.27
PACS1-201ENST00000320580 KLRB1Q12918 225 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 276 ms