RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 TRAV2A0A0B4J234 112 aa10.25□□□□□ -0.77
PRPF18-201ENST00000320054 A0A1B0GV50 99 aa10.25□□□□□ -0.77
PRPF18-201ENST00000320054 TSPAN4O14817 238 aa10.25□□□□□ -0.77
PRPF18-201ENST00000320054 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.25□□□□□ -0.77
PRPF18-201ENST00000320054 SPATA3Q8NHX4 192 aa10.25□□□□□ -0.77
PRPF18-201ENST00000320054 NRN1Q9NPD7 142 aa10.25□□□□□ -0.77
PRPF18-201ENST00000320054 MANBALQ9NQG1 85 aa10.25□□□□□ -0.77
PRPF18-201ENST00000320054 A0A1W2PRE2 83 aa10.24□□□□□ -0.77
PRPF18-201ENST00000320054 NDUFB4O95168 129 aa10.24□□□□□ -0.77
PRPF18-201ENST00000320054 IFNA1P01562 189 aa10.24□□□□□ -0.77
PRPF18-201ENST00000320054 TAGLN2P37802 199 aaKnown RBP10.24□□□□□ -0.77
PRPF18-201ENST00000320054 RPL11P62913 178 aaKnown RBP10.24□□□□□ -0.77
PRPF18-201ENST00000320054 PAFAH1B2P68402 229 aa10.24□□□□□ -0.77
PRPF18-201ENST00000320054 PSG9Q00887 426 aa10.24□□□□□ -0.77
PRPF18-201ENST00000320054 CD300EQ496F6 205 aaPredicted RBP10.24□□□□□ -0.77
PRPF18-201ENST00000320054 RBPMS2Q6ZRY4 209 aaKnown RBP10.24□□□□□ -0.77
PRPF18-201ENST00000320054 TMEM61Q8N0U2 210 aa10.24□□□□□ -0.77
PRPF18-201ENST00000320054 LYPD1Q8N2G4 141 aa10.24□□□□□ -0.77
PRPF18-201ENST00000320054 BLNKQ8WV28 456 aa10.24□□□□□ -0.77
PRPF18-201ENST00000320054 SLC50A1Q9BRV3 221 aa10.24□□□□□ -0.77
PRPF18-201ENST00000320054 ANK2Q01484 3957 aa10.24□□□□□ -0.77
PRPF18-201ENST00000320054 SOCS3O14543 225 aa10.23□□□□□ -0.77
PRPF18-201ENST00000320054 WIPF1O43516 503 aa10.23□□□□□ -0.77
PRPF18-201ENST00000320054 GPR61Q9BZJ8 451 aa10.23□□□□□ -0.77
PRPF18-201ENST00000320054 MS4A6AQ9H2W1 248 aa10.23□□□□□ -0.77
PRPF18-201ENST00000320054 MED9Q9NWA0 146 aa10.23□□□□□ -0.77
PRPF18-201ENST00000320054 CLEC5AQ9NY25 188 aa10.23□□□□□ -0.77
PRPF18-201ENST00000320054 GNG13Q9P2W3 67 aa10.23□□□□□ -0.77
PRPF18-201ENST00000320054 SORL1Q92673 2214 aa10.22□□□□□ -0.77
PRPF18-201ENST00000320054 FAM74A7A6NL05 159 aa10.22□□□□□ -0.77
PRPF18-201ENST00000320054 K7EQG2 157 aa10.22□□□□□ -0.77
PRPF18-201ENST00000320054 SLC17A3O00476 420 aa10.22□□□□□ -0.77
PRPF18-201ENST00000320054 ISLRO14498 428 aa10.22□□□□□ -0.77
PRPF18-201ENST00000320054 SNRPCP09234 159 aaKnown RBP10.22□□□□□ -0.77
PRPF18-201ENST00000320054 PRR31Q5SQ13 230 aa10.22□□□□□ -0.77
PRPF18-201ENST00000320054 LCN12Q6JVE5 192 aa10.22□□□□□ -0.77
PRPF18-201ENST00000320054 DCANP1Q8TF63 244 aa10.22□□□□□ -0.77
PRPF18-201ENST00000320054 SPAG8Q99932 426 aaPredicted RBP10.22□□□□□ -0.77
PRPF18-201ENST00000320054 TXNDC17Q9BRA2 123 aa10.22□□□□□ -0.77
PRPF18-201ENST00000320054 NKX6-2Q9C056 277 aaPredicted RBP10.22□□□□□ -0.77
PRPF18-201ENST00000320054 ZNF331Q9NQX6 463 aaPredicted RBP10.22□□□□□ -0.77
PRPF18-201ENST00000320054 YTHDF2Q9Y5A9 579 aaKnown RBP10.22□□□□□ -0.77
PRPF18-201ENST00000320054 SELENOKQ9Y6D0 94 aa10.22□□□□□ -0.77
PRPF18-201ENST00000320054 NOTCH3Q9UM47 2321 aa10.22□□□□□ -0.77
PRPF18-201ENST00000320054 IGKV3-7A0A075B6H7 116 aa10.21□□□□□ -0.77
PRPF18-201ENST00000320054 H3BTX0 84 aa10.21□□□□□ -0.77
PRPF18-201ENST00000320054 DNASE2O00115 360 aaPredicted RBP10.21□□□□□ -0.77
PRPF18-201ENST00000320054 PAGE4O60829 102 aa10.21□□□□□ -0.77
PRPF18-201ENST00000320054 BCL2P10415 239 aa10.21□□□□□ -0.77
PRPF18-201ENST00000320054 UBE2G2P60604 165 aa10.21□□□□□ -0.77
PRPF18-201ENST00000320054 RANP62826 216 aaKnown RBP10.21□□□□□ -0.77
PRPF18-201ENST00000320054 GBGT1Q8N5D6 347 aa10.21□□□□□ -0.77
PRPF18-201ENST00000320054 C16orf92Q96LL3 132 aa10.21□□□□□ -0.77
PRPF18-201ENST00000320054 FAM210AQ96ND0 272 aa10.21□□□□□ -0.77
PRPF18-201ENST00000320054 Q9H3A6 140 aa10.21□□□□□ -0.77
PRPF18-201ENST00000320054 AAMDCQ9H7C9 122 aa10.21□□□□□ -0.77
PRPF18-201ENST00000320054 OTORQ9NRC9 128 aa10.21□□□□□ -0.77
PRPF18-201ENST00000320054 VAX2Q9UIW0 290 aa10.21□□□□□ -0.77
PRPF18-201ENST00000320054 PRELID1Q9Y255 219 aa10.21□□□□□ -0.77
PRPF18-201ENST00000320054 TRAV8-2A0A0B4J237 113 aa10.2□□□□□ -0.78
PRPF18-201ENST00000320054 LOC102723971A0A1B0GUV8 181 aa10.2□□□□□ -0.78
PRPF18-201ENST00000320054 LINC00862A6NCI5 91 aa10.2□□□□□ -0.78
PRPF18-201ENST00000320054 IZUMO1RA6ND01 250 aa10.2□□□□□ -0.78
PRPF18-201ENST00000320054 RBFOX3A6NFN3 312 aa10.2□□□□□ -0.78
PRPF18-201ENST00000320054 OR4C46A6NHA9 309 aa10.2□□□□□ -0.78
PRPF18-201ENST00000320054 NDUFS6O75380 124 aaKnown RBP10.2□□□□□ -0.78
PRPF18-201ENST00000320054 IGLL1P15814 213 aa10.2□□□□□ -0.78
PRPF18-201ENST00000320054 ID1P41134 155 aa10.2□□□□□ -0.78
PRPF18-201ENST00000320054 HAGHQ16775 308 aa10.2□□□□□ -0.78
PRPF18-201ENST00000320054 ZNF506Q5JVG8 444 aa10.2□□□□□ -0.78
PRPF18-201ENST00000320054 ARL6IP6Q8N6S5 226 aa10.2□□□□□ -0.78
PRPF18-201ENST00000320054 TCEAL7Q9BRU2 100 aa10.2□□□□□ -0.78
PRPF18-201ENST00000320054 RAB19A4D1S5 217 aa10.19□□□□□ -0.78
PRPF18-201ENST00000320054 GGTLC3B5MD39 225 aa10.19□□□□□ -0.78
PRPF18-201ENST00000320054 MEF2BQ02080 365 aaPredicted RBP10.19□□□□□ -0.78
PRPF18-201ENST00000320054 ICAM4Q14773 271 aa10.19□□□□□ -0.78
PRPF18-201ENST00000320054 CST9LP1Q5W188 147 aa10.19□□□□□ -0.78
PRPF18-201ENST00000320054 CCDC28AQ8IWP9 274 aa10.19□□□□□ -0.78
PRPF18-201ENST00000320054 MRPL53Q96EL3 112 aaKnown RBP10.19□□□□□ -0.78
PRPF18-201ENST00000320054 SMDT1Q9H4I9 107 aa10.19□□□□□ -0.78
PRPF18-201ENST00000320054 ZNF256Q9Y2P7 627 aaPredicted RBP10.19□□□□□ -0.78
PRPF18-201ENST00000320054 TRRAPQ9Y4A5 3859 aa10.18□□□□□ -0.78
PRPF18-201ENST00000320054 PGPA6NDG6 321 aa10.18□□□□□ -0.78
PRPF18-201ENST00000320054 C11orf94C9JXX5 98 aa10.18□□□□□ -0.78
PRPF18-201ENST00000320054 TFPI2P48307 235 aa10.18□□□□□ -0.78
PRPF18-201ENST00000320054 SNRPD3P62318 126 aaKnown RBP10.18□□□□□ -0.78
PRPF18-201ENST00000320054 SUMO1P63165 101 aaKnown RBP10.18□□□□□ -0.78
PRPF18-201ENST00000320054 PSG3Q16557 428 aa10.18□□□□□ -0.78
PRPF18-201ENST00000320054 BEAN1Q3B7T3 259 aa10.18□□□□□ -0.78
PRPF18-201ENST00000320054 TOR2AQ5JU69 321 aa10.18□□□□□ -0.78
PRPF18-201ENST00000320054 WFDC3Q8IUB2 231 aa10.18□□□□□ -0.78
PRPF18-201ENST00000320054 EXOC3-AS1Q8N2X6 119 aa10.18□□□□□ -0.78
PRPF18-201ENST00000320054 C5orf17Q8NAS9 161 aa10.18□□□□□ -0.78
PRPF18-201ENST00000320054 RXFP4Q8TDU9 374 aa10.18□□□□□ -0.78
PRPF18-201ENST00000320054 ATP5G3P48201 142 aa10.17□□□□□ -0.78
PRPF18-201ENST00000320054 CMC4P56277 68 aaPredicted RBP10.17□□□□□ -0.78
PRPF18-201ENST00000320054 PEA15Q15121 130 aa10.17□□□□□ -0.78
PRPF18-201ENST00000320054 GUCA2BQ16661 112 aa10.17□□□□□ -0.78
PRPF18-201ENST00000320054 CMTM2Q8TAZ6 248 aa10.17□□□□□ -0.78
PRPF18-201ENST00000320054 RARRES2Q99969 163 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms