RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 ATP5IP56385 69 aaPredicted RBP7.2□□□□□ -1.26
USF3-201ENST00000316407 FNDC1Q4ZHG4 1894 aaPredicted RBP7.19□□□□□ -1.26
USF3-201ENST00000316407 TRAV3A0A0B4J244 114 aa7.19□□□□□ -1.26
USF3-201ENST00000316407 A0A1B0GW64 132 aa7.19□□□□□ -1.26
USF3-201ENST00000316407 TCTEX1D4Q5JR98 221 aa7.19□□□□□ -1.26
USF3-201ENST00000316407 C10orf55Q5SWW7 151 aa7.19□□□□□ -1.26
USF3-201ENST00000316407 C8orf46Q8TAG6 207 aa7.19□□□□□ -1.26
USF3-201ENST00000316407 GHRHP01286 108 aa7.19□□□□□ -1.26
USF3-201ENST00000316407 PRIMA1Q86XR5 153 aa7.19□□□□□ -1.26
USF3-201ENST00000316407 SIGLEC12Q96PQ1 595 aa7.19□□□□□ -1.26
USF3-201ENST00000316407 NBR2O15453 112 aa7.19□□□□□ -1.26
USF3-201ENST00000316407 ERCC8Q13216 396 aa7.19□□□□□ -1.26
USF3-201ENST00000316407 LINC01560Q8TB33 94 aa7.19□□□□□ -1.26
USF3-201ENST00000316407 CECR9P0C854 216 aa7.19□□□□□ -1.26
USF3-201ENST00000316407 COX6A1P12074 109 aa7.19□□□□□ -1.26
USF3-201ENST00000316407 RBMY1FQ15415 496 aaKnown RBP7.19□□□□□ -1.26
USF3-201ENST00000316407 Q6ZT83 130 aa7.19□□□□□ -1.26
USF3-201ENST00000316407 LYZL4Q96KX0 146 aa7.19□□□□□ -1.26
USF3-201ENST00000316407 KLF2Q9Y5W3 355 aaPredicted RBP7.19□□□□□ -1.26
USF3-201ENST00000316407 SPAARA0A1B0GVQ0 90 aa7.19□□□□□ -1.26
USF3-201ENST00000316407 LINC01549A6NIU2 74 aa7.19□□□□□ -1.26
USF3-201ENST00000316407 IGHG4P01861 327 aa7.19□□□□□ -1.26
USF3-201ENST00000316407 LINC00205P59089 165 aa7.19□□□□□ -1.26
USF3-201ENST00000316407 LILRA6Q6PI73 481 aa7.19□□□□□ -1.26
USF3-201ENST00000316407 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.19□□□□□ -1.26
USF3-201ENST00000316407 ZC2HC1AQ96GY0 325 aa7.19□□□□□ -1.26
USF3-201ENST00000316407 UPK2O00526 184 aa7.19□□□□□ -1.26
USF3-201ENST00000316407 SLC50A1Q9BRV3 221 aa7.19□□□□□ -1.26
USF3-201ENST00000316407 ADAMTS7Q9UKP4 1686 aa7.19□□□□□ -1.26
USF3-201ENST00000316407 TIMM23O14925 209 aa7.19□□□□□ -1.26
USF3-201ENST00000316407 CRYBA4P53673 196 aa7.19□□□□□ -1.26
USF3-201ENST00000316407 ZCCHC24Q8N2G6 241 aaKnown RBP7.19□□□□□ -1.26
USF3-201ENST00000316407 PLEKHB2Q96CS7 222 aa7.19□□□□□ -1.26
USF3-201ENST00000316407 CEND1Q8N111 149 aa7.19□□□□□ -1.26
USF3-201ENST00000316407 C8orf49Q96NF6 230 aa7.19□□□□□ -1.26
USF3-201ENST00000316407 RCHY1Q96PM5 261 aa7.19□□□□□ -1.26
USF3-201ENST00000316407 MRPL27Q9P0M9 148 aaKnown RBP7.19□□□□□ -1.26
USF3-201ENST00000316407 TRGV1A0A0A0MS02 117 aa7.18□□□□□ -1.26
USF3-201ENST00000316407 TMEM213A2RRL7 107 aa7.18□□□□□ -1.26
USF3-201ENST00000316407 J3QRE1 110 aa7.18□□□□□ -1.26
USF3-201ENST00000316407 TIAF1O95411 115 aa7.18□□□□□ -1.26
USF3-201ENST00000316407 C18orf32Q8TCD1 76 aa7.18□□□□□ -1.26
USF3-201ENST00000316407 OVOL2Q9BRP0 275 aa7.18□□□□□ -1.26
USF3-201ENST00000316407 PSG7Q13046 419 aa7.18□□□□□ -1.26
USF3-201ENST00000316407 C15orf53Q8NAA6 179 aa7.18□□□□□ -1.26
USF3-201ENST00000316407 INAFM2P0DMQ5 153 aa7.18□□□□□ -1.26
USF3-201ENST00000316407 FNDC10F2Z333 226 aa7.18□□□□□ -1.26
USF3-201ENST00000316407 SOCS3O14543 225 aa7.18□□□□□ -1.26
USF3-201ENST00000316407 IGLL1P15814 213 aa7.18□□□□□ -1.26
USF3-201ENST00000316407 ZNF876PQ49A33 203 aa7.18□□□□□ -1.26
USF3-201ENST00000316407 C11orf44Q8N8P7 122 aa7.18□□□□□ -1.26
USF3-201ENST00000316407 TP53TG1Q9Y2A0 90 aa7.18□□□□□ -1.26
USF3-201ENST00000316407 PRRC2AP48634 2157 aaKnown RBP7.18□□□□□ -1.26
USF3-201ENST00000316407 IGHV1-24A0A0C4DH33 117 aa7.18□□□□□ -1.26
USF3-201ENST00000316407 SH2D6Q7Z4S9 175 aa7.18□□□□□ -1.26
USF3-201ENST00000316407 ZNF329Q86UD4 541 aa7.18□□□□□ -1.26
USF3-201ENST00000316407 ZNF581Q9P0T4 197 aa7.18□□□□□ -1.26
USF3-201ENST00000316407 DUTP33316 252 aaKnown RBP7.18□□□□□ -1.26
USF3-201ENST00000316407 TMEM219Q86XT9 240 aa7.18□□□□□ -1.26
USF3-201ENST00000316407 FAM57AQ8TBR7 257 aa7.18□□□□□ -1.26
USF3-201ENST00000316407 TRAV25A0A0B4J276 109 aa7.18□□□□□ -1.26
USF3-201ENST00000316407 IQCF6A8MYZ5 107 aa7.18□□□□□ -1.26
USF3-201ENST00000316407 ARMS2P0C7Q2 107 aa7.18□□□□□ -1.26
USF3-201ENST00000316407 SLC25A16P16260 332 aa7.18□□□□□ -1.26
USF3-201ENST00000316407 DUSP15Q9H1R2 295 aaPredicted RBP7.18□□□□□ -1.26
USF3-201ENST00000316407 C15orf32Q32M92 178 aa7.18□□□□□ -1.26
USF3-201ENST00000316407 CTHRC1Q96CG8 243 aa7.17□□□□□ -1.26
USF3-201ENST00000316407 LINC00527Q9UJ94 153 aa7.17□□□□□ -1.26
USF3-201ENST00000316407 EFEMP2O95967 443 aa7.17□□□□□ -1.26
USF3-201ENST00000316407 C6orf226Q5I0X4 101 aa7.17□□□□□ -1.26
USF3-201ENST00000316407 F8WEM9 126 aa7.17□□□□□ -1.26
USF3-201ENST00000316407 PVRIGQ6DKI7 326 aa7.17□□□□□ -1.26
USF3-201ENST00000316407 KIAA1671Q9BY89 1806 aa7.17□□□□□ -1.26
USF3-201ENST00000316407 IFNL4K9M1U5 179 aa7.17□□□□□ -1.26
USF3-201ENST00000316407 DNAJC30Q96LL9 226 aa7.17□□□□□ -1.26
USF3-201ENST00000316407 CHCHD2Q9Y6H1 151 aaPredicted RBP7.17□□□□□ -1.26
USF3-201ENST00000316407 WDR87Q6ZQQ6 2873 aa7.17□□□□□ -1.26
USF3-201ENST00000316407 WIPF3A6NGB9 483 aa7.17□□□□□ -1.26
USF3-201ENST00000316407 RNASE8Q8TDE3 154 aaKnown RBP7.17□□□□□ -1.26
USF3-201ENST00000316407 TM4SF5O14894 197 aa7.17□□□□□ -1.26
USF3-201ENST00000316407 MYOD1P15172 320 aa7.17□□□□□ -1.26
USF3-201ENST00000316407 SAP30O75446 220 aa7.17□□□□□ -1.26
USF3-201ENST00000316407 ANKRD29Q8N6D5 301 aa7.17□□□□□ -1.26
USF3-201ENST00000316407 LINC00477Q96M19 166 aa7.17□□□□□ -1.26
USF3-201ENST00000316407 ANAPC10Q9UM13 185 aa7.17□□□□□ -1.26
USF3-201ENST00000316407 MYMXA0A1B0GTQ4 84 aa7.17□□□□□ -1.26
USF3-201ENST00000316407 SHISA9B4DS77 424 aa7.16□□□□□ -1.26
USF3-201ENST00000316407 ID3Q02535 119 aa7.16□□□□□ -1.26
USF3-201ENST00000316407 VGLL1Q99990 258 aa7.16□□□□□ -1.26
USF3-201ENST00000316407 RNASE13Q5GAN3 156 aaKnown RBP7.16□□□□□ -1.26
USF3-201ENST00000316407 LINC00312Q9Y6C7 94 aa7.16□□□□□ -1.26
USF3-201ENST00000316407 BRK1Q8WUW1 75 aa7.16□□□□□ -1.26
USF3-201ENST00000316407 IGKV1-27A0A075B6S5 117 aa7.16□□□□□ -1.26
USF3-201ENST00000316407 CRLF1O75462 422 aa7.16□□□□□ -1.26
USF3-201ENST00000316407 NTF4P34130 210 aa7.16□□□□□ -1.26
USF3-201ENST00000316407 DPM3Q9P2X0 92 aa7.16□□□□□ -1.26
USF3-201ENST00000316407 TEX48A0A1B0GUV7 120 aa7.16□□□□□ -1.26
USF3-201ENST00000316407 NEGR1Q7Z3B1 354 aa7.16□□□□□ -1.26
USF3-201ENST00000316407 PRSS47A8MTI9 375 aa7.16□□□□□ -1.26
USF3-201ENST00000316407 APOBEC3AP31941 199 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms