RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 IGFBPL1Q8WX77 278 aa10.88□□□□□ -0.67
RFFL-201ENST00000315249 ZNF876PQ49A33 203 aa10.87□□□□□ -0.67
RFFL-201ENST00000315249 PHLDA1Q8WV24 401 aaPredicted RBP10.87□□□□□ -0.67
RFFL-201ENST00000315249 COL4A3Q01955 1670 aa10.87□□□□□ -0.67
RFFL-201ENST00000315249 A0A1B0GW15 77 aa10.87□□□□□ -0.67
RFFL-201ENST00000315249 FAM19A2Q8N3H0 131 aa10.87□□□□□ -0.67
RFFL-201ENST00000315249 WFDC1Q9HC57 220 aa10.87□□□□□ -0.67
RFFL-201ENST00000315249 RNF182Q8N6D2 247 aa10.87□□□□□ -0.67
RFFL-201ENST00000315249 TSSC4Q9Y5U2 329 aaPredicted RBP10.87□□□□□ -0.67
RFFL-201ENST00000315249 VPREB3Q9UKI3 123 aa10.87□□□□□ -0.67
RFFL-201ENST00000315249 ERASQ7Z444 233 aa10.87□□□□□ -0.67
RFFL-201ENST00000315249 H0YIZ8 118 aa10.87□□□□□ -0.67
RFFL-201ENST00000315249 RNASE2P10153 161 aaKnown RBP10.87□□□□□ -0.67
RFFL-201ENST00000315249 SUPT4H1P63272 117 aaKnown RBP10.86□□□□□ -0.67
RFFL-201ENST00000315249 SRSF1Q07955 248 aaKnown RBP eCLIP10.86□□□□□ -0.67
RFFL-201ENST00000315249 LHFPL1Q86WI0 220 aa10.86□□□□□ -0.67
RFFL-201ENST00000315249 TEX36Q5VZQ5 186 aa10.86□□□□□ -0.67
RFFL-201ENST00000315249 TRAV8-1A0A0A6YYK1 113 aa10.86□□□□□ -0.67
RFFL-201ENST00000315249 HOXB4P17483 251 aaPredicted RBP10.86□□□□□ -0.67
RFFL-201ENST00000315249 CYSLTR1Q9Y271 337 aa10.86□□□□□ -0.67
RFFL-201ENST00000315249 RPL23P62829 140 aaKnown RBP10.86□□□□□ -0.67
RFFL-201ENST00000315249 OCC1Q8TAD7 63 aa10.86□□□□□ -0.67
RFFL-201ENST00000315249 TCF23Q7RTU1 214 aa10.86□□□□□ -0.67
RFFL-201ENST00000315249 SRSF8Q9BRL6 282 aaKnown RBP10.86□□□□□ -0.67
RFFL-201ENST00000315249 CACNA1AO00555 2505 aa10.86□□□□□ -0.67
RFFL-201ENST00000315249 CCL24O00175 119 aa10.86□□□□□ -0.67
RFFL-201ENST00000315249 SNAI2O43623 268 aa10.86□□□□□ -0.67
RFFL-201ENST00000315249 MMP23AO75900 390 aa10.86□□□□□ -0.67
RFFL-201ENST00000315249 DKK1O94907 266 aa10.86□□□□□ -0.67
RFFL-201ENST00000315249 DEFB136Q30KP8 78 aa10.86□□□□□ -0.67
RFFL-201ENST00000315249 QRFPP83859 136 aa10.85□□□□□ -0.67
RFFL-201ENST00000315249 LY6G6FQ5SQ64 297 aa10.85□□□□□ -0.67
RFFL-201ENST00000315249 NCOA6Q14686 2063 aaPredicted RBP10.85□□□□□ -0.67
RFFL-201ENST00000315249 C22orf46C9J442 243 aa10.85□□□□□ -0.67
RFFL-201ENST00000315249 ETV2O00321 342 aaPredicted RBP10.85□□□□□ -0.67
RFFL-201ENST00000315249 FHL1Q13642 323 aa10.85□□□□□ -0.67
RFFL-201ENST00000315249 IGHV4-38-2P0DP08 117 aa10.85□□□□□ -0.67
RFFL-201ENST00000315249 A0A087WWL8 130 aa10.85□□□□□ -0.67
RFFL-201ENST00000315249 LOC102724200A0A096LPH7 203 aaPredicted RBP10.85□□□□□ -0.67
RFFL-201ENST00000315249 DIAPH2-AS1Q14236 149 aa10.85□□□□□ -0.67
RFFL-201ENST00000315249 PSG3Q16557 428 aa10.85□□□□□ -0.67
RFFL-201ENST00000315249 SLC25A34Q6PIV7 304 aa10.84□□□□□ -0.67
RFFL-201ENST00000315249 TMEM95Q3KNT9 176 aa10.84□□□□□ -0.67
RFFL-201ENST00000315249 NMSQ5H8A3 153 aa10.84□□□□□ -0.67
RFFL-201ENST00000315249 PRR31Q5SQ13 230 aa10.84□□□□□ -0.67
RFFL-201ENST00000315249 LINC00469Q8N7U9 141 aa10.84□□□□□ -0.67
RFFL-201ENST00000315249 PRORYQ9H606 182 aa10.84□□□□□ -0.67
RFFL-201ENST00000315249 LMO1P25800 156 aa10.84□□□□□ -0.67
RFFL-201ENST00000315249 ZNF833PQ6ZTB9 187 aa10.84□□□□□ -0.67
RFFL-201ENST00000315249 PGPEP1Q9NXJ5 209 aa10.84□□□□□ -0.67
RFFL-201ENST00000315249 NUDT10Q8NFP7 164 aa10.84□□□□□ -0.67
RFFL-201ENST00000315249 NRN1Q9NPD7 142 aa10.84□□□□□ -0.67
RFFL-201ENST00000315249 IGHV3-16A0A0C4DH30 117 aa10.84□□□□□ -0.67
RFFL-201ENST00000315249 RBMY1BA6NDE4 496 aaKnown RBP10.83□□□□□ -0.68
RFFL-201ENST00000315249 RBMY1EA6NEQ0 496 aaKnown RBP10.83□□□□□ -0.68
RFFL-201ENST00000315249 KNCNA6PVL3 124 aa10.83□□□□□ -0.68
RFFL-201ENST00000315249 RBMY1DP0C7P1 496 aaKnown RBP10.83□□□□□ -0.68
RFFL-201ENST00000315249 RBMY1A1P0DJD3 496 aaKnown RBP10.83□□□□□ -0.68
RFFL-201ENST00000315249 RBMY1CP0DJD4 496 aa10.83□□□□□ -0.68
RFFL-201ENST00000315249 SLC25A20O43772 301 aa10.83□□□□□ -0.68
RFFL-201ENST00000315249 IGHV4-39P01824 125 aa10.83□□□□□ -0.68
RFFL-201ENST00000315249 RPLP1P05386 114 aaKnown RBP10.83□□□□□ -0.68
RFFL-201ENST00000315249 OR5A1Q8NGJ0 315 aa10.83□□□□□ -0.68
RFFL-201ENST00000315249 PKIAP61925 76 aa10.83□□□□□ -0.68
RFFL-201ENST00000315249 NUDT11Q96G61 164 aa10.83□□□□□ -0.68
RFFL-201ENST00000315249 SPOCK3Q9BQ16 436 aa10.83□□□□□ -0.68
RFFL-201ENST00000315249 TPSG1Q9NRR2 321 aa10.83□□□□□ -0.68
RFFL-201ENST00000315249 PIEZO1Q92508 2521 aa10.83□□□□□ -0.68
RFFL-201ENST00000315249 SH2D1AO60880 128 aa10.83□□□□□ -0.68
RFFL-201ENST00000315249 LINC00158P58513 81 aa10.83□□□□□ -0.68
RFFL-201ENST00000315249 PRO3102Q9H379 93 aa10.83□□□□□ -0.68
RFFL-201ENST00000315249 C15orf62A8K5M9 175 aa10.83□□□□□ -0.68
RFFL-201ENST00000315249 DKK4Q9UBT3 224 aa10.83□□□□□ -0.68
RFFL-201ENST00000315249 KLK9Q9UKQ9 250 aa10.83□□□□□ -0.68
RFFL-201ENST00000315249 A0A0G2JRQ6 117 aa10.83□□□□□ -0.68
RFFL-201ENST00000315249 C14orf178Q8N769 122 aaPredicted RBP10.83□□□□□ -0.68
RFFL-201ENST00000315249 NXT2Q9NPJ8 142 aaKnown RBP10.83□□□□□ -0.68
RFFL-201ENST00000315249 NCR2O95944 276 aa10.82□□□□□ -0.68
RFFL-201ENST00000315249 IGHV2-70P01814 119 aa10.82□□□□□ -0.68
RFFL-201ENST00000315249 IFT22Q9H7X7 185 aa10.82□□□□□ -0.68
RFFL-201ENST00000315249 APOMO95445 188 aa10.82□□□□□ -0.68
RFFL-201ENST00000315249 TCRAP04437 139 aa10.82□□□□□ -0.68
RFFL-201ENST00000315249 RFNGQ9Y644 331 aa10.82□□□□□ -0.68
RFFL-201ENST00000315249 TRAV12-2A0A075B6T6 113 aa10.82□□□□□ -0.68
RFFL-201ENST00000315249 CGB3P0DN86 165 aa10.82□□□□□ -0.68
RFFL-201ENST00000315249 C8orf86Q6ZUL3 223 aa10.82□□□□□ -0.68
RFFL-201ENST00000315249 C1orf159Q96HA4 380 aa10.82□□□□□ -0.68
RFFL-201ENST00000315249 FABP2P12104 132 aa10.82□□□□□ -0.68
RFFL-201ENST00000315249 FOXL1Q12952 345 aa10.82□□□□□ -0.68
RFFL-201ENST00000315249 SPRNQ5BIV9 151 aa10.82□□□□□ -0.68
RFFL-201ENST00000315249 GAGE12BA1L429 117 aa10.81□□□□□ -0.68
RFFL-201ENST00000315249 GAGE7O76087 117 aa10.81□□□□□ -0.68
RFFL-201ENST00000315249 GAGE12FP0CL80 117 aa10.81□□□□□ -0.68
RFFL-201ENST00000315249 GAGE12GP0CL81 117 aa10.81□□□□□ -0.68
RFFL-201ENST00000315249 GAGE12IP0CL82 117 aa10.81□□□□□ -0.68
RFFL-201ENST00000315249 AGMATQ9BSE5 352 aa10.81□□□□□ -0.68
RFFL-201ENST00000315249 SSBP2P81877 361 aaPredicted RBP10.81□□□□□ -0.68
RFFL-201ENST00000315249 C1QL4Q86Z23 238 aa10.81□□□□□ -0.68
RFFL-201ENST00000315249 IGKV1-6A0A0C4DH72 117 aa10.81□□□□□ -0.68
RFFL-201ENST00000315249 LYZL1Q6UWQ5 148 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms