RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 UNC79Q9P2D8 2635 aa12.86□□□□□ -0.35
CLCF1-201ENST00000312438 ZNF785A8K8V0 405 aa12.85□□□□□ -0.35
CLCF1-201ENST00000312438 C1orf196B1AJZ1 125 aa12.85□□□□□ -0.35
CLCF1-201ENST00000312438 RPS10P46783 165 aaKnown RBP12.85□□□□□ -0.35
CLCF1-201ENST00000312438 C10orf99Q6UWK7 81 aa12.85□□□□□ -0.35
CLCF1-201ENST00000312438 ARL6IP6Q8N6S5 226 aa12.85□□□□□ -0.35
CLCF1-201ENST00000312438 PYGO2Q9BRQ0 406 aa12.85□□□□□ -0.35
CLCF1-201ENST00000312438 OSTCQ9NRP0 149 aa12.85□□□□□ -0.35
CLCF1-201ENST00000312438 CCDC168Q8NDH2 2452 aa12.85□□□□□ -0.35
CLCF1-201ENST00000312438 A0A087X0K7 114 aa12.85□□□□□ -0.35
CLCF1-201ENST00000312438 K7EQM0 130 aa12.85□□□□□ -0.35
CLCF1-201ENST00000312438 ZNF207O43670 478 aaKnown RBP12.85□□□□□ -0.35
CLCF1-201ENST00000312438 APOHP02749 345 aaPredicted RBP12.85□□□□□ -0.35
CLCF1-201ENST00000312438 FOXL1Q12952 345 aa12.85□□□□□ -0.35
CLCF1-201ENST00000312438 CSN1S1P47710 185 aa12.84□□□□□ -0.35
CLCF1-201ENST00000312438 SCGB2A2Q13296 93 aa12.84□□□□□ -0.35
CLCF1-201ENST00000312438 UNQ9165/PRO28630Q6UXU0 137 aa12.84□□□□□ -0.35
CLCF1-201ENST00000312438 GOLT1AQ6ZVE7 132 aa12.84□□□□□ -0.35
CLCF1-201ENST00000312438 SGK494Q96LW2 274 aa12.84□□□□□ -0.35
CLCF1-201ENST00000312438 TMEM160Q9NX00 188 aa12.84□□□□□ -0.35
CLCF1-201ENST00000312438 ITPR3Q14573 2671 aa12.84□□□□□ -0.35
CLCF1-201ENST00000312438 IGHV3-66A0A0C4DH42 116 aa12.83□□□□□ -0.35
CLCF1-201ENST00000312438 TRBV6-1A0A0K0K1D8 114 aa12.83□□□□□ -0.35
CLCF1-201ENST00000312438 DIRC3C9JPN6 131 aa12.83□□□□□ -0.35
CLCF1-201ENST00000312438 LTAP01374 205 aa12.83□□□□□ -0.35
CLCF1-201ENST00000312438 RPLP1P05386 114 aaKnown RBP12.83□□□□□ -0.35
CLCF1-201ENST00000312438 MEOX2P50222 304 aa12.83□□□□□ -0.35
CLCF1-201ENST00000312438 C1QL4Q86Z23 238 aa12.83□□□□□ -0.35
CLCF1-201ENST00000312438 MLST8Q9BVC4 326 aa12.83□□□□□ -0.35
CLCF1-201ENST00000312438 TEX15Q9BXT5 2789 aa12.83□□□□□ -0.36
CLCF1-201ENST00000312438 IGHV3OR16-13A0A075B7E8 117 aa12.83□□□□□ -0.36
CLCF1-201ENST00000312438 IGHV3-74A0A0B4J1X5 117 aa12.83□□□□□ -0.36
CLCF1-201ENST00000312438 SERTM2A0A1B0GWG4 89 aa12.83□□□□□ -0.36
CLCF1-201ENST00000312438 ZNF320A2RRD8 509 aa12.83□□□□□ -0.36
CLCF1-201ENST00000312438 RAB5BP61020 215 aa12.83□□□□□ -0.36
CLCF1-201ENST00000312438 FAM106AQ4KMX7 169 aa12.83□□□□□ -0.36
CLCF1-201ENST00000312438 C16orf54Q6UWD8 224 aa12.83□□□□□ -0.36
CLCF1-201ENST00000312438 RNF152Q8N8N0 203 aa12.83□□□□□ -0.36
CLCF1-201ENST00000312438 NHLRC2Q8NBF2 726 aa12.83□□□□□ -0.36
CLCF1-201ENST00000312438 MYOZ3Q8TDC0 251 aa12.83□□□□□ -0.36
CLCF1-201ENST00000312438 BTF3L4Q96K17 158 aa12.83□□□□□ -0.36
CLCF1-201ENST00000312438 RNASE7Q9H1E1 156 aaKnown RBP12.83□□□□□ -0.36
CLCF1-201ENST00000312438 ZNF331Q9NQX6 463 aaPredicted RBP12.83□□□□□ -0.36
CLCF1-201ENST00000312438 BIN3Q9NQY0 253 aa12.83□□□□□ -0.36
CLCF1-201ENST00000312438 SERTAD4Q9NUC0 356 aa12.83□□□□□ -0.36
CLCF1-201ENST00000312438 V9GYV3 84 aa12.83□□□□□ -0.36
CLCF1-201ENST00000312438 GCN1Q92616 2671 aaKnown RBP12.82□□□□□ -0.36
CLCF1-201ENST00000312438 ZFHX3Q15911 3703 aa12.82□□□□□ -0.36
CLCF1-201ENST00000312438 IGHV3-49A0A0A0MS15 119 aa12.82□□□□□ -0.36
CLCF1-201ENST00000312438 A0A1W2PS18 150 aa12.82□□□□□ -0.36
CLCF1-201ENST00000312438 DNAJC9-AS1A6NH13 148 aa12.82□□□□□ -0.36
CLCF1-201ENST00000312438 M0R3E3 92 aa12.82□□□□□ -0.36
CLCF1-201ENST00000312438 IGLV2-11P01706 119 aa12.82□□□□□ -0.36
CLCF1-201ENST00000312438 FAM3BP58499 235 aaPredicted RBP12.82□□□□□ -0.36
CLCF1-201ENST00000312438 FLI1Q01543 452 aaPredicted RBP12.82□□□□□ -0.36
CLCF1-201ENST00000312438 IBA57Q5T440 356 aaKnown RBP12.82□□□□□ -0.36
CLCF1-201ENST00000312438 FAM231DQ6ZW35 169 aa12.82□□□□□ -0.36
CLCF1-201ENST00000312438 GPHB5Q86YW7 130 aa12.82□□□□□ -0.36
CLCF1-201ENST00000312438 TMEM75Q8N9X5 138 aa12.82□□□□□ -0.36
CLCF1-201ENST00000312438 UBE2E2Q96LR5 201 aa12.82□□□□□ -0.36
CLCF1-201ENST00000312438 IL36BQ9NZH7 164 aa12.82□□□□□ -0.36
CLCF1-201ENST00000312438 LOC105371267A0A1B0GV96 52 aa12.81□□□□□ -0.36
CLCF1-201ENST00000312438 A0A1W2PPQ1 181 aa12.81□□□□□ -0.36
CLCF1-201ENST00000312438 GRAMD2BQ96HH9 432 aa12.81□□□□□ -0.36
CLCF1-201ENST00000312438 FAM181BA6NEQ2 426 aa12.81□□□□□ -0.36
CLCF1-201ENST00000312438 K7EMT4 169 aa12.81□□□□□ -0.36
CLCF1-201ENST00000312438 PSG3Q16557 428 aa12.81□□□□□ -0.36
CLCF1-201ENST00000312438 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.81□□□□□ -0.36
CLCF1-201ENST00000312438 SLC50A1Q9BRV3 221 aa12.81□□□□□ -0.36
CLCF1-201ENST00000312438 ZFP30Q9Y2G7 519 aa12.81□□□□□ -0.36
CLCF1-201ENST00000312438 TRAV8-1A0A0A6YYK1 113 aa12.8□□□□□ -0.36
CLCF1-201ENST00000312438 PRNTQ86SH4 94 aa12.8□□□□□ -0.36
CLCF1-201ENST00000312438 Q86TA4 180 aa12.8□□□□□ -0.36
CLCF1-201ENST00000312438 TMEM183AQ8IXX5 376 aa12.8□□□□□ -0.36
CLCF1-201ENST00000312438 ZFP82Q8N141 532 aa12.8□□□□□ -0.36
CLCF1-201ENST00000312438 GLMPQ8WWB7 406 aa12.8□□□□□ -0.36
CLCF1-201ENST00000312438 SRD5A3Q9H8P0 318 aa12.8□□□□□ -0.36
CLCF1-201ENST00000312438 PSG8Q9UQ74 426 aa12.8□□□□□ -0.36
CLCF1-201ENST00000312438 LGALS1P09382 135 aaKnown RBP12.79□□□□□ -0.36
CLCF1-201ENST00000312438 RPEL1Q2QD12 228 aa12.79□□□□□ -0.36
CLCF1-201ENST00000312438 DAZ1Q9NQZ3 744 aaKnown RBP12.79□□□□□ -0.36
CLCF1-201ENST00000312438 TRAV9-1A0A075B6T8 112 aa12.78□□□□□ -0.36
CLCF1-201ENST00000312438 FBLL1A6NHQ2 334 aaKnown RBP12.78□□□□□ -0.36
CLCF1-201ENST00000312438 ZNF705GA8MUZ8 300 aaPredicted RBP12.78□□□□□ -0.36
CLCF1-201ENST00000312438 TYMSP04818 313 aa12.78□□□□□ -0.36
CLCF1-201ENST00000312438 LCN12Q6JVE5 192 aa12.78□□□□□ -0.36
CLCF1-201ENST00000312438 Q6ZSV7 163 aa12.78□□□□□ -0.36
CLCF1-201ENST00000312438 KLHDC1Q8N7A1 406 aa12.78□□□□□ -0.36
CLCF1-201ENST00000312438 NUDT10Q8NFP7 164 aa12.78□□□□□ -0.36
CLCF1-201ENST00000312438 NUDT11Q96G61 164 aa12.78□□□□□ -0.36
CLCF1-201ENST00000312438 ESM1Q9NQ30 184 aa12.78□□□□□ -0.36
CLCF1-201ENST00000312438 ITPR2Q14571 2701 aa12.78□□□□□ -0.36
CLCF1-201ENST00000312438 IGHV7-4-1A0A0J9YVY3 117 aa12.78□□□□□ -0.36
CLCF1-201ENST00000312438 PRR27Q6MZM9 219 aa12.78□□□□□ -0.36
CLCF1-201ENST00000312438 CLEC5AQ9NY25 188 aa12.78□□□□□ -0.36
CLCF1-201ENST00000312438 UFC1Q9Y3C8 167 aa12.78□□□□□ -0.36
CLCF1-201ENST00000312438 CHEK1O14757 476 aa12.77□□□□□ -0.37
CLCF1-201ENST00000312438 GATCO43716 136 aaKnown RBP12.77□□□□□ -0.37
CLCF1-201ENST00000312438 TRGC2P03986 189 aa12.77□□□□□ -0.37
CLCF1-201ENST00000312438 TM4SF20Q53R12 229 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms