RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 SPTBN1Q01082 2364 aaKnown RBP19.93■□□□□ 0.78
HOXB3-201ENST00000311626 IGHV3-35A0A0C4DH35 117 aa19.93■□□□□ 0.78
HOXB3-201ENST00000311626 APOHP02749 345 aaPredicted RBP19.93■□□□□ 0.78
HOXB3-201ENST00000311626 TSPOP30536 169 aa19.93■□□□□ 0.78
HOXB3-201ENST00000311626 MRPL52Q86TS9 123 aaKnown RBP19.93■□□□□ 0.78
HOXB3-201ENST00000311626 TMEM70Q9BUB7 260 aa19.93■□□□□ 0.78
HOXB3-201ENST00000311626 AKAP6Q13023 2319 aa19.93■□□□□ 0.78
HOXB3-201ENST00000311626 GNG7O60262 68 aa19.92■□□□□ 0.78
HOXB3-201ENST00000311626 NDPQ00604 133 aa19.92■□□□□ 0.78
HOXB3-201ENST00000311626 IGFL4Q6B9Z1 124 aa19.92■□□□□ 0.78
HOXB3-201ENST00000311626 PMCHL2Q9BQD1 86 aa19.92■□□□□ 0.78
HOXB3-201ENST00000311626 hDV102S1A0JD36 115 aa19.92■□□□□ 0.78
HOXB3-201ENST00000311626 LINC00614P0C842 121 aa19.92■□□□□ 0.78
HOXB3-201ENST00000311626 KLHDC1Q8N7A1 406 aa19.92■□□□□ 0.78
HOXB3-201ENST00000311626 ZNF414Q96IQ9 312 aa19.92■□□□□ 0.78
HOXB3-201ENST00000311626 NDUFB8O95169 186 aa19.91■□□□□ 0.78
HOXB3-201ENST00000311626 SVIPQ8NHG7 77 aa19.91■□□□□ 0.78
HOXB3-201ENST00000311626 TMUB1Q9BVT8 246 aa19.91■□□□□ 0.78
HOXB3-201ENST00000311626 HOXB4P17483 251 aaPredicted RBP19.91■□□□□ 0.78
HOXB3-201ENST00000311626 GFRA4Q9GZZ7 299 aa19.91■□□□□ 0.78
HOXB3-201ENST00000311626 FANCD2OSQ96PS1 177 aa19.9■□□□□ 0.78
HOXB3-201ENST00000311626 OR4C46A6NHA9 309 aa19.9■□□□□ 0.78
HOXB3-201ENST00000311626 LEPROTL1O95214 131 aa19.9■□□□□ 0.78
HOXB3-201ENST00000311626 LOC105371242A0A075B767 164 aa19.89■□□□□ 0.78
HOXB3-201ENST00000311626 ARL6IP6Q8N6S5 226 aa19.89■□□□□ 0.78
HOXB3-201ENST00000311626 RNF5Q99942 180 aa19.89■□□□□ 0.78
HOXB3-201ENST00000311626 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP19.89■□□□□ 0.77
HOXB3-201ENST00000311626 MRPS12O15235 138 aaKnown RBP19.89■□□□□ 0.77
HOXB3-201ENST00000311626 HAX1O00165 279 aa19.89■□□□□ 0.77
HOXB3-201ENST00000311626 PSG3Q16557 428 aa19.89■□□□□ 0.77
HOXB3-201ENST00000311626 C5orf64Q2M2E5 130 aa19.89■□□□□ 0.77
HOXB3-201ENST00000311626 SOX21Q9Y651 276 aaPredicted RBP19.89■□□□□ 0.77
HOXB3-201ENST00000311626 OR11H6Q8NGC7 330 aa19.88■□□□□ 0.77
HOXB3-201ENST00000311626 A0A1B0GUT8 65 aa19.88■□□□□ 0.77
HOXB3-201ENST00000311626 OR2T8A6NH00 312 aa19.88■□□□□ 0.77
HOXB3-201ENST00000311626 SYS1-DBNDD2H3BUS1 97 aa19.88■□□□□ 0.77
HOXB3-201ENST00000311626 RAB1BQ9H0U4 201 aa19.88■□□□□ 0.77
HOXB3-201ENST00000311626 ADORA2A-AS1P86434 159 aa19.87■□□□□ 0.77
HOXB3-201ENST00000311626 UNQ5815/PRO19632Q6UWF5 114 aa19.87■□□□□ 0.77
HOXB3-201ENST00000311626 IGKV2-40A0A087WW87 121 aaPredicted RBP19.87■□□□□ 0.77
HOXB3-201ENST00000311626 F8W735 103 aaPredicted RBP19.87■□□□□ 0.77
HOXB3-201ENST00000311626 NDUFS7O75251 213 aa19.87■□□□□ 0.77
HOXB3-201ENST00000311626 IGKV2D-40P01614 121 aaPredicted RBP19.87■□□□□ 0.77
HOXB3-201ENST00000311626 TMEM75Q8N9X5 138 aa19.87■□□□□ 0.77
HOXB3-201ENST00000311626 ZFHX3Q15911 3703 aa19.86■□□□□ 0.77
HOXB3-201ENST00000311626 WI2-2373I1.2A0A1W2PRP0 233 aa19.86■□□□□ 0.77
HOXB3-201ENST00000311626 C16orf54Q6UWD8 224 aa19.86■□□□□ 0.77
HOXB3-201ENST00000311626 NDFIP1Q9BT67 221 aa19.86■□□□□ 0.77
HOXB3-201ENST00000311626 SERTM2A0A1B0GWG4 89 aa19.85■□□□□ 0.77
HOXB3-201ENST00000311626 NDUFA3O95167 84 aa19.85■□□□□ 0.77
HOXB3-201ENST00000311626 HLA-DMBP28068 263 aa19.85■□□□□ 0.77
HOXB3-201ENST00000311626 NPBQ8NG41 125 aa19.85■□□□□ 0.77
HOXB3-201ENST00000311626 CHCHD1Q96BP2 118 aaKnown RBP19.85■□□□□ 0.77
HOXB3-201ENST00000311626 TIMD4Q96H15 378 aa19.85■□□□□ 0.77
HOXB3-201ENST00000311626 DMRTA1Q5VZB9 504 aa19.85■□□□□ 0.77
HOXB3-201ENST00000311626 ARPC1AQ92747 370 aa19.85■□□□□ 0.77
HOXB3-201ENST00000311626 C1RLQ9NZP8 487 aa19.85■□□□□ 0.77
HOXB3-201ENST00000311626 FAM106CPP0CH98 169 aa19.84■□□□□ 0.77
HOXB3-201ENST00000311626 FAM106AQ4KMX7 169 aa19.84■□□□□ 0.77
HOXB3-201ENST00000311626 VMO1Q7Z5L0 202 aa19.84■□□□□ 0.77
HOXB3-201ENST00000311626 IGLV11-55A0A075B6I3 123 aa19.84■□□□□ 0.77
HOXB3-201ENST00000311626 TMEM213A2RRL7 107 aa19.84■□□□□ 0.77
HOXB3-201ENST00000311626 K7EQM0 130 aa19.84■□□□□ 0.77
HOXB3-201ENST00000311626 CEACAM3P40198 252 aa19.84■□□□□ 0.77
HOXB3-201ENST00000311626 MFAP4P55083 255 aa19.84■□□□□ 0.77
HOXB3-201ENST00000311626 ZFP30Q9Y2G7 519 aa19.84■□□□□ 0.77
HOXB3-201ENST00000311626 FAM231BA6NCW3 169 aa19.83■□□□□ 0.77
HOXB3-201ENST00000311626 ZFP36P26651 326 aaKnown RBP19.83■□□□□ 0.77
HOXB3-201ENST00000311626 Q8TAT8 98 aa19.83■□□□□ 0.77
HOXB3-201ENST00000311626 SRSF8Q9BRL6 282 aaKnown RBP19.83■□□□□ 0.77
HOXB3-201ENST00000311626 LOC389332A0A1B0GUA5 103 aa19.83■□□□□ 0.76
HOXB3-201ENST00000311626 ODF3BA8MYP8 253 aa19.83■□□□□ 0.76
HOXB3-201ENST00000311626 RAXQ9Y2V3 346 aa19.83■□□□□ 0.76
HOXB3-201ENST00000311626 PRTN3P24158 256 aa19.82■□□□□ 0.76
HOXB3-201ENST00000311626 FXYD7P58549 80 aa19.82■□□□□ 0.76
HOXB3-201ENST00000311626 ERASQ7Z444 233 aa19.82■□□□□ 0.76
HOXB3-201ENST00000311626 C21orf62Q9NYP8 219 aa19.82■□□□□ 0.76
HOXB3-201ENST00000311626 TCF21O43680 179 aa19.81■□□□□ 0.76
HOXB3-201ENST00000311626 RIGQ13278 110 aa19.81■□□□□ 0.76
HOXB3-201ENST00000311626 LYZL1Q6UWQ5 148 aa19.81■□□□□ 0.76
HOXB3-201ENST00000311626 AAMDCQ9H7C9 122 aa19.81■□□□□ 0.76
HOXB3-201ENST00000311626 FAM162BQ5T6X4 162 aa19.8■□□□□ 0.76
HOXB3-201ENST00000311626 NEU4Q8WWR8 484 aaPredicted RBP19.8■□□□□ 0.76
HOXB3-201ENST00000311626 LOXL1Q08397 574 aaPredicted RBP19.8■□□□□ 0.76
HOXB3-201ENST00000311626 GAGE1Q13065 139 aa19.8■□□□□ 0.76
HOXB3-201ENST00000311626 FBXL19-AS1Q494R0 122 aa19.8■□□□□ 0.76
HOXB3-201ENST00000311626 ZNF562Q6V9R5 426 aa19.8■□□□□ 0.76
HOXB3-201ENST00000311626 MRPS16Q9Y3D3 137 aaKnown RBP19.79■□□□□ 0.76
HOXB3-201ENST00000311626 SH2D1AO60880 128 aa19.79■□□□□ 0.76
HOXB3-201ENST00000311626 CT45A10P0DMU9 189 aa19.79■□□□□ 0.76
HOXB3-201ENST00000311626 TRBV6-1A0A0K0K1D8 114 aa19.78■□□□□ 0.76
HOXB3-201ENST00000311626 A0A1W2PPR1 153 aa19.78■□□□□ 0.76
HOXB3-201ENST00000311626 RNF24Q9Y225 148 aa19.78■□□□□ 0.76
HOXB3-201ENST00000311626 LYPD1Q8N2G4 141 aa19.78■□□□□ 0.76
HOXB3-201ENST00000311626 VGLL1Q99990 258 aa19.78■□□□□ 0.76
HOXB3-201ENST00000311626 CRXO43186 299 aaPredicted RBP19.77■□□□□ 0.76
HOXB3-201ENST00000311626 NCR2O95944 276 aa19.77■□□□□ 0.76
HOXB3-201ENST00000311626 IFI27P40305 119 aaPredicted RBP19.77■□□□□ 0.76
HOXB3-201ENST00000311626 AMN1Q8IY45 258 aa19.77■□□□□ 0.76
HOXB3-201ENST00000311626 PRSS3P2Q8NHM4 247 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms