RNA–Protein interactions for RNA: ENST00000308588.9

SNUPN-201, Transcript of snurportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNUPN, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-201ENST00000308588 SAT2Q96F10 170 aaPredicted RBP16.29■□□□□ 0.2
SNUPN-201ENST00000308588 ZNF586Q9NXT0 402 aa16.29■□□□□ 0.2
SNUPN-201ENST00000308588 C1QBP02746 253 aa16.28■□□□□ 0.2
SNUPN-201ENST00000308588 PYYP10082 97 aa16.28■□□□□ 0.2
SNUPN-201ENST00000308588 RHOBP62745 196 aa16.28■□□□□ 0.2
SNUPN-201ENST00000308588 SERF2P84101 59 aa16.28■□□□□ 0.2
SNUPN-201ENST00000308588 LCN15Q6UWW0 184 aa16.28■□□□□ 0.2
SNUPN-201ENST00000308588 STHQ8IWL8 128 aa16.28■□□□□ 0.2
SNUPN-201ENST00000308588 RNF182Q8N6D2 247 aa16.28■□□□□ 0.2
SNUPN-201ENST00000308588 ZNF331Q9NQX6 463 aaPredicted RBP16.28■□□□□ 0.2
SNUPN-201ENST00000308588 COL7A1Q02388 2944 aa16.28■□□□□ 0.2
SNUPN-201ENST00000308588 KIR2DL5BA0A0G2JN68 375 aa16.27■□□□□ 0.2
SNUPN-201ENST00000308588 KIR2DL5BA0A0G2JPC4 375 aa16.27■□□□□ 0.2
SNUPN-201ENST00000308588 SLC17A3O00476 420 aa16.27■□□□□ 0.2
SNUPN-201ENST00000308588 GDF5OSQ5U4N7 250 aa16.27■□□□□ 0.2
SNUPN-201ENST00000308588 TRPT1Q86TN4 253 aaKnown RBP16.27■□□□□ 0.2
SNUPN-201ENST00000308588 KIR2DL5AQ8N109 375 aa16.27■□□□□ 0.2
SNUPN-201ENST00000308588 KIR2DL5BQ8NHK3 375 aa16.27■□□□□ 0.2
SNUPN-201ENST00000308588 LRRC20Q8TCA0 184 aa16.27■□□□□ 0.2
SNUPN-201ENST00000308588 HIST1H1EP10412 219 aaKnown RBP16.26■□□□□ 0.19
SNUPN-201ENST00000308588 HLA-DMBP28068 263 aa16.26■□□□□ 0.19
SNUPN-201ENST00000308588 APOC4P55056 127 aa16.26■□□□□ 0.19
SNUPN-201ENST00000308588 GUK1Q16774 197 aa16.26■□□□□ 0.19
SNUPN-201ENST00000308588 OR10G4Q8NGN3 311 aa16.26■□□□□ 0.19
SNUPN-201ENST00000308588 OR10G9Q8NGN4 311 aa16.26■□□□□ 0.19
SNUPN-201ENST00000308588 OR10G7Q8NGN6 311 aa16.26■□□□□ 0.19
SNUPN-201ENST00000308588 ZNF503Q96F45 646 aa16.26■□□□□ 0.19
SNUPN-201ENST00000308588 OR51M1Q9H341 326 aa16.26■□□□□ 0.19
SNUPN-201ENST00000308588 SAV1Q9H4B6 383 aaPredicted RBP16.26■□□□□ 0.19
SNUPN-201ENST00000308588 RPRMQ9NS64 109 aa16.26■□□□□ 0.19
SNUPN-201ENST00000308588 H3BMM0 161 aa16.25■□□□□ 0.19
SNUPN-201ENST00000308588 EIF3GO75821 320 aaKnown RBP eCLIP16.25■□□□□ 0.19
SNUPN-201ENST00000308588 LGALSLQ3ZCW2 172 aaPredicted RBP16.25■□□□□ 0.19
SNUPN-201ENST00000308588 FOXI2Q6ZQN5 318 aa16.25■□□□□ 0.19
SNUPN-201ENST00000308588 TMUB2Q71RG4 321 aa16.25■□□□□ 0.19
SNUPN-201ENST00000308588 RPP25LQ8N5L8 163 aaKnown RBP16.25■□□□□ 0.19
SNUPN-201ENST00000308588 SLC50A1Q9BRV3 221 aa16.25■□□□□ 0.19
SNUPN-201ENST00000308588 TRBV19A0A075B6N1 114 aa16.24■□□□□ 0.19
SNUPN-201ENST00000308588 F6UB75 175 aa16.24■□□□□ 0.19
SNUPN-201ENST00000308588 BCL2L11O43521 198 aa16.24■□□□□ 0.19
SNUPN-201ENST00000308588 HLA-DRB4P13762 266 aa16.24■□□□□ 0.19
SNUPN-201ENST00000308588 FAM122CQ6P4D5 195 aa16.24■□□□□ 0.19
SNUPN-201ENST00000308588 PAXXQ9BUH6 204 aa16.24■□□□□ 0.19
SNUPN-201ENST00000308588 CSTL1Q9H114 145 aa16.24■□□□□ 0.19
SNUPN-201ENST00000308588 HLA-DRB4X5D2U9 266 aa16.24■□□□□ 0.19
SNUPN-201ENST00000308588 A0A1W2PPV4 95 aa16.24■□□□□ 0.19
SNUPN-201ENST00000308588 KANTRA0A1W2PQU2 76 aa16.24■□□□□ 0.19
SNUPN-201ENST00000308588 MBP02144 154 aa16.24■□□□□ 0.19
SNUPN-201ENST00000308588 PSG3Q16557 428 aa16.24■□□□□ 0.19
SNUPN-201ENST00000308588 FXYD5Q96DB9 178 aa16.24■□□□□ 0.19
SNUPN-201ENST00000308588 HYLS1Q96M11 299 aa16.24■□□□□ 0.19
SNUPN-201ENST00000308588 SPATA25Q9BR10 227 aa16.24■□□□□ 0.19
SNUPN-201ENST00000308588 ZMAT4Q9H898 229 aa16.24■□□□□ 0.19
SNUPN-201ENST00000308588 UBE2CO00762 179 aa16.23■□□□□ 0.19
SNUPN-201ENST00000308588 ZNF253O75346 499 aa16.23■□□□□ 0.19
SNUPN-201ENST00000308588 NDUFB4O95168 129 aa16.23■□□□□ 0.19
SNUPN-201ENST00000308588 TAS2R45P59539 299 aa16.23■□□□□ 0.19
SNUPN-201ENST00000308588 RNF141Q8WVD5 230 aa16.23■□□□□ 0.19
SNUPN-201ENST00000308588 RETNQ9HD89 108 aa16.23■□□□□ 0.19
SNUPN-201ENST00000308588 A0A0J9YX75 114 aa16.22■□□□□ 0.19
SNUPN-201ENST00000308588 OR7C2O60412 319 aa16.22■□□□□ 0.19
SNUPN-201ENST00000308588 OR10J4P0C629 311 aa16.22■□□□□ 0.19
SNUPN-201ENST00000308588 NBEAP1P0C6P0 100 aa16.22■□□□□ 0.19
SNUPN-201ENST00000308588 SPP1P10451 314 aa16.22■□□□□ 0.19
SNUPN-201ENST00000308588 KHDC3LQ587J8 217 aa16.22■□□□□ 0.19
SNUPN-201ENST00000308588 BLNKQ8WV28 456 aa16.22■□□□□ 0.19
SNUPN-201ENST00000308588 ZNF471Q9BX82 626 aaPredicted RBP16.22■□□□□ 0.19
SNUPN-201ENST00000308588 CDC34P49427 236 aaPredicted RBP16.21■□□□□ 0.19
SNUPN-201ENST00000308588 PDE6HQ13956 83 aa16.21■□□□□ 0.19
SNUPN-201ENST00000308588 TMEM41BQ5BJD5 291 aa16.21■□□□□ 0.19
SNUPN-201ENST00000308588 EBLN2Q6P2I7 272 aa16.21■□□□□ 0.19
SNUPN-201ENST00000308588 Q6ZWC4 215 aa16.21■□□□□ 0.19
SNUPN-201ENST00000308588 ZNF738Q8NE65 137 aa16.21■□□□□ 0.19
SNUPN-201ENST00000308588 NBEAL2Q6ZNJ1 2754 aa16.21■□□□□ 0.19
SNUPN-201ENST00000308588 HMGB3O15347 200 aaKnown RBP16.2■□□□□ 0.18
SNUPN-201ENST00000308588 PFDN1O60925 122 aa16.2■□□□□ 0.18
SNUPN-201ENST00000308588 GIG44P09565 113 aaPredicted RBP16.2■□□□□ 0.18
SNUPN-201ENST00000308588 RAB24Q969Q5 203 aa16.2■□□□□ 0.18
SNUPN-201ENST00000308588 U3KQK5 164 aa16.2■□□□□ 0.18
SNUPN-201ENST00000308588 ZNF705FA8MVS1 300 aaPredicted RBP16.19■□□□□ 0.18
SNUPN-201ENST00000308588 PRB4P10163 310 aaPredicted RBP16.19■□□□□ 0.18
SNUPN-201ENST00000308588 CLUHP3Q96NS8 147 aa16.19■□□□□ 0.18
SNUPN-201ENST00000308588 RCHY1Q96PM5 261 aa16.19■□□□□ 0.18
SNUPN-201ENST00000308588 CLEC5AQ9NY25 188 aa16.19■□□□□ 0.18
SNUPN-201ENST00000308588 CA1P00915 261 aaPredicted RBP16.19■□□□□ 0.18
SNUPN-201ENST00000308588 IGKV3-20P01619 116 aa16.19■□□□□ 0.18
SNUPN-201ENST00000308588 ZNF705DP0CH99 300 aaPredicted RBP16.19■□□□□ 0.18
SNUPN-201ENST00000308588 ZNF705BP0CI00 300 aaPredicted RBP16.19■□□□□ 0.18
SNUPN-201ENST00000308588 DEFB135Q30KP9 77 aa16.19■□□□□ 0.18
SNUPN-201ENST00000308588 MORN3Q6PF18 240 aaPredicted RBP16.19■□□□□ 0.18
SNUPN-201ENST00000308588 PQLC2Q6ZP29 291 aa16.19■□□□□ 0.18
SNUPN-201ENST00000308588 OR4B1Q8NGF8 309 aa16.19■□□□□ 0.18
SNUPN-201ENST00000308588 RPUSD4Q96CM3 377 aaKnown RBP16.19■□□□□ 0.18
SNUPN-201ENST00000308588 OVOL2Q9BRP0 275 aa16.19■□□□□ 0.18
SNUPN-201ENST00000308588 TENM3Q9P273 2699 aa16.18■□□□□ 0.18
SNUPN-201ENST00000308588 STAG3L2P0CL84 134 aa16.18■□□□□ 0.18
SNUPN-201ENST00000308588 STAG3L3P0CL85 134 aa16.18■□□□□ 0.18
SNUPN-201ENST00000308588 C4BPBP20851 252 aa16.18■□□□□ 0.18
SNUPN-201ENST00000308588 UBE2L3P68036 154 aaKnown RBP16.18■□□□□ 0.18
SNUPN-201ENST00000308588 PSG9Q00887 426 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms