RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 RTL8AQ9BWD3 113 aa8.5□□□□□ -1.05
MSRB3-201ENST00000308259 IGKV3D-15A0A087WSY6 115 aa8.5□□□□□ -1.05
MSRB3-201ENST00000308259 OR1L4Q8NGR5 311 aa8.5□□□□□ -1.05
MSRB3-201ENST00000308259 DLX4Q92988 240 aaPredicted RBP8.5□□□□□ -1.05
MSRB3-201ENST00000308259 RPEQ96AT9 228 aa8.5□□□□□ -1.05
MSRB3-201ENST00000308259 TMEM126AQ9H061 195 aa8.5□□□□□ -1.05
MSRB3-201ENST00000308259 C17orf98A8MV24 154 aa8.5□□□□□ -1.05
MSRB3-201ENST00000308259 PRB4P10163 310 aaPredicted RBP8.5□□□□□ -1.05
MSRB3-201ENST00000308259 RIGQ13278 110 aa8.5□□□□□ -1.05
MSRB3-201ENST00000308259 FAM57AQ8TBR7 257 aa8.5□□□□□ -1.05
MSRB3-201ENST00000308259 PPDPFLQ8WWR9 84 aa8.5□□□□□ -1.05
MSRB3-201ENST00000308259 FBXL15Q9H469 300 aa8.5□□□□□ -1.05
MSRB3-201ENST00000308259 METRNQ9UJH8 293 aa8.5□□□□□ -1.05
MSRB3-201ENST00000308259 VPREB3Q9UKI3 123 aa8.5□□□□□ -1.05
MSRB3-201ENST00000308259 DMXL1Q9Y485 3027 aa8.5□□□□□ -1.05
MSRB3-201ENST00000308259 EPDR1Q9UM22 224 aa8.49□□□□□ -1.05
MSRB3-201ENST00000308259 NCBP2LA6PVI3 153 aaKnown RBP8.49□□□□□ -1.05
MSRB3-201ENST00000308259 TREML4Q6UXN2 200 aa8.49□□□□□ -1.05
MSRB3-201ENST00000308259 IFI27L1Q96BM0 104 aa8.49□□□□□ -1.05
MSRB3-201ENST00000308259 POLDIP2Q9Y2S7 368 aa8.49□□□□□ -1.05
MSRB3-201ENST00000308259 IGLL5B9A064 214 aa8.49□□□□□ -1.05
MSRB3-201ENST00000308259 MPV17P39210 176 aa8.49□□□□□ -1.05
MSRB3-201ENST00000308259 Q6ZR03 302 aa8.49□□□□□ -1.05
MSRB3-201ENST00000308259 J3QT63 122 aa8.49□□□□□ -1.05
MSRB3-201ENST00000308259 ZNF497Q6ZNH5 498 aa8.49□□□□□ -1.05
MSRB3-201ENST00000308259 LY96Q9Y6Y9 160 aa8.49□□□□□ -1.05
MSRB3-201ENST00000308259 TRAV2A0A0B4J234 112 aa8.48□□□□□ -1.05
MSRB3-201ENST00000308259 HOXA3O43365 443 aaPredicted RBP8.48□□□□□ -1.05
MSRB3-201ENST00000308259 REG1BP48304 166 aa8.48□□□□□ -1.05
MSRB3-201ENST00000308259 ZNF502Q8TBZ5 544 aa8.48□□□□□ -1.05
MSRB3-201ENST00000308259 ATMQ13315 3056 aa8.48□□□□□ -1.05
MSRB3-201ENST00000308259 PGPA6NDG6 321 aa8.48□□□□□ -1.05
MSRB3-201ENST00000308259 C12orf77C9JDV5 145 aa8.48□□□□□ -1.05
MSRB3-201ENST00000308259 TNFRSF1AP19438 455 aa8.48□□□□□ -1.05
MSRB3-201ENST00000308259 PDPNQ86YL7 162 aa8.48□□□□□ -1.05
MSRB3-201ENST00000308259 AAMDCQ9H7C9 122 aa8.48□□□□□ -1.05
MSRB3-201ENST00000308259 APC2O95996 2303 aa8.48□□□□□ -1.05
MSRB3-201ENST00000308259 SMIM27A0A1W2PRY6 76 aa8.48□□□□□ -1.05
MSRB3-201ENST00000308259 C9JAW5 83 aa8.48□□□□□ -1.05
MSRB3-201ENST00000308259 NCR2O95944 276 aa8.48□□□□□ -1.05
MSRB3-201ENST00000308259 COX6B1P14854 86 aa8.48□□□□□ -1.05
MSRB3-201ENST00000308259 ORM2P19652 201 aa8.48□□□□□ -1.05
MSRB3-201ENST00000308259 HSPE1P61604 102 aaKnown RBP8.48□□□□□ -1.05
MSRB3-201ENST00000308259 ZNF474Q6S9Z5 364 aaPredicted RBP8.48□□□□□ -1.05
MSRB3-201ENST00000308259 SRSF12Q8WXF0 261 aaKnown RBP8.48□□□□□ -1.05
MSRB3-201ENST00000308259 MGST2Q99735 147 aa8.48□□□□□ -1.05
MSRB3-201ENST00000308259 HIGD1AQ9Y241 93 aa8.48□□□□□ -1.05
MSRB3-201ENST00000308259 FOXE3Q13461 319 aa8.47□□□□□ -1.05
MSRB3-201ENST00000308259 ZNF56Q15929 161 aa8.47□□□□□ -1.05
MSRB3-201ENST00000308259 Q6ZS92 163 aa8.47□□□□□ -1.05
MSRB3-201ENST00000308259 RNF125Q96EQ8 232 aa8.47□□□□□ -1.05
MSRB3-201ENST00000308259 FOXC2Q99958 501 aa8.47□□□□□ -1.05
MSRB3-201ENST00000308259 PAXXQ9BUH6 204 aa8.47□□□□□ -1.05
MSRB3-201ENST00000308259 NPIPB6E9PJ23 425 aa8.47□□□□□ -1.05
MSRB3-201ENST00000308259 SS18L1O75177 396 aaPredicted RBP8.47□□□□□ -1.05
MSRB3-201ENST00000308259 NDUFV3P56181 108 aaKnown RBP8.47□□□□□ -1.05
MSRB3-201ENST00000308259 RPP21Q9H633 154 aaKnown RBP8.47□□□□□ -1.05
MSRB3-201ENST00000308259 SPRR3Q9UBC9 169 aa8.47□□□□□ -1.05
MSRB3-201ENST00000308259 A0A0U1RQV1 116 aa8.47□□□□□ -1.05
MSRB3-201ENST00000308259 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.47□□□□□ -1.05
MSRB3-201ENST00000308259 C8orf88P0DMB2 117 aa8.47□□□□□ -1.05
MSRB3-201ENST00000308259 IDI2-AS1Q9NZ38 188 aa8.47□□□□□ -1.05
MSRB3-201ENST00000308259 CSDC2Q9Y534 153 aaKnown RBP8.47□□□□□ -1.05
MSRB3-201ENST00000308259 DOPEY2Q9Y3R5 2298 aa8.47□□□□□ -1.05
MSRB3-201ENST00000308259 BRWD1-AS2P59051 145 aa8.47□□□□□ -1.05
MSRB3-201ENST00000308259 ZNF645Q8N7E2 425 aa8.47□□□□□ -1.05
MSRB3-201ENST00000308259 OR10J6PQ8NGY7 276 aa8.47□□□□□ -1.05
MSRB3-201ENST00000308259 LINC00473A8K010 186 aa8.46□□□□□ -1.05
MSRB3-201ENST00000308259 PEX7O00628 323 aa8.46□□□□□ -1.05
MSRB3-201ENST00000308259 IGHV3-48P01763 117 aa8.46□□□□□ -1.05
MSRB3-201ENST00000308259 AREGP15514 252 aa8.46□□□□□ -1.05
MSRB3-201ENST00000308259 CKS2P33552 79 aa8.46□□□□□ -1.05
MSRB3-201ENST00000308259 PRNTQ86SH4 94 aa8.46□□□□□ -1.05
MSRB3-201ENST00000308259 OTOGLQ3ZCN5 2332 aa8.46□□□□□ -1.05
MSRB3-201ENST00000308259 INTS1Q8N201 2190 aaKnown RBP8.46□□□□□ -1.06
MSRB3-201ENST00000308259 ZNF688P0C7X2 276 aa8.46□□□□□ -1.06
MSRB3-201ENST00000308259 IFI27P40305 119 aaPredicted RBP8.46□□□□□ -1.06
MSRB3-201ENST00000308259 C3orf36Q3SXR2 165 aa8.46□□□□□ -1.06
MSRB3-201ENST00000308259 LINC01545Q5VT33 79 aa8.46□□□□□ -1.06
MSRB3-201ENST00000308259 RBPMS2Q6ZRY4 209 aaKnown RBP8.46□□□□□ -1.06
MSRB3-201ENST00000308259 GCSAMQ8N6F7 178 aa8.46□□□□□ -1.06
MSRB3-201ENST00000308259 S1PR3Q99500 378 aa8.46□□□□□ -1.06
MSRB3-201ENST00000308259 ADGRG4Q8IZF6 3080 aa8.46□□□□□ -1.06
MSRB3-201ENST00000308259 NPIPB11E5RHQ5 1161 aa8.46□□□□□ -1.06
MSRB3-201ENST00000308259 KLF5Q13887 457 aaPredicted RBP8.46□□□□□ -1.06
MSRB3-201ENST00000308259 C12orf74Q32Q52 190 aa8.46□□□□□ -1.06
MSRB3-201ENST00000308259 ZC2HC1BQ5TFG8 222 aa8.46□□□□□ -1.06
MSRB3-201ENST00000308259 IGFL3Q6UXB1 125 aa8.46□□□□□ -1.06
MSRB3-201ENST00000308259 GTSF1Q8WW33 167 aa8.46□□□□□ -1.06
MSRB3-201ENST00000308259 ZNF747Q9BV97 191 aa8.46□□□□□ -1.06
MSRB3-201ENST00000308259 SIGLEC8Q9NYZ4 499 aa8.46□□□□□ -1.06
MSRB3-201ENST00000308259 PYYP10082 97 aa8.45□□□□□ -1.06
MSRB3-201ENST00000308259 PMVKQ15126 192 aa8.45□□□□□ -1.06
MSRB3-201ENST00000308259 DDB2Q92466 427 aa8.45□□□□□ -1.06
MSRB3-201ENST00000308259 LEAP2Q969E1 77 aa8.45□□□□□ -1.06
MSRB3-201ENST00000308259 CACNA1BQ00975 2339 aa8.45□□□□□ -1.06
MSRB3-201ENST00000308259 DSCAML1Q8TD84 2053 aa8.45□□□□□ -1.06
MSRB3-201ENST00000308259 TCRBV4S1A1TA0A5B7 111 aa8.45□□□□□ -1.06
MSRB3-201ENST00000308259 C15orf53Q8NAA6 179 aa8.45□□□□□ -1.06
MSRB3-201ENST00000308259 OR13A1Q8NGR1 328 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms