RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 KLRD1Q13241 179 aa11.67□□□□□ -0.54
PTPN9-201ENST00000306726 BCL6BQ8N143 479 aaPredicted RBP11.67□□□□□ -0.54
PTPN9-201ENST00000306726 VSTM2AQ8TAG5 236 aa11.67□□□□□ -0.54
PTPN9-201ENST00000306726 VSTM5A8MXK1 200 aa11.66□□□□□ -0.54
PTPN9-201ENST00000306726 TGFAP01135 160 aa11.66□□□□□ -0.54
PTPN9-201ENST00000306726 TCRAP04437 139 aa11.66□□□□□ -0.54
PTPN9-201ENST00000306726 TIMM23BQ5SRD1 257 aa11.66□□□□□ -0.54
PTPN9-201ENST00000306726 FXYD5Q96DB9 178 aa11.66□□□□□ -0.54
PTPN9-201ENST00000306726 TMEM133Q9H2Q1 129 aa11.66□□□□□ -0.54
PTPN9-201ENST00000306726 ZNF785A8K8V0 405 aa11.66□□□□□ -0.54
PTPN9-201ENST00000306726 HLA-DMBP28068 263 aa11.66□□□□□ -0.54
PTPN9-201ENST00000306726 RBPMS2Q6ZRY4 209 aaKnown RBP11.66□□□□□ -0.54
PTPN9-201ENST00000306726 C11orf52Q96A22 123 aa11.66□□□□□ -0.54
PTPN9-201ENST00000306726 GPR183P32249 361 aa11.66□□□□□ -0.54
PTPN9-201ENST00000306726 CSN1S1P47710 185 aa11.66□□□□□ -0.54
PTPN9-201ENST00000306726 C2orf83Q53S99 150 aa11.66□□□□□ -0.54
PTPN9-201ENST00000306726 A0A1B0GUT8 65 aa11.65□□□□□ -0.54
PTPN9-201ENST00000306726 C16orf97H3BN30 126 aa11.65□□□□□ -0.54
PTPN9-201ENST00000306726 K7EQM0 130 aa11.65□□□□□ -0.54
PTPN9-201ENST00000306726 ECSCRQ19T08 205 aa11.65□□□□□ -0.54
PTPN9-201ENST00000306726 DDB2Q92466 427 aa11.65□□□□□ -0.54
PTPN9-201ENST00000306726 FAM215AQ9Y5M1 114 aa11.65□□□□□ -0.54
PTPN9-201ENST00000306726 SLC25A48Q6ZT89 311 aaKnown RBP11.65□□□□□ -0.54
PTPN9-201ENST00000306726 WFDC12Q8WWY7 111 aa11.65□□□□□ -0.54
PTPN9-201ENST00000306726 Q5PR19 223 aa11.65□□□□□ -0.54
PTPN9-201ENST00000306726 GAGE12BA1L429 117 aa11.64□□□□□ -0.55
PTPN9-201ENST00000306726 OSR1Q8TAX0 266 aaPredicted RBP11.64□□□□□ -0.55
PTPN9-201ENST00000306726 PRR30Q53SZ7 412 aaPredicted RBP11.64□□□□□ -0.55
PTPN9-201ENST00000306726 SEM1Q6ZVN7 128 aa11.64□□□□□ -0.55
PTPN9-201ENST00000306726 AAMDCQ9H7C9 122 aa11.64□□□□□ -0.55
PTPN9-201ENST00000306726 NDUFA4L2Q9NRX3 87 aa11.64□□□□□ -0.55
PTPN9-201ENST00000306726 IGF2BP2-AS1Q96M15 143 aa11.64□□□□□ -0.55
PTPN9-201ENST00000306726 ABCA2Q9BZC7 2435 aa11.64□□□□□ -0.55
PTPN9-201ENST00000306726 TMEM189A5PLL7 270 aa11.63□□□□□ -0.55
PTPN9-201ENST00000306726 COX19Q49B96 90 aa11.63□□□□□ -0.55
PTPN9-201ENST00000306726 ZNF788Q6ZQV5 615 aa11.63□□□□□ -0.55
PTPN9-201ENST00000306726 MRPL32Q9BYC8 188 aaKnown RBP11.63□□□□□ -0.55
PTPN9-201ENST00000306726 CST9LQ9H4G1 147 aa11.63□□□□□ -0.55
PTPN9-201ENST00000306726 TMEM160Q9NX00 188 aa11.63□□□□□ -0.55
PTPN9-201ENST00000306726 HSPB8Q9UJY1 196 aa11.63□□□□□ -0.55
PTPN9-201ENST00000306726 FAM231BA6NCW3 169 aa11.63□□□□□ -0.55
PTPN9-201ENST00000306726 C17orf100A8MU93 164 aa11.63□□□□□ -0.55
PTPN9-201ENST00000306726 LIPFP07098 398 aa11.63□□□□□ -0.55
PTPN9-201ENST00000306726 PAX1P15863 534 aa11.63□□□□□ -0.55
PTPN9-201ENST00000306726 RIGQ13278 110 aa11.63□□□□□ -0.55
PTPN9-201ENST00000306726 LYZL1Q6UWQ5 148 aa11.63□□□□□ -0.55
PTPN9-201ENST00000306726 PRELID3AQ96N28 172 aa11.63□□□□□ -0.55
PTPN9-201ENST00000306726 RELQ04864 619 aaPredicted RBP11.62□□□□□ -0.55
PTPN9-201ENST00000306726 C12orf54Q6X4T0 127 aa11.62□□□□□ -0.55
PTPN9-201ENST00000306726 K7ERJ3 54 aa11.62□□□□□ -0.55
PTPN9-201ENST00000306726 GATA1P15976 413 aaPredicted RBP11.62□□□□□ -0.55
PTPN9-201ENST00000306726 CTRLP40313 264 aa11.62□□□□□ -0.55
PTPN9-201ENST00000306726 IGHV1-69-2A0A0G2JMI3 117 aa11.62□□□□□ -0.55
PTPN9-201ENST00000306726 C2orf70A6NJV1 201 aa11.62□□□□□ -0.55
PTPN9-201ENST00000306726 J3QW42 95 aa11.62□□□□□ -0.55
PTPN9-201ENST00000306726 SLC25A39Q9BZJ4 359 aaPredicted RBP11.62□□□□□ -0.55
PTPN9-201ENST00000306726 MSRB1Q9NZV6 116 aa11.62□□□□□ -0.55
PTPN9-201ENST00000306726 TRAV9-1A0A075B6T8 112 aa11.61□□□□□ -0.55
PTPN9-201ENST00000306726 FAM120AOSQ5T036 256 aa11.61□□□□□ -0.55
PTPN9-201ENST00000306726 PCP2Q8IVA1 136 aa11.61□□□□□ -0.55
PTPN9-201ENST00000306726 OR10AG1Q8NH19 301 aa11.61□□□□□ -0.55
PTPN9-201ENST00000306726 LINC00312Q9Y6C7 94 aa11.61□□□□□ -0.55
PTPN9-201ENST00000306726 LOC105371242A0A075B767 164 aa11.61□□□□□ -0.55
PTPN9-201ENST00000306726 IGHV2-26A0A0B4J1V2 119 aa11.61□□□□□ -0.55
PTPN9-201ENST00000306726 IGLC7A0M8Q6 106 aa11.61□□□□□ -0.55
PTPN9-201ENST00000306726 C3orf36Q3SXR2 165 aa11.61□□□□□ -0.55
PTPN9-201ENST00000306726 FAM169BQ8N8A8 192 aa11.61□□□□□ -0.55
PTPN9-201ENST00000306726 CLEC3BP05452 202 aa11.61□□□□□ -0.55
PTPN9-201ENST00000306726 ANKRD39Q53RE8 183 aa11.61□□□□□ -0.55
PTPN9-201ENST00000306726 PPP1R27Q86WC6 154 aa11.61□□□□□ -0.55
PTPN9-201ENST00000306726 CACNG8Q8WXS5 425 aa11.61□□□□□ -0.55
PTPN9-201ENST00000306726 PSG8Q9UQ74 426 aa11.61□□□□□ -0.55
PTPN9-201ENST00000306726 BVES-AS1Q5T3Y7 98 aa11.61□□□□□ -0.55
PTPN9-201ENST00000306726 GTSCR1Q86UQ5 136 aa11.61□□□□□ -0.55
PTPN9-201ENST00000306726 ORAOV1Q8WV07 137 aa11.61□□□□□ -0.55
PTPN9-201ENST00000306726 TIMM23O14925 209 aa11.6□□□□□ -0.55
PTPN9-201ENST00000306726 ADIPOQQ15848 244 aa11.6□□□□□ -0.55
PTPN9-201ENST00000306726 CTSZQ9UBR2 303 aa11.6□□□□□ -0.55
PTPN9-201ENST00000306726 MYO18BQ8IUG5 2567 aa11.6□□□□□ -0.55
PTPN9-201ENST00000306726 PPIAL4CA0A0B4J2A2 164 aa11.6□□□□□ -0.55
PTPN9-201ENST00000306726 CCL21O00585 134 aa11.6□□□□□ -0.55
PTPN9-201ENST00000306726 PPIAL4GP0DN37 164 aa11.6□□□□□ -0.55
PTPN9-201ENST00000306726 ERCC8Q13216 396 aa11.6□□□□□ -0.55
PTPN9-201ENST00000306726 MBD6Q96DN6 1003 aa11.6□□□□□ -0.55
PTPN9-201ENST00000306726 GAGE1Q13065 139 aa11.59□□□□□ -0.55
PTPN9-201ENST00000306726 FBXL19-AS1Q494R0 122 aa11.59□□□□□ -0.55
PTPN9-201ENST00000306726 OCIAD2Q56VL3 154 aa11.59□□□□□ -0.55
PTPN9-201ENST00000306726 ZNF414Q96IQ9 312 aa11.59□□□□□ -0.55
PTPN9-201ENST00000306726 NHP2Q9NX24 153 aaKnown RBP11.59□□□□□ -0.55
PTPN9-201ENST00000306726 K7ERU9 68 aa11.59□□□□□ -0.55
PTPN9-201ENST00000306726 PLP1P60201 277 aa11.59□□□□□ -0.55
PTPN9-201ENST00000306726 STXBP6Q8NFX7 210 aa11.59□□□□□ -0.55
PTPN9-201ENST00000306726 TMEM97Q5BJF2 176 aa11.59□□□□□ -0.55
PTPN9-201ENST00000306726 RNF182Q8N6D2 247 aa11.59□□□□□ -0.55
PTPN9-201ENST00000306726 C1RLQ9NZP8 487 aa11.59□□□□□ -0.55
PTPN9-201ENST00000306726 JKAMPQ9P055 326 aa11.59□□□□□ -0.55
PTPN9-201ENST00000306726 DKK2Q9UBU2 259 aa11.59□□□□□ -0.55
PTPN9-201ENST00000306726 IGKV1D-37A0A075B6S9 117 aa11.58□□□□□ -0.56
PTPN9-201ENST00000306726 A0A0G2JNJ9 132 aa11.58□□□□□ -0.56
PTPN9-201ENST00000306726 GLMPQ8WWB7 406 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms