RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 GPHA2Q96T91 129 aa6.83□□□□□ -1.32
PCDHB1-201ENST00000306549 A8MWV9 139 aa6.82□□□□□ -1.32
PCDHB1-201ENST00000306549 RCC1LQ96I51 464 aaKnown RBP6.82□□□□□ -1.32
PCDHB1-201ENST00000306549 PSG8Q9UQ74 426 aa6.82□□□□□ -1.32
PCDHB1-201ENST00000306549 SETD2Q9BYW2 2564 aaPredicted RBP6.82□□□□□ -1.32
PCDHB1-201ENST00000306549 IGHV2-70DA0A0C4DH43 119 aa6.82□□□□□ -1.32
PCDHB1-201ENST00000306549 C17orf98A8MV24 154 aa6.82□□□□□ -1.32
PCDHB1-201ENST00000306549 H3BUX3 64 aa6.82□□□□□ -1.32
PCDHB1-201ENST00000306549 CCL3L1P16619 93 aa6.82□□□□□ -1.32
PCDHB1-201ENST00000306549 UBE2WQ96B02 151 aa6.82□□□□□ -1.32
PCDHB1-201ENST00000306549 PRORYQ9H606 182 aa6.82□□□□□ -1.32
PCDHB1-201ENST00000306549 F5H768 121 aa6.82□□□□□ -1.32
PCDHB1-201ENST00000306549 ZNF876PQ49A33 203 aa6.82□□□□□ -1.32
PCDHB1-201ENST00000306549 IGKCP01834 107 aa6.82□□□□□ -1.32
PCDHB1-201ENST00000306549 DEFB113Q30KQ7 82 aa6.82□□□□□ -1.32
PCDHB1-201ENST00000306549 GAGE2EQ4V326 116 aa6.82□□□□□ -1.32
PCDHB1-201ENST00000306549 GAGE2DQ9UEU5 116 aa6.82□□□□□ -1.32
PCDHB1-201ENST00000306549 EPDR1Q9UM22 224 aa6.82□□□□□ -1.32
PCDHB1-201ENST00000306549 DDTP30046 118 aa6.82□□□□□ -1.32
PCDHB1-201ENST00000306549 IGLV3-9A0A075B6K5 115 aa6.82□□□□□ -1.32
PCDHB1-201ENST00000306549 VCYO14598 125 aa6.82□□□□□ -1.32
PCDHB1-201ENST00000306549 REG4Q9BYZ8 158 aa6.82□□□□□ -1.32
PCDHB1-201ENST00000306549 MYMXA0A1B0GTQ4 84 aa6.81□□□□□ -1.32
PCDHB1-201ENST00000306549 TEX48A0A1B0GUV7 120 aa6.81□□□□□ -1.32
PCDHB1-201ENST00000306549 SCO2A0A1W2PP80 73 aa6.81□□□□□ -1.32
PCDHB1-201ENST00000306549 LMO1P25800 156 aa6.81□□□□□ -1.32
PCDHB1-201ENST00000306549 C8orf31Q8N9H6 132 aa6.81□□□□□ -1.32
PCDHB1-201ENST00000306549 Q96MF0 132 aa6.81□□□□□ -1.32
PCDHB1-201ENST00000306549 EFNA2O43921 213 aa6.81□□□□□ -1.32
PCDHB1-201ENST00000306549 CFPP27918 469 aa6.81□□□□□ -1.32
PCDHB1-201ENST00000306549 TEX36Q5VZQ5 186 aa6.81□□□□□ -1.32
PCDHB1-201ENST00000306549 SPATA31B1PQ5VZV4 182 aa6.81□□□□□ -1.32
PCDHB1-201ENST00000306549 A0A0U1RRA0 63 aa6.81□□□□□ -1.32
PCDHB1-201ENST00000306549 INAFM2P0DMQ5 153 aa6.81□□□□□ -1.32
PCDHB1-201ENST00000306549 GFI1BQ5VTD9 330 aa6.81□□□□□ -1.32
PCDHB1-201ENST00000306549 ATP5L2Q7Z4Y8 100 aa6.81□□□□□ -1.32
PCDHB1-201ENST00000306549 MBNL3Q9NUK0 354 aaKnown RBP6.81□□□□□ -1.32
PCDHB1-201ENST00000306549 FOXL1Q12952 345 aa6.81□□□□□ -1.32
PCDHB1-201ENST00000306549 CT83Q5H943 113 aa6.81□□□□□ -1.32
PCDHB1-201ENST00000306549 PNRC2Q9NPJ4 139 aaKnown RBP6.81□□□□□ -1.32
PCDHB1-201ENST00000306549 PRRC2AP48634 2157 aaKnown RBP6.81□□□□□ -1.32
PCDHB1-201ENST00000306549 IGHV1-3A0A0C4DH29 117 aa6.81□□□□□ -1.32
PCDHB1-201ENST00000306549 SRRM4A7MD48 611 aaKnown RBP6.81□□□□□ -1.32
PCDHB1-201ENST00000306549 SLC17A3O00476 420 aa6.81□□□□□ -1.32
PCDHB1-201ENST00000306549 C1QCP02747 245 aa6.81□□□□□ -1.32
PCDHB1-201ENST00000306549 MIR17HGQ75NE6 70 aa6.81□□□□□ -1.32
PCDHB1-201ENST00000306549 H3BUA1 57 aa6.81□□□□□ -1.32
PCDHB1-201ENST00000306549 LINC00311Q8N616 119 aa6.81□□□□□ -1.32
PCDHB1-201ENST00000306549 GGTLC1Q9BX51 225 aa6.81□□□□□ -1.32
PCDHB1-201ENST00000306549 IGHV1-69DA0A0B4J2H0 117 aa6.8□□□□□ -1.32
PCDHB1-201ENST00000306549 A0A1W2PRE2 83 aa6.8□□□□□ -1.32
PCDHB1-201ENST00000306549 PLA2G10O15496 165 aa6.8□□□□□ -1.32
PCDHB1-201ENST00000306549 IGHV1-69P01742 117 aa6.8□□□□□ -1.32
PCDHB1-201ENST00000306549 IGHV2-70P01814 119 aa6.8□□□□□ -1.32
PCDHB1-201ENST00000306549 DEFB130BP0DP73 79 aa6.8□□□□□ -1.32
PCDHB1-201ENST00000306549 DEFB130AP0DP74 79 aa6.8□□□□□ -1.32
PCDHB1-201ENST00000306549 CCL20P78556 96 aa6.8□□□□□ -1.32
PCDHB1-201ENST00000306549 C1orf159Q96HA4 380 aa6.8□□□□□ -1.32
PCDHB1-201ENST00000306549 ZNF48Q96MX3 618 aaPredicted RBP6.8□□□□□ -1.32
PCDHB1-201ENST00000306549 FGF16O43320 207 aa6.8□□□□□ -1.32
PCDHB1-201ENST00000306549 SAA4P35542 130 aa6.8□□□□□ -1.32
PCDHB1-201ENST00000306549 ZNF138P52744 262 aa6.8□□□□□ -1.32
PCDHB1-201ENST00000306549 TFF3Q07654 80 aa6.8□□□□□ -1.32
PCDHB1-201ENST00000306549 CHAC1Q9BUX1 264 aa6.8□□□□□ -1.32
PCDHB1-201ENST00000306549 NHP2Q9NX24 153 aaKnown RBP6.8□□□□□ -1.32
PCDHB1-201ENST00000306549 ZNF525Q8N782 197 aa6.8□□□□□ -1.32
PCDHB1-201ENST00000306549 THAP8Q8NA92 274 aa6.8□□□□□ -1.32
PCDHB1-201ENST00000306549 CHCHD1Q96BP2 118 aaKnown RBP6.8□□□□□ -1.32
PCDHB1-201ENST00000306549 PRDM13Q9H4Q3 707 aa6.8□□□□□ -1.32
PCDHB1-201ENST00000306549 RHODO00212 210 aa6.8□□□□□ -1.32
PCDHB1-201ENST00000306549 TMEM219Q86XT9 240 aa6.8□□□□□ -1.32
PCDHB1-201ENST00000306549 PUSL1Q8N0Z8 303 aaKnown RBP6.8□□□□□ -1.32
PCDHB1-201ENST00000306549 DMRTA1Q5VZB9 504 aa6.79□□□□□ -1.32
PCDHB1-201ENST00000306549 CLDN16Q9Y5I7 305 aa6.79□□□□□ -1.32
PCDHB1-201ENST00000306549 NDUFB8O95169 186 aa6.79□□□□□ -1.32
PCDHB1-201ENST00000306549 CD24P25063 80 aa6.79□□□□□ -1.32
PCDHB1-201ENST00000306549 HGFACQ04756 655 aa6.79□□□□□ -1.32
PCDHB1-201ENST00000306549 C1QL2Q7Z5L3 287 aa6.79□□□□□ -1.32
PCDHB1-201ENST00000306549 TRGV9Q99603 122 aa6.79□□□□□ -1.32
PCDHB1-201ENST00000306549 IGHV3-53P01767 116 aa6.79□□□□□ -1.32
PCDHB1-201ENST00000306549 CXCL2P19875 107 aa6.79□□□□□ -1.32
PCDHB1-201ENST00000306549 DERL1Q9BUN8 251 aa6.79□□□□□ -1.32
PCDHB1-201ENST00000306549 LY6G6FQ5SQ64 297 aa6.79□□□□□ -1.32
PCDHB1-201ENST00000306549 CTAG1AP78358 180 aa6.79□□□□□ -1.32
PCDHB1-201ENST00000306549 LYPD1Q8N2G4 141 aa6.79□□□□□ -1.32
PCDHB1-201ENST00000306549 AGRNO00468 2067 aa6.79□□□□□ -1.32
PCDHB1-201ENST00000306549 RIPPLY3P57055 190 aa6.79□□□□□ -1.32
PCDHB1-201ENST00000306549 C21orf62-AS1Q17RA5 79 aa6.79□□□□□ -1.32
PCDHB1-201ENST00000306549 PRSS57Q6UWY2 283 aa6.79□□□□□ -1.32
PCDHB1-201ENST00000306549 LYZL4Q96KX0 146 aa6.79□□□□□ -1.32
PCDHB1-201ENST00000306549 OSTCQ9NRP0 149 aa6.79□□□□□ -1.32
PCDHB1-201ENST00000306549 IGHV3-64A0A075B6Q5 118 aa6.79□□□□□ -1.32
PCDHB1-201ENST00000306549 RNF223E7ERA6 249 aa6.79□□□□□ -1.32
PCDHB1-201ENST00000306549 CD5LO43866 347 aa6.79□□□□□ -1.32
PCDHB1-201ENST00000306549 C14orf144Q96I85 54 aa6.79□□□□□ -1.32
PCDHB1-201ENST00000306549 UBE2E2Q96LR5 201 aa6.79□□□□□ -1.32
PCDHB1-201ENST00000306549 FAM215AQ9Y5M1 114 aa6.79□□□□□ -1.32
PCDHB1-201ENST00000306549 ANAPC13Q9BS18 74 aa6.78□□□□□ -1.32
PCDHB1-201ENST00000306549 TRBV25-1A0A075B6N4 114 aa6.78□□□□□ -1.32
PCDHB1-201ENST00000306549 IGHV3-73A0A0B4J1V6 119 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms