RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 GNLYP22749 145 aa11.3□□□□□ -0.6
PRKCB-201ENST00000303531 ZNF124Q15973 351 aa11.3□□□□□ -0.6
PRKCB-201ENST00000303531 MPV17L2Q567V2 206 aa11.3□□□□□ -0.6
PRKCB-201ENST00000303531 A0A1W2PPI3 338 aa11.3□□□□□ -0.6
PRKCB-201ENST00000303531 GHRHP01286 108 aa11.3□□□□□ -0.6
PRKCB-201ENST00000303531 ZNF415Q09FC8 603 aa11.3□□□□□ -0.6
PRKCB-201ENST00000303531 TMEM86BQ8N661 226 aa11.3□□□□□ -0.6
PRKCB-201ENST00000303531 CSTL1Q9H114 145 aa11.3□□□□□ -0.6
PRKCB-201ENST00000303531 C11orf68Q9H3H3 251 aaKnown RBP11.3□□□□□ -0.6
PRKCB-201ENST00000303531 FNDC1Q4ZHG4 1894 aaPredicted RBP11.3□□□□□ -0.6
PRKCB-201ENST00000303531 MCRIP2Q9BUT9 160 aaKnown RBP11.3□□□□□ -0.6
PRKCB-201ENST00000303531 THSD7BQ9C0I4 1608 aa11.3□□□□□ -0.6
PRKCB-201ENST00000303531 VCYO14598 125 aa11.29□□□□□ -0.6
PRKCB-201ENST00000303531 RLFQ13129 1914 aa11.29□□□□□ -0.6
PRKCB-201ENST00000303531 ZNF407Q9C0G0 2248 aa11.29□□□□□ -0.6
PRKCB-201ENST00000303531 ZNF664Q8N3J9 261 aa11.29□□□□□ -0.6
PRKCB-201ENST00000303531 TRGV1A0A0A0MS02 117 aa11.29□□□□□ -0.6
PRKCB-201ENST00000303531 GGTLC3B5MD39 225 aa11.29□□□□□ -0.6
PRKCB-201ENST00000303531 ATXN8Q156A1 80 aa11.29□□□□□ -0.6
PRKCB-201ENST00000303531 TEX43Q6ZNM6 134 aa11.29□□□□□ -0.6
PRKCB-201ENST00000303531 WISP1O95388 367 aa11.29□□□□□ -0.6
PRKCB-201ENST00000303531 ERCC8Q13216 396 aa11.29□□□□□ -0.6
PRKCB-201ENST00000303531 PRADC1Q9BSG0 188 aa11.29□□□□□ -0.6
PRKCB-201ENST00000303531 SHANK2-AS3Q9BTD1 123 aa11.29□□□□□ -0.6
PRKCB-201ENST00000303531 USMG5Q96IX5 58 aa11.29□□□□□ -0.6
PRKCB-201ENST00000303531 ARFGEF3Q5TH69 2177 aa11.28□□□□□ -0.6
PRKCB-201ENST00000303531 DLEU1O43261 78 aa11.28□□□□□ -0.6
PRKCB-201ENST00000303531 FAM223BA6NKX1 122 aa11.28□□□□□ -0.6
PRKCB-201ENST00000303531 FAM223AQ8IWN6 122 aa11.28□□□□□ -0.6
PRKCB-201ENST00000303531 PLEKHB2Q96CS7 222 aa11.28□□□□□ -0.6
PRKCB-201ENST00000303531 ANAPC13Q9BS18 74 aa11.28□□□□□ -0.6
PRKCB-201ENST00000303531 E7EQL1 145 aa11.28□□□□□ -0.6
PRKCB-201ENST00000303531 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.28□□□□□ -0.6
PRKCB-201ENST00000303531 PIP4P2Q8N4L2 257 aa11.28□□□□□ -0.6
PRKCB-201ENST00000303531 RHPN1-AS1Q9BWJ2 59 aa11.28□□□□□ -0.6
PRKCB-201ENST00000303531 ITGB1BP1O14713 200 aa11.28□□□□□ -0.6
PRKCB-201ENST00000303531 IGHV3-53P01767 116 aa11.28□□□□□ -0.6
PRKCB-201ENST00000303531 SAA4P35542 130 aa11.28□□□□□ -0.6
PRKCB-201ENST00000303531 RPL36AP83881 106 aaKnown RBP11.28□□□□□ -0.6
PRKCB-201ENST00000303531 RPL36ALQ969Q0 106 aaKnown RBP11.28□□□□□ -0.6
PRKCB-201ENST00000303531 DTX2Q86UW9 622 aa11.27□□□□□ -0.61
PRKCB-201ENST00000303531 C1orf147Q96MC9 270 aaPredicted RBP11.27□□□□□ -0.61
PRKCB-201ENST00000303531 BPESC1Q9GZL8 116 aa11.27□□□□□ -0.61
PRKCB-201ENST00000303531 ZC2HC1BQ5TFG8 222 aa11.27□□□□□ -0.61
PRKCB-201ENST00000303531 GFRA4Q9GZZ7 299 aa11.27□□□□□ -0.61
PRKCB-201ENST00000303531 CKS1BP61024 79 aa11.27□□□□□ -0.61
PRKCB-201ENST00000303531 S100A7L2Q5SY68 101 aa11.27□□□□□ -0.61
PRKCB-201ENST00000303531 RSPO3Q9BXY4 272 aaPredicted RBP11.27□□□□□ -0.61
PRKCB-201ENST00000303531 TMEM14BQ9NUH8 114 aa11.27□□□□□ -0.61
PRKCB-201ENST00000303531 ETV2O00321 342 aaPredicted RBP11.27□□□□□ -0.61
PRKCB-201ENST00000303531 ANAPC10Q9UM13 185 aa11.27□□□□□ -0.61
PRKCB-201ENST00000303531 A0A087WWL8 130 aa11.26□□□□□ -0.61
PRKCB-201ENST00000303531 ARMS2P0C7Q2 107 aa11.26□□□□□ -0.61
PRKCB-201ENST00000303531 SRSF8Q9BRL6 282 aaKnown RBP11.26□□□□□ -0.61
PRKCB-201ENST00000303531 CMC4P56277 68 aaPredicted RBP11.26□□□□□ -0.61
PRKCB-201ENST00000303531 Q5PR19 223 aa11.26□□□□□ -0.61
PRKCB-201ENST00000303531 PRTN3P24158 256 aa11.26□□□□□ -0.61
PRKCB-201ENST00000303531 A0A087WX48 190 aa11.26□□□□□ -0.61
PRKCB-201ENST00000303531 LMO1P25800 156 aa11.26□□□□□ -0.61
PRKCB-201ENST00000303531 PAX9P55771 341 aa11.26□□□□□ -0.61
PRKCB-201ENST00000303531 PDE6HQ13956 83 aa11.26□□□□□ -0.61
PRKCB-201ENST00000303531 TMEM155Q4W5P6 130 aa11.25□□□□□ -0.61
PRKCB-201ENST00000303531 RPL35AP18077 110 aaKnown RBP11.25□□□□□ -0.61
PRKCB-201ENST00000303531 TDGF1P3P51864 188 aa11.25□□□□□ -0.61
PRKCB-201ENST00000303531 GATD1Q8NB37 220 aa11.25□□□□□ -0.61
PRKCB-201ENST00000303531 KIR3DS1Q14943 382 aa11.25□□□□□ -0.61
PRKCB-201ENST00000303531 A0A1B0GUS0 222 aa11.25□□□□□ -0.61
PRKCB-201ENST00000303531 OVOL3O00110 214 aa11.25□□□□□ -0.61
PRKCB-201ENST00000303531 ZNF524Q96C55 264 aa11.25□□□□□ -0.61
PRKCB-201ENST00000303531 PAX4O43316 350 aa11.24□□□□□ -0.61
PRKCB-201ENST00000303531 CYYR1Q96J86 154 aa11.24□□□□□ -0.61
PRKCB-201ENST00000303531 LIME1Q9H400 295 aa11.24□□□□□ -0.61
PRKCB-201ENST00000303531 VGLL1Q99990 258 aa11.24□□□□□ -0.61
PRKCB-201ENST00000303531 SPOCK3Q9BQ16 436 aa11.24□□□□□ -0.61
PRKCB-201ENST00000303531 DAZ1Q9NQZ3 744 aaKnown RBP11.24□□□□□ -0.61
PRKCB-201ENST00000303531 PROK2Q9HC23 129 aa11.24□□□□□ -0.61
PRKCB-201ENST00000303531 NDUFA4L2Q9NRX3 87 aa11.24□□□□□ -0.61
PRKCB-201ENST00000303531 C1orf159Q96HA4 380 aa11.24□□□□□ -0.61
PRKCB-201ENST00000303531 WDR81Q562E7 1941 aa11.24□□□□□ -0.61
PRKCB-201ENST00000303531 Q0VG73 95 aa11.24□□□□□ -0.61
PRKCB-201ENST00000303531 LCNL1Q6ZST4 164 aa11.24□□□□□ -0.61
PRKCB-201ENST00000303531 TMEM75Q8N9X5 138 aa11.24□□□□□ -0.61
PRKCB-201ENST00000303531 RASL10AQ92737 203 aa11.24□□□□□ -0.61
PRKCB-201ENST00000303531 UBE2E2Q96LR5 201 aa11.24□□□□□ -0.61
PRKCB-201ENST00000303531 TNFRSF6BO95407 300 aa11.24□□□□□ -0.61
PRKCB-201ENST00000303531 Q6ZR03 302 aa11.24□□□□□ -0.61
PRKCB-201ENST00000303531 KLHL30-AS1Q8NEE0 82 aa11.24□□□□□ -0.61
PRKCB-201ENST00000303531 NDUFS6O75380 124 aaKnown RBP11.23□□□□□ -0.61
PRKCB-201ENST00000303531 PHLDA1Q8WV24 401 aaPredicted RBP11.23□□□□□ -0.61
PRKCB-201ENST00000303531 TMEM213A2RRL7 107 aa11.23□□□□□ -0.61
PRKCB-201ENST00000303531 ZNF562Q6V9R5 426 aa11.23□□□□□ -0.61
PRKCB-201ENST00000303531 CST9LQ9H4G1 147 aa11.23□□□□□ -0.61
PRKCB-201ENST00000303531 INSP01308 110 aa11.23□□□□□ -0.61
PRKCB-201ENST00000303531 HEATR5AQ86XA9 2040 aa11.23□□□□□ -0.61
PRKCB-201ENST00000303531 E9PQ18 207 aa11.23□□□□□ -0.61
PRKCB-201ENST00000303531 PFN1P07737 140 aaKnown RBP11.23□□□□□ -0.61
PRKCB-201ENST00000303531 WDR86Q86TI4 376 aa11.23□□□□□ -0.61
PRKCB-201ENST00000303531 C8orf49Q96NF6 230 aa11.23□□□□□ -0.61
PRKCB-201ENST00000303531 JPT2Q9H910 190 aa11.23□□□□□ -0.61
PRKCB-201ENST00000303531 ZNF726P1Q15940 193 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 436.4 ms