RNA–Protein interactions for RNA: ENST00000300305.7

RUNX1-201, Transcript of runt related transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUNX1, Length 6,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-201ENST00000300305 SPOCK3Q9BQ16 436 aa13.21□□□□□ -0.29
RUNX1-201ENST00000300305 ANAPC10Q9UM13 185 aa13.21□□□□□ -0.29
RUNX1-201ENST00000300305 TRAV12-1A0A0B4J245 112 aa13.21□□□□□ -0.3
RUNX1-201ENST00000300305 NDUFS8O00217 210 aa13.21□□□□□ -0.3
RUNX1-201ENST00000300305 PRB2P02812 416 aaPredicted RBP13.21□□□□□ -0.3
RUNX1-201ENST00000300305 SPSB3Q6PJ21 355 aa13.21□□□□□ -0.3
RUNX1-201ENST00000300305 DUX4L9Q6RFH8 374 aaPredicted RBP13.21□□□□□ -0.3
RUNX1-201ENST00000300305 RASL10AQ92737 203 aa13.21□□□□□ -0.3
RUNX1-201ENST00000300305 MRAPQ8TCY5 172 aa13.2□□□□□ -0.3
RUNX1-201ENST00000300305 AKAP6Q13023 2319 aa13.2□□□□□ -0.3
RUNX1-201ENST00000300305 MPZP25189 248 aa13.2□□□□□ -0.3
RUNX1-201ENST00000300305 GAS1P54826 345 aa13.2□□□□□ -0.3
RUNX1-201ENST00000300305 COL4A6Q14031 1691 aa13.2□□□□□ -0.3
RUNX1-201ENST00000300305 F8WEM9 126 aa13.2□□□□□ -0.3
RUNX1-201ENST00000300305 SEC11AP67812 179 aa13.2□□□□□ -0.3
RUNX1-201ENST00000300305 PYY3Q5JQD4 70 aa13.2□□□□□ -0.3
RUNX1-201ENST00000300305 CHAC1Q9BUX1 264 aa13.2□□□□□ -0.3
RUNX1-201ENST00000300305 PNRC2Q9NPJ4 139 aaKnown RBP13.2□□□□□ -0.3
RUNX1-201ENST00000300305 FREM3P0C091 2139 aa13.2□□□□□ -0.3
RUNX1-201ENST00000300305 IGLV3-32A0A0A0MS00 114 aa13.2□□□□□ -0.3
RUNX1-201ENST00000300305 SRRM5B3KS81 715 aa13.2□□□□□ -0.3
RUNX1-201ENST00000300305 ZNF664Q8N3J9 261 aa13.2□□□□□ -0.3
RUNX1-201ENST00000300305 MED12Q93074 2177 aa13.2□□□□□ -0.3
RUNX1-201ENST00000300305 SAA4P35542 130 aa13.19□□□□□ -0.3
RUNX1-201ENST00000300305 TRAV25A0A0B4J276 109 aa13.19□□□□□ -0.3
RUNX1-201ENST00000300305 WDR90Q96KV7 1748 aa13.19□□□□□ -0.3
RUNX1-201ENST00000300305 CLPSP04118 112 aa13.19□□□□□ -0.3
RUNX1-201ENST00000300305 SPINK8P0C7L1 97 aa13.19□□□□□ -0.3
RUNX1-201ENST00000300305 GATA4P43694 442 aa13.19□□□□□ -0.3
RUNX1-201ENST00000300305 C5orf64Q2M2E5 130 aa13.19□□□□□ -0.3
RUNX1-201ENST00000300305 MORN5Q5VZ52 161 aa13.19□□□□□ -0.3
RUNX1-201ENST00000300305 Q6ZRM9 215 aa13.19□□□□□ -0.3
RUNX1-201ENST00000300305 EREGO14944 169 aa13.19□□□□□ -0.3
RUNX1-201ENST00000300305 CYYR1Q96J86 154 aa13.19□□□□□ -0.3
RUNX1-201ENST00000300305 SIGLEC9Q9Y336 463 aa13.19□□□□□ -0.3
RUNX1-201ENST00000300305 SPTA1P02549 2419 aa13.18□□□□□ -0.3
RUNX1-201ENST00000300305 EFNA4P52798 201 aa13.18□□□□□ -0.3
RUNX1-201ENST00000300305 FANCMQ8IYD8 2048 aa13.18□□□□□ -0.3
RUNX1-201ENST00000300305 F5H768 121 aa13.18□□□□□ -0.3
RUNX1-201ENST00000300305 VCYO14598 125 aa13.18□□□□□ -0.3
RUNX1-201ENST00000300305 CACNA1EQ15878 2313 aa13.18□□□□□ -0.3
RUNX1-201ENST00000300305 C15orf62A8K5M9 175 aa13.18□□□□□ -0.3
RUNX1-201ENST00000300305 FAM166AQ6J272 317 aa13.18□□□□□ -0.3
RUNX1-201ENST00000300305 DLX4Q92988 240 aaPredicted RBP13.18□□□□□ -0.3
RUNX1-201ENST00000300305 RPRMLQ8N4K4 120 aa13.18□□□□□ -0.3
RUNX1-201ENST00000300305 REG4Q9BYZ8 158 aa13.18□□□□□ -0.3
RUNX1-201ENST00000300305 POLEQ07864 2286 aa13.18□□□□□ -0.3
RUNX1-201ENST00000300305 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.18□□□□□ -0.3
RUNX1-201ENST00000300305 TP53TG1Q9Y2A0 90 aa13.18□□□□□ -0.3
RUNX1-201ENST00000300305 DLEU1O43261 78 aa13.17□□□□□ -0.3
RUNX1-201ENST00000300305 C1orf194Q5T5A4 169 aa13.17□□□□□ -0.3
RUNX1-201ENST00000300305 LTBP1Q14766 1721 aa13.17□□□□□ -0.3
RUNX1-201ENST00000300305 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.17□□□□□ -0.3
RUNX1-201ENST00000300305 NMSQ5H8A3 153 aa13.17□□□□□ -0.3
RUNX1-201ENST00000300305 Q6P435 159 aa13.17□□□□□ -0.3
RUNX1-201ENST00000300305 PLEKHB2Q96CS7 222 aa13.17□□□□□ -0.3
RUNX1-201ENST00000300305 G3V318 75 aa13.17□□□□□ -0.3
RUNX1-201ENST00000300305 ANXA2RQ3ZCQ2 193 aa13.17□□□□□ -0.3
RUNX1-201ENST00000300305 TRGV9Q99603 122 aa13.17□□□□□ -0.3
RUNX1-201ENST00000300305 TRBV7-1A0A0A6YYK4 115 aa13.17□□□□□ -0.3
RUNX1-201ENST00000300305 ADCYAP1P18509 176 aa13.17□□□□□ -0.3
RUNX1-201ENST00000300305 PAX9P55771 341 aa13.17□□□□□ -0.3
RUNX1-201ENST00000300305 PMVKQ15126 192 aa13.17□□□□□ -0.3
RUNX1-201ENST00000300305 PLSCR4Q9NRQ2 329 aa13.17□□□□□ -0.3
RUNX1-201ENST00000300305 TMEM242Q9NWH2 141 aa13.17□□□□□ -0.3
RUNX1-201ENST00000300305 DOCK6Q96HP0 2047 aa13.16□□□□□ -0.3
RUNX1-201ENST00000300305 SPRY2O43597 315 aa13.16□□□□□ -0.3
RUNX1-201ENST00000300305 DIDO1Q9BTC0 2240 aaKnown RBP13.16□□□□□ -0.3
RUNX1-201ENST00000300305 ZDBF2Q9HCK1 2354 aa13.16□□□□□ -0.3
RUNX1-201ENST00000300305 WIPF3A6NGB9 483 aa13.16□□□□□ -0.3
RUNX1-201ENST00000300305 FAM110DQ8TAY7 271 aaPredicted RBP13.16□□□□□ -0.3
RUNX1-201ENST00000300305 MBD3L4A6NDZ8 208 aaPredicted RBP13.16□□□□□ -0.3
RUNX1-201ENST00000300305 MBD3L3A6NE82 208 aaPredicted RBP13.16□□□□□ -0.3
RUNX1-201ENST00000300305 MBD3L5A6NJ08 208 aaPredicted RBP13.16□□□□□ -0.3
RUNX1-201ENST00000300305 GAGE6Q13070 117 aa13.16□□□□□ -0.3
RUNX1-201ENST00000300305 RASL11AQ6T310 242 aa13.16□□□□□ -0.3
RUNX1-201ENST00000300305 MBD3L2Q8NHZ7 208 aaPredicted RBP13.16□□□□□ -0.3
RUNX1-201ENST00000300305 CGB3P0DN86 165 aa13.16□□□□□ -0.3
RUNX1-201ENST00000300305 ATP6V0BQ99437 205 aa13.16□□□□□ -0.3
RUNX1-201ENST00000300305 LHFPL1Q86WI0 220 aa13.15□□□□□ -0.3
RUNX1-201ENST00000300305 GAGE12BA1L429 117 aa13.15□□□□□ -0.3
RUNX1-201ENST00000300305 CSRP1P21291 193 aaKnown RBP13.15□□□□□ -0.3
RUNX1-201ENST00000300305 SS18Q15532 418 aa13.15□□□□□ -0.3
RUNX1-201ENST00000300305 LIME1Q9H400 295 aa13.15□□□□□ -0.3
RUNX1-201ENST00000300305 GAGE7O76087 117 aa13.15□□□□□ -0.3
RUNX1-201ENST00000300305 GAGE12FP0CL80 117 aa13.15□□□□□ -0.3
RUNX1-201ENST00000300305 GAGE12GP0CL81 117 aa13.15□□□□□ -0.3
RUNX1-201ENST00000300305 GAGE12IP0CL82 117 aa13.15□□□□□ -0.3
RUNX1-201ENST00000300305 PI4KAP42356 2102 aa13.15□□□□□ -0.3
RUNX1-201ENST00000300305 ATP6V0E1O15342 81 aa13.15□□□□□ -0.3
RUNX1-201ENST00000300305 HOXD3P31249 432 aaPredicted RBP13.15□□□□□ -0.3
RUNX1-201ENST00000300305 LRRK1Q38SD2 2015 aa13.15□□□□□ -0.3
RUNX1-201ENST00000300305 Q86TA4 180 aa13.15□□□□□ -0.31
RUNX1-201ENST00000300305 SRSF8Q9BRL6 282 aaKnown RBP13.15□□□□□ -0.31
RUNX1-201ENST00000300305 TRBV24-1A0A075B6N3 115 aa13.14□□□□□ -0.31
RUNX1-201ENST00000300305 KIAA2026Q5HYC2 2103 aa13.14□□□□□ -0.31
RUNX1-201ENST00000300305 FAM90A9PA6NNJ1 464 aa13.14□□□□□ -0.31
RUNX1-201ENST00000300305 SLC25A16P16260 332 aa13.14□□□□□ -0.31
RUNX1-201ENST00000300305 FAM231BA6NCW3 169 aa13.14□□□□□ -0.31
RUNX1-201ENST00000300305 RNASE2P10153 161 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 173.6 ms