RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 TSSC4Q9Y5U2 329 aaPredicted RBP10.75□□□□□ -0.69
CTDP1-202ENST00000299543 K7EMI3 77 aa10.74□□□□□ -0.69
CTDP1-202ENST00000299543 CHEK1O14757 476 aa10.74□□□□□ -0.69
CTDP1-202ENST00000299543 RALYQ9UKM9 306 aaKnown RBP10.74□□□□□ -0.69
CTDP1-202ENST00000299543 FAM90A27PA6NNH2 459 aa10.74□□□□□ -0.69
CTDP1-202ENST00000299543 MC5RP33032 325 aa10.74□□□□□ -0.69
CTDP1-202ENST00000299543 OR8A1Q8NGG7 326 aa10.74□□□□□ -0.69
CTDP1-202ENST00000299543 RPEQ96AT9 228 aa10.74□□□□□ -0.69
CTDP1-202ENST00000299543 TMEM133Q9H2Q1 129 aa10.74□□□□□ -0.69
CTDP1-202ENST00000299543 DCHS2Q6V1P9 2916 aa10.74□□□□□ -0.69
CTDP1-202ENST00000299543 A0A0G2JLM5 398 aa10.74□□□□□ -0.69
CTDP1-202ENST00000299543 K7EQM0 130 aa10.74□□□□□ -0.69
CTDP1-202ENST00000299543 MAP1LC3CQ9BXW4 147 aa10.74□□□□□ -0.69
CTDP1-202ENST00000299543 JKAMPQ9P055 326 aa10.74□□□□□ -0.69
CTDP1-202ENST00000299543 ONECUT1Q9UBC0 465 aa10.74□□□□□ -0.69
CTDP1-202ENST00000299543 NMUP48645 174 aa10.73□□□□□ -0.69
CTDP1-202ENST00000299543 TMEM97Q5BJF2 176 aa10.73□□□□□ -0.69
CTDP1-202ENST00000299543 SYS1-DBNDD2H3BUS1 97 aa10.73□□□□□ -0.69
CTDP1-202ENST00000299543 CRYBA4P53673 196 aa10.73□□□□□ -0.69
CTDP1-202ENST00000299543 TMEM155Q4W5P6 130 aa10.73□□□□□ -0.69
CTDP1-202ENST00000299543 EXOC3-AS1Q8N2X6 119 aa10.73□□□□□ -0.69
CTDP1-202ENST00000299543 NGBQ9NPG2 151 aa10.73□□□□□ -0.69
CTDP1-202ENST00000299543 FXYD7P58549 80 aa10.73□□□□□ -0.69
CTDP1-202ENST00000299543 FOXC1Q12948 553 aa10.73□□□□□ -0.69
CTDP1-202ENST00000299543 UFSP1Q6NVU6 142 aa10.73□□□□□ -0.69
CTDP1-202ENST00000299543 GRAMD2BQ96HH9 432 aa10.73□□□□□ -0.69
CTDP1-202ENST00000299543 ST20Q9HBF5 79 aa10.73□□□□□ -0.69
CTDP1-202ENST00000299543 BSNQ9UPA5 3926 aa10.72□□□□□ -0.69
CTDP1-202ENST00000299543 P01737 135 aa10.72□□□□□ -0.69
CTDP1-202ENST00000299543 LINC00322Q6ZN03 302 aaPredicted RBP10.72□□□□□ -0.69
CTDP1-202ENST00000299543 PRNTQ86SH4 94 aa10.72□□□□□ -0.69
CTDP1-202ENST00000299543 SRSF8Q9BRL6 282 aaKnown RBP10.72□□□□□ -0.69
CTDP1-202ENST00000299543 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.72□□□□□ -0.69
CTDP1-202ENST00000299543 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.72□□□□□ -0.69
CTDP1-202ENST00000299543 FAM120AOSQ5T036 256 aa10.72□□□□□ -0.69
CTDP1-202ENST00000299543 ATP6V0BQ99437 205 aa10.72□□□□□ -0.69
CTDP1-202ENST00000299543 Q9H3A6 140 aa10.72□□□□□ -0.69
CTDP1-202ENST00000299543 HES1Q14469 280 aa10.71□□□□□ -0.69
CTDP1-202ENST00000299543 COX19Q49B96 90 aa10.71□□□□□ -0.69
CTDP1-202ENST00000299543 KLF17Q5JT82 389 aaPredicted RBP10.71□□□□□ -0.69
CTDP1-202ENST00000299543 GOLT1AQ6ZVE7 132 aa10.71□□□□□ -0.69
CTDP1-202ENST00000299543 ASCL5Q7RTU5 278 aa10.71□□□□□ -0.69
CTDP1-202ENST00000299543 PPP1R27Q86WC6 154 aa10.71□□□□□ -0.69
CTDP1-202ENST00000299543 SIGLEC9Q9Y336 463 aa10.71□□□□□ -0.69
CTDP1-202ENST00000299543 MAP1AP78559 2803 aaPredicted RBP10.71□□□□□ -0.69
CTDP1-202ENST00000299543 OR5AL1P0C617 328 aa10.71□□□□□ -0.69
CTDP1-202ENST00000299543 GCSHP23434 173 aa10.71□□□□□ -0.69
CTDP1-202ENST00000299543 HIST1H1AQ02539 215 aaPredicted RBP10.71□□□□□ -0.69
CTDP1-202ENST00000299543 KIR3DS1Q14943 382 aa10.71□□□□□ -0.69
CTDP1-202ENST00000299543 C2orf91Q6ZV80 131 aa10.71□□□□□ -0.69
CTDP1-202ENST00000299543 CIARTQ8N365 385 aaPredicted RBP10.71□□□□□ -0.69
CTDP1-202ENST00000299543 GPR82Q96P67 336 aa10.71□□□□□ -0.69
CTDP1-202ENST00000299543 NCOR2Q9Y618 2525 aa10.71□□□□□ -0.7
CTDP1-202ENST00000299543 A6NDN8 102 aa10.71□□□□□ -0.7
CTDP1-202ENST00000299543 VWC2LB2RUY7 222 aa10.71□□□□□ -0.7
CTDP1-202ENST00000299543 CD3EP07766 207 aa10.71□□□□□ -0.7
CTDP1-202ENST00000299543 WFDC3Q8IUB2 231 aa10.71□□□□□ -0.7
CTDP1-202ENST00000299543 Q8NA96 180 aa10.71□□□□□ -0.7
CTDP1-202ENST00000299543 IGHV1-3A0A0C4DH29 117 aa10.7□□□□□ -0.7
CTDP1-202ENST00000299543 SHISA9B4DS77 424 aa10.7□□□□□ -0.7
CTDP1-202ENST00000299543 FABP2P12104 132 aa10.7□□□□□ -0.7
CTDP1-202ENST00000299543 COL8A1P27658 744 aa10.7□□□□□ -0.7
CTDP1-202ENST00000299543 RPS20P60866 119 aaKnown RBP10.7□□□□□ -0.7
CTDP1-202ENST00000299543 HSD52Q0P140 79 aa10.7□□□□□ -0.7
CTDP1-202ENST00000299543 Q71RC1 249 aaPredicted RBP10.7□□□□□ -0.7
CTDP1-202ENST00000299543 SCRT2Q9NQ03 307 aa10.7□□□□□ -0.7
CTDP1-202ENST00000299543 HIGD1AQ9Y241 93 aa10.7□□□□□ -0.7
CTDP1-202ENST00000299543 GRNP28799 593 aaKnown RBP10.7□□□□□ -0.7
CTDP1-202ENST00000299543 NEU4Q8WWR8 484 aaPredicted RBP10.7□□□□□ -0.7
CTDP1-202ENST00000299543 HLA-DRB1P01911 266 aa10.69□□□□□ -0.7
CTDP1-202ENST00000299543 FCER1GP30273 86 aa10.69□□□□□ -0.7
CTDP1-202ENST00000299543 THAP8Q8NA92 274 aa10.69□□□□□ -0.7
CTDP1-202ENST00000299543 SRSF12Q8WXF0 261 aaKnown RBP10.69□□□□□ -0.7
CTDP1-202ENST00000299543 RASL11BQ9BPW5 248 aa10.69□□□□□ -0.7
CTDP1-202ENST00000299543 LOC389332A0A1B0GUA5 103 aa10.69□□□□□ -0.7
CTDP1-202ENST00000299543 GATA3P23771 443 aa10.69□□□□□ -0.7
CTDP1-202ENST00000299543 NPFFR1Q9GZQ6 430 aa10.69□□□□□ -0.7
CTDP1-202ENST00000299543 SPTBN4Q9H254 2564 aa10.69□□□□□ -0.7
CTDP1-202ENST00000299543 IGHV1-24A0A0C4DH33 117 aa10.69□□□□□ -0.7
CTDP1-202ENST00000299543 APOBEC3AP31941 199 aaPredicted RBP10.69□□□□□ -0.7
CTDP1-202ENST00000299543 CHD8Q9HCK8 2581 aa10.68□□□□□ -0.7
CTDP1-202ENST00000299543 DLX6P56179 175 aa10.68□□□□□ -0.7
CTDP1-202ENST00000299543 TCF15Q12870 199 aa10.68□□□□□ -0.7
CTDP1-202ENST00000299543 IGF2-ASQ6U949 168 aa10.68□□□□□ -0.7
CTDP1-202ENST00000299543 LINC00311Q8N616 119 aa10.68□□□□□ -0.7
CTDP1-202ENST00000299543 C17orf77Q96MU5 243 aa10.68□□□□□ -0.7
CTDP1-202ENST00000299543 A8MWL6 223 aa10.68□□□□□ -0.7
CTDP1-202ENST00000299543 NCR2O95944 276 aa10.68□□□□□ -0.7
CTDP1-202ENST00000299543 MRGPRG-AS1Q2M3A8 158 aa10.68□□□□□ -0.7
CTDP1-202ENST00000299543 NEGR1Q7Z3B1 354 aa10.68□□□□□ -0.7
CTDP1-202ENST00000299543 RPP21Q9H633 154 aaKnown RBP10.68□□□□□ -0.7
CTDP1-202ENST00000299543 BUB1B-PAK6H3BSN5 160 aa10.68□□□□□ -0.7
CTDP1-202ENST00000299543 TCRAP04437 139 aa10.68□□□□□ -0.7
CTDP1-202ENST00000299543 SH2D6Q7Z4S9 175 aa10.68□□□□□ -0.7
CTDP1-202ENST00000299543 HSPB8Q9UJY1 196 aa10.68□□□□□ -0.7
CTDP1-202ENST00000299543 FSTL3O95633 263 aa10.67□□□□□ -0.7
CTDP1-202ENST00000299543 ATP5G2Q06055 141 aa10.67□□□□□ -0.7
CTDP1-202ENST00000299543 ETDBQ3ZM63 59 aa10.67□□□□□ -0.7
CTDP1-202ENST00000299543 CCDC144NLQ6NUI1 221 aa10.67□□□□□ -0.7
CTDP1-202ENST00000299543 C8orf46Q8TAG6 207 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms