RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 TMEM136Q6ZRR5 245 aa8.07□□□□□ -1.12
FOXN4-201ENST00000299162 OR4F17Q8NGA8 305 aa8.07□□□□□ -1.12
FOXN4-201ENST00000299162 TMEM167AQ8TBQ9 72 aa8.07□□□□□ -1.12
FOXN4-201ENST00000299162 RAB1CQ92928 201 aa8.07□□□□□ -1.12
FOXN4-201ENST00000299162 RAB1BQ9H0U4 201 aa8.07□□□□□ -1.12
FOXN4-201ENST00000299162 MRPL27Q9P0M9 148 aaKnown RBP8.07□□□□□ -1.12
FOXN4-201ENST00000299162 TRAV9-2A0A087WT02 112 aa8.07□□□□□ -1.12
FOXN4-201ENST00000299162 A0A1W2PPR1 153 aa8.07□□□□□ -1.12
FOXN4-201ENST00000299162 FAM181BA6NEQ2 426 aa8.07□□□□□ -1.12
FOXN4-201ENST00000299162 J3KRW8 73 aa8.07□□□□□ -1.12
FOXN4-201ENST00000299162 C8orf88P0DMB2 117 aa8.07□□□□□ -1.12
FOXN4-201ENST00000299162 GATA3P23771 443 aa8.07□□□□□ -1.12
FOXN4-201ENST00000299162 DLX6P56179 175 aa8.07□□□□□ -1.12
FOXN4-201ENST00000299162 TAS2R45P59539 299 aa8.07□□□□□ -1.12
FOXN4-201ENST00000299162 TM4SF20Q53R12 229 aa8.07□□□□□ -1.12
FOXN4-201ENST00000299162 PAXXQ9BUH6 204 aa8.07□□□□□ -1.12
FOXN4-201ENST00000299162 LINC00574Q9H8X3 128 aa8.07□□□□□ -1.12
FOXN4-201ENST00000299162 ABCA12Q86UK0 2595 aa8.06□□□□□ -1.12
FOXN4-201ENST00000299162 PPP1R27Q86WC6 154 aa8.06□□□□□ -1.12
FOXN4-201ENST00000299162 TIMD4Q96H15 378 aa8.06□□□□□ -1.12
FOXN4-201ENST00000299162 CHRDL1Q9BU40 450 aa8.06□□□□□ -1.12
FOXN4-201ENST00000299162 PGPEP1Q9NXJ5 209 aa8.06□□□□□ -1.12
FOXN4-201ENST00000299162 ZNF207O43670 478 aaKnown RBP8.06□□□□□ -1.12
FOXN4-201ENST00000299162 Q0VG73 95 aa8.06□□□□□ -1.12
FOXN4-201ENST00000299162 SPATA12Q7Z6I5 190 aa8.06□□□□□ -1.12
FOXN4-201ENST00000299162 C18orf32Q8TCD1 76 aa8.06□□□□□ -1.12
FOXN4-201ENST00000299162 SIGLEC9Q9Y336 463 aa8.06□□□□□ -1.12
FOXN4-201ENST00000299162 AMY1AP04745 511 aa8.05□□□□□ -1.12
FOXN4-201ENST00000299162 ESDP10768 282 aa8.05□□□□□ -1.12
FOXN4-201ENST00000299162 HERV-K104P63124 156 aa8.05□□□□□ -1.12
FOXN4-201ENST00000299162 FAM71F2Q6NXP2 309 aa8.05□□□□□ -1.12
FOXN4-201ENST00000299162 SRSF12Q8WXF0 261 aaKnown RBP8.05□□□□□ -1.12
FOXN4-201ENST00000299162 GNB1LQ9BYB4 327 aa8.05□□□□□ -1.12
FOXN4-201ENST00000299162 SS18L2Q9UHA2 77 aa8.05□□□□□ -1.12
FOXN4-201ENST00000299162 MRPS16Q9Y3D3 137 aaKnown RBP8.05□□□□□ -1.12
FOXN4-201ENST00000299162 CUBNO60494 3623 aa8.05□□□□□ -1.12
FOXN4-201ENST00000299162 TNFRSF13BO14836 293 aaPredicted RBP8.05□□□□□ -1.12
FOXN4-201ENST00000299162 RPL24P83731 157 aaKnown RBP8.05□□□□□ -1.12
FOXN4-201ENST00000299162 PATE2Q6UY27 113 aa8.05□□□□□ -1.12
FOXN4-201ENST00000299162 SLC25A5P05141 298 aaKnown RBP8.05□□□□□ -1.12
FOXN4-201ENST00000299162 TCF24Q7RTU0 167 aa8.05□□□□□ -1.12
FOXN4-201ENST00000299162 SLC25A2Q9BXI2 301 aa8.05□□□□□ -1.12
FOXN4-201ENST00000299162 TMEM167BQ9NRX6 74 aa8.05□□□□□ -1.12
FOXN4-201ENST00000299162 GAGE10A6NGK3 116 aa8.04□□□□□ -1.12
FOXN4-201ENST00000299162 LIPFP07098 398 aa8.04□□□□□ -1.12
FOXN4-201ENST00000299162 CX3CL1P78423 397 aa8.04□□□□□ -1.12
FOXN4-201ENST00000299162 KAAG1Q9UBP8 84 aa8.04□□□□□ -1.12
FOXN4-201ENST00000299162 NOTCH3Q9UM47 2321 aa8.04□□□□□ -1.12
FOXN4-201ENST00000299162 TRAV8-1A0A0A6YYK1 113 aa8.04□□□□□ -1.12
FOXN4-201ENST00000299162 PGPA6NDG6 321 aa8.04□□□□□ -1.12
FOXN4-201ENST00000299162 HLA-DQA1P01909 254 aa8.04□□□□□ -1.12
FOXN4-201ENST00000299162 HTR1DP28221 377 aa8.04□□□□□ -1.12
FOXN4-201ENST00000299162 FXYD7P58549 80 aa8.04□□□□□ -1.12
FOXN4-201ENST00000299162 SLC25A34Q6PIV7 304 aa8.04□□□□□ -1.12
FOXN4-201ENST00000299162 AMMECR1Q9Y4X0 333 aaPredicted RBP8.04□□□□□ -1.12
FOXN4-201ENST00000299162 ZNF462Q96JM2 2506 aa8.04□□□□□ -1.12
FOXN4-201ENST00000299162 IGLV1-47P01700 117 aa8.04□□□□□ -1.12
FOXN4-201ENST00000299162 IGLC1P0CG04 106 aa8.04□□□□□ -1.12
FOXN4-201ENST00000299162 GNLYP22749 145 aa8.04□□□□□ -1.12
FOXN4-201ENST00000299162 TMEM70Q9BUB7 260 aa8.04□□□□□ -1.12
FOXN4-201ENST00000299162 IGSF10Q6WRI0 2623 aa8.04□□□□□ -1.12
FOXN4-201ENST00000299162 IGKV1D-37A0A075B6S9 117 aa8.03□□□□□ -1.12
FOXN4-201ENST00000299162 TCRBV4S1A1TA0A5B7 111 aa8.03□□□□□ -1.12
FOXN4-201ENST00000299162 ISLRO14498 428 aa8.03□□□□□ -1.12
FOXN4-201ENST00000299162 UCNP55089 124 aa8.03□□□□□ -1.12
FOXN4-201ENST00000299162 C5orf64Q2M2E5 130 aa8.03□□□□□ -1.12
FOXN4-201ENST00000299162 MT-ND6P03923 174 aa8.03□□□□□ -1.12
FOXN4-201ENST00000299162 HIGD1CA8MV81 97 aa8.02□□□□□ -1.12
FOXN4-201ENST00000299162 TMEM30BQ3MIR4 351 aa8.02□□□□□ -1.12
FOXN4-201ENST00000299162 OR10J3Q5JRS4 329 aa8.02□□□□□ -1.12
FOXN4-201ENST00000299162 H3BUT2 72 aa8.02□□□□□ -1.13
FOXN4-201ENST00000299162 LEPROTL1O95214 131 aa8.02□□□□□ -1.13
FOXN4-201ENST00000299162 MRGPRG-AS1Q2M3A8 158 aa8.02□□□□□ -1.13
FOXN4-201ENST00000299162 Q71RC1 249 aaPredicted RBP8.02□□□□□ -1.13
FOXN4-201ENST00000299162 FAM167A-AS1Q96KT0 104 aa8.02□□□□□ -1.13
FOXN4-201ENST00000299162 PGLYRP4Q96LB8 373 aa8.02□□□□□ -1.13
FOXN4-201ENST00000299162 HIF1ANQ9NWT6 349 aa8.02□□□□□ -1.13
FOXN4-201ENST00000299162 IGHV3OR16-13A0A075B7E8 117 aa8.02□□□□□ -1.13
FOXN4-201ENST00000299162 IGHV3-74A0A0B4J1X5 117 aa8.02□□□□□ -1.13
FOXN4-201ENST00000299162 C7orf71A4D174 169 aa8.02□□□□□ -1.13
FOXN4-201ENST00000299162 C19orf84I3L1E1 186 aa8.02□□□□□ -1.13
FOXN4-201ENST00000299162 ZFP36P26651 326 aaKnown RBP8.02□□□□□ -1.13
FOXN4-201ENST00000299162 FOXE3Q13461 319 aa8.02□□□□□ -1.13
FOXN4-201ENST00000299162 BCL6BQ8N143 479 aaPredicted RBP8.02□□□□□ -1.13
FOXN4-201ENST00000299162 DYNAPQ8N1N2 210 aa8.02□□□□□ -1.13
FOXN4-201ENST00000299162 EXOC3-AS1Q8N2X6 119 aa8.02□□□□□ -1.13
FOXN4-201ENST00000299162 SONP18583 2426 aaKnown RBP8.01□□□□□ -1.13
FOXN4-201ENST00000299162 CLEC3BP05452 202 aa8.01□□□□□ -1.13
FOXN4-201ENST00000299162 WFDC3Q8IUB2 231 aa8.01□□□□□ -1.13
FOXN4-201ENST00000299162 LINC00311Q8N616 119 aa8.01□□□□□ -1.13
FOXN4-201ENST00000299162 OR4A5Q8NH83 315 aa8.01□□□□□ -1.13
FOXN4-201ENST00000299162 RASL11BQ9BPW5 248 aa8.01□□□□□ -1.13
FOXN4-201ENST00000299162 DPM3Q9P2X0 92 aa8.01□□□□□ -1.13
FOXN4-201ENST00000299162 F11RQ9Y624 299 aaKnown RBP8.01□□□□□ -1.13
FOXN4-201ENST00000299162 LOC389332A0A1B0GUA5 103 aa8.01□□□□□ -1.13
FOXN4-201ENST00000299162 BVES-AS1Q5T3Y7 98 aa8.01□□□□□ -1.13
FOXN4-201ENST00000299162 LINC00527Q9UJ94 153 aa8.01□□□□□ -1.13
FOXN4-201ENST00000299162 ZANQ9Y493 2812 aa8.01□□□□□ -1.13
FOXN4-201ENST00000299162 GDF5OSQ5U4N7 250 aa8.01□□□□□ -1.13
FOXN4-201ENST00000299162 VMO1Q7Z5L0 202 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms