RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 TCF15Q12870 199 aa13.37□□□□□ -0.27
SNAPC4-201ENST00000298532 ABCA1O95477 2261 aa13.37□□□□□ -0.27
SNAPC4-201ENST00000298532 COLCA1Q6ZS62 124 aa13.37□□□□□ -0.27
SNAPC4-201ENST00000298532 K7EP34 96 aa13.36□□□□□ -0.27
SNAPC4-201ENST00000298532 C15orf32Q32M92 178 aa13.36□□□□□ -0.27
SNAPC4-201ENST00000298532 ZNF114Q8NC26 417 aa13.36□□□□□ -0.27
SNAPC4-201ENST00000298532 A0A0U1RRA0 63 aa13.36□□□□□ -0.27
SNAPC4-201ENST00000298532 IGKV1-39P01597 117 aa13.36□□□□□ -0.27
SNAPC4-201ENST00000298532 IGKV1D-39P04432 117 aa13.36□□□□□ -0.27
SNAPC4-201ENST00000298532 C11orf68Q9H3H3 251 aaKnown RBP13.36□□□□□ -0.27
SNAPC4-201ENST00000298532 SMIM27A0A1W2PRY6 76 aa13.36□□□□□ -0.27
SNAPC4-201ENST00000298532 TNFRSF6BO95407 300 aa13.36□□□□□ -0.27
SNAPC4-201ENST00000298532 PDE6HQ13956 83 aa13.36□□□□□ -0.27
SNAPC4-201ENST00000298532 COA6Q5JTJ3 125 aaKnown RBP13.36□□□□□ -0.27
SNAPC4-201ENST00000298532 C9orf139Q6ZV77 190 aa13.36□□□□□ -0.27
SNAPC4-201ENST00000298532 ETV2O00321 342 aaPredicted RBP13.35□□□□□ -0.27
SNAPC4-201ENST00000298532 CDPF1Q6NVV7 123 aa13.35□□□□□ -0.27
SNAPC4-201ENST00000298532 SIGLEC9Q9Y336 463 aa13.35□□□□□ -0.27
SNAPC4-201ENST00000298532 WNK2Q9Y3S1 2297 aa13.35□□□□□ -0.27
SNAPC4-201ENST00000298532 TRAV40A0A0B4J280 105 aa13.35□□□□□ -0.27
SNAPC4-201ENST00000298532 J3QKU1 62 aa13.35□□□□□ -0.27
SNAPC4-201ENST00000298532 TRGV2A0A075B6R0 118 aa13.35□□□□□ -0.27
SNAPC4-201ENST00000298532 C11orf52Q96A22 123 aa13.35□□□□□ -0.27
SNAPC4-201ENST00000298532 TMEM14BQ9NUH8 114 aa13.35□□□□□ -0.27
SNAPC4-201ENST00000298532 TSSC4Q9Y5U2 329 aaPredicted RBP13.35□□□□□ -0.27
SNAPC4-201ENST00000298532 ROS1P08922 2347 aa13.35□□□□□ -0.27
SNAPC4-201ENST00000298532 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.35□□□□□ -0.27
SNAPC4-201ENST00000298532 SLC25A20O43772 301 aa13.35□□□□□ -0.27
SNAPC4-201ENST00000298532 WNT2P09544 360 aa13.35□□□□□ -0.27
SNAPC4-201ENST00000298532 GAFA1Q96PS6 74 aa13.35□□□□□ -0.27
SNAPC4-201ENST00000298532 SHANK2-AS3Q9BTD1 123 aa13.35□□□□□ -0.27
SNAPC4-201ENST00000298532 LYNX1G3V0Z9 82 aa13.34□□□□□ -0.27
SNAPC4-201ENST00000298532 IGKV1-16P04430 117 aa13.34□□□□□ -0.27
SNAPC4-201ENST00000298532 LYNX1P0DP58 116 aa13.34□□□□□ -0.27
SNAPC4-201ENST00000298532 KIR2DL5BA0A0G2JN68 375 aa13.34□□□□□ -0.27
SNAPC4-201ENST00000298532 KIR2DL5BA0A0G2JPC4 375 aa13.34□□□□□ -0.27
SNAPC4-201ENST00000298532 MBD3L4A6NDZ8 208 aaPredicted RBP13.34□□□□□ -0.27
SNAPC4-201ENST00000298532 MBD3L3A6NE82 208 aaPredicted RBP13.34□□□□□ -0.27
SNAPC4-201ENST00000298532 MBD3L5A6NJ08 208 aaPredicted RBP13.34□□□□□ -0.27
SNAPC4-201ENST00000298532 C9JAW5 83 aa13.34□□□□□ -0.27
SNAPC4-201ENST00000298532 FAM104BQ5XKR9 115 aa13.34□□□□□ -0.27
SNAPC4-201ENST00000298532 IGF2-ASQ6U949 168 aa13.34□□□□□ -0.27
SNAPC4-201ENST00000298532 KIR2DL5AQ8N109 375 aa13.34□□□□□ -0.27
SNAPC4-201ENST00000298532 MBD3L2Q8NHZ7 208 aaPredicted RBP13.34□□□□□ -0.27
SNAPC4-201ENST00000298532 CSTL1Q9H114 145 aa13.34□□□□□ -0.27
SNAPC4-201ENST00000298532 IGHV1-24A0A0C4DH33 117 aa13.34□□□□□ -0.27
SNAPC4-201ENST00000298532 F8W1H4 67 aa13.34□□□□□ -0.27
SNAPC4-201ENST00000298532 ZNF876PQ49A33 203 aa13.34□□□□□ -0.27
SNAPC4-201ENST00000298532 LINC00477Q96M19 166 aa13.34□□□□□ -0.27
SNAPC4-201ENST00000298532 TMEM178BH3BS89 294 aa13.33□□□□□ -0.27
SNAPC4-201ENST00000298532 THBDP07204 575 aa13.33□□□□□ -0.27
SNAPC4-201ENST00000298532 SPTBN2O15020 2390 aa13.33□□□□□ -0.28
SNAPC4-201ENST00000298532 WIPF3A6NGB9 483 aa13.33□□□□□ -0.28
SNAPC4-201ENST00000298532 HAPLN4Q86UW8 402 aa13.33□□□□□ -0.28
SNAPC4-201ENST00000298532 TMEM75Q8N9X5 138 aa13.33□□□□□ -0.28
SNAPC4-201ENST00000298532 PRO3102Q9H379 93 aa13.33□□□□□ -0.28
SNAPC4-201ENST00000298532 LGALS1P09382 135 aaKnown RBP13.33□□□□□ -0.28
SNAPC4-201ENST00000298532 LMO1P25800 156 aa13.33□□□□□ -0.28
SNAPC4-201ENST00000298532 CFHR2P36980 270 aa13.33□□□□□ -0.28
SNAPC4-201ENST00000298532 LGALS9BQ3B8N2 356 aa13.33□□□□□ -0.28
SNAPC4-201ENST00000298532 ETDBQ3ZM63 59 aa13.33□□□□□ -0.28
SNAPC4-201ENST00000298532 LGALS9CQ6DKI2 356 aa13.33□□□□□ -0.28
SNAPC4-201ENST00000298532 TCF20Q9UGU0 1960 aaKnown RBP13.33□□□□□ -0.28
SNAPC4-201ENST00000298532 BVES-AS1Q5T3Y7 98 aa13.33□□□□□ -0.28
SNAPC4-201ENST00000298532 C14orf178Q8N769 122 aaPredicted RBP13.33□□□□□ -0.28
SNAPC4-201ENST00000298532 KLF12Q9Y4X4 402 aa13.33□□□□□ -0.28
SNAPC4-201ENST00000298532 TMEM86BQ8N661 226 aa13.32□□□□□ -0.28
SNAPC4-201ENST00000298532 PEMTQ9UBM1 199 aa13.32□□□□□ -0.28
SNAPC4-201ENST00000298532 TRBV20-1A0A075B6N2 111 aa13.32□□□□□ -0.28
SNAPC4-201ENST00000298532 OOSP1A8MZH6 123 aa13.32□□□□□ -0.28
SNAPC4-201ENST00000298532 Q0VFX4 171 aa13.32□□□□□ -0.28
SNAPC4-201ENST00000298532 C7orf69Q9H7B7 122 aa13.32□□□□□ -0.28
SNAPC4-201ENST00000298532 TMEM213A2RRL7 107 aa13.32□□□□□ -0.28
SNAPC4-201ENST00000298532 PRSS46E5RG02 174 aa13.32□□□□□ -0.28
SNAPC4-201ENST00000298532 C5orf64Q2M2E5 130 aa13.32□□□□□ -0.28
SNAPC4-201ENST00000298532 PI4KAP42356 2102 aa13.31□□□□□ -0.28
SNAPC4-201ENST00000298532 SRSF8Q9BRL6 282 aaKnown RBP13.31□□□□□ -0.28
SNAPC4-201ENST00000298532 TRAV41A0A0B4J266 112 aa13.31□□□□□ -0.28
SNAPC4-201ENST00000298532 LY6G6EA0A0G2JKS1 128 aa13.31□□□□□ -0.28
SNAPC4-201ENST00000298532 SRRM4A7MD48 611 aaKnown RBP13.31□□□□□ -0.28
SNAPC4-201ENST00000298532 NPC2P61916 151 aa13.31□□□□□ -0.28
SNAPC4-201ENST00000298532 DTX1Q86Y01 620 aa13.31□□□□□ -0.28
SNAPC4-201ENST00000298532 PPDPFLQ8WWR9 84 aa13.31□□□□□ -0.28
SNAPC4-201ENST00000298532 U3KQA8 63 aa13.31□□□□□ -0.28
SNAPC4-201ENST00000298532 HAX1O00165 279 aa13.31□□□□□ -0.28
SNAPC4-201ENST00000298532 EFNA4P52798 201 aa13.31□□□□□ -0.28
SNAPC4-201ENST00000298532 ZNF474Q6S9Z5 364 aaPredicted RBP13.31□□□□□ -0.28
SNAPC4-201ENST00000298532 A0A1W2PPI3 338 aa13.3□□□□□ -0.28
SNAPC4-201ENST00000298532 A0A1W2PPM0 123 aa13.3□□□□□ -0.28
SNAPC4-201ENST00000298532 PYGO2Q9BRQ0 406 aa13.3□□□□□ -0.28
SNAPC4-201ENST00000298532 TICRRQ7Z2Z1 1910 aa13.3□□□□□ -0.28
SNAPC4-201ENST00000298532 C1orf122Q6ZSJ8 110 aa13.3□□□□□ -0.28
SNAPC4-201ENST00000298532 CACNA1HO95180 2353 aa13.3□□□□□ -0.28
SNAPC4-201ENST00000298532 CRPP02741 224 aa13.3□□□□□ -0.28
SNAPC4-201ENST00000298532 LINC00158P58513 81 aa13.3□□□□□ -0.28
SNAPC4-201ENST00000298532 INTS1Q8N201 2190 aaKnown RBP13.29□□□□□ -0.28
SNAPC4-201ENST00000298532 GPR179Q6PRD1 2367 aa13.29□□□□□ -0.28
SNAPC4-201ENST00000298532 RCHY1Q96PM5 261 aa13.29□□□□□ -0.28
SNAPC4-201ENST00000298532 DOPEY2Q9Y3R5 2298 aa13.29□□□□□ -0.28
SNAPC4-201ENST00000298532 ADARB2-AS1A8MUL3 147 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms