RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 WDR73Q6P4I2 378 aa9.19□□□□□ -0.94
RHO-201ENST00000296271 BPIFA4PQ86YQ2 179 aa9.19□□□□□ -0.94
RHO-201ENST00000296271 C18orf32Q8TCD1 76 aa9.19□□□□□ -0.94
RHO-201ENST00000296271 FMC1Q96HJ9 113 aa9.19□□□□□ -0.94
RHO-201ENST00000296271 PRSS22Q9GZN4 317 aa9.19□□□□□ -0.94
RHO-201ENST00000296271 RPP21Q9H633 154 aaKnown RBP9.19□□□□□ -0.94
RHO-201ENST00000296271 IGHV3-49A0A0A0MS15 119 aa9.19□□□□□ -0.94
RHO-201ENST00000296271 TRBV9A0A0B4J1U6 114 aa9.19□□□□□ -0.94
RHO-201ENST00000296271 P01737 135 aa9.19□□□□□ -0.94
RHO-201ENST00000296271 GPX1P07203 203 aa9.19□□□□□ -0.94
RHO-201ENST00000296271 AMTP48728 403 aa9.19□□□□□ -0.94
RHO-201ENST00000296271 MFAP4P55083 255 aa9.19□□□□□ -0.94
RHO-201ENST00000296271 TTC9CQ8N5M4 171 aa9.19□□□□□ -0.94
RHO-201ENST00000296271 TMEM14CQ9P0S9 112 aa9.19□□□□□ -0.94
RHO-201ENST00000296271 MUC21A0A0G2JKD1 596 aa9.18□□□□□ -0.94
RHO-201ENST00000296271 MUC21A0A140T8X8 626 aa9.18□□□□□ -0.94
RHO-201ENST00000296271 NPIPB5A8MRT5 1133 aa9.18□□□□□ -0.94
RHO-201ENST00000296271 HLA-DQA1P01909 254 aa9.18□□□□□ -0.94
RHO-201ENST00000296271 GPR183P32249 361 aa9.18□□□□□ -0.94
RHO-201ENST00000296271 PMCHL1Q16048 86 aa9.18□□□□□ -0.94
RHO-201ENST00000296271 MUC21Q5SSG8 566 aa9.18□□□□□ -0.94
RHO-201ENST00000296271 C1orf122Q6ZSJ8 110 aa9.18□□□□□ -0.94
RHO-201ENST00000296271 IGKV2-40A0A087WW87 121 aaPredicted RBP9.18□□□□□ -0.94
RHO-201ENST00000296271 CENPVL3A0A0U1RRI6 287 aa9.18□□□□□ -0.94
RHO-201ENST00000296271 OVOL3O00110 214 aa9.18□□□□□ -0.94
RHO-201ENST00000296271 IGKV2D-40P01614 121 aaPredicted RBP9.18□□□□□ -0.94
RHO-201ENST00000296271 ESDP10768 282 aa9.18□□□□□ -0.94
RHO-201ENST00000296271 COL8A1P27658 744 aa9.18□□□□□ -0.94
RHO-201ENST00000296271 EBI3Q14213 229 aa9.18□□□□□ -0.94
RHO-201ENST00000296271 DNLZQ5SXM8 178 aa9.18□□□□□ -0.94
RHO-201ENST00000296271 CCDC144NLQ6NUI1 221 aa9.18□□□□□ -0.94
RHO-201ENST00000296271 UNQ5815/PRO19632Q6UWF5 114 aa9.18□□□□□ -0.94
RHO-201ENST00000296271 OR4F17Q8NGA8 305 aa9.18□□□□□ -0.94
RHO-201ENST00000296271 SRSF8Q9BRL6 282 aaKnown RBP9.18□□□□□ -0.94
RHO-201ENST00000296271 NRN1Q9NPD7 142 aa9.18□□□□□ -0.94
RHO-201ENST00000296271 C1RLQ9NZP8 487 aa9.18□□□□□ -0.94
RHO-201ENST00000296271 TMSB15BA0A087X1C1 80 aa9.18□□□□□ -0.94
RHO-201ENST00000296271 IGHV4-61A0A0C4DH41 118 aa9.18□□□□□ -0.94
RHO-201ENST00000296271 A0A1B0GV90 55 aa9.18□□□□□ -0.94
RHO-201ENST00000296271 ZNF207O43670 478 aaKnown RBP9.18□□□□□ -0.94
RHO-201ENST00000296271 MT-ND6P03923 174 aa9.18□□□□□ -0.94
RHO-201ENST00000296271 C15orf32Q32M92 178 aa9.18□□□□□ -0.94
RHO-201ENST00000296271 Q8N976 141 aa9.18□□□□□ -0.94
RHO-201ENST00000296271 PAM16Q9Y3D7 125 aa9.18□□□□□ -0.94
RHO-201ENST00000296271 SMAD5-AS1Q9Y6J3 95 aa9.18□□□□□ -0.94
RHO-201ENST00000296271 ABCA12Q86UK0 2595 aa9.17□□□□□ -0.94
RHO-201ENST00000296271 A0A1B0GXF2 115 aa9.17□□□□□ -0.94
RHO-201ENST00000296271 BRS3P32247 399 aa9.17□□□□□ -0.94
RHO-201ENST00000296271 UBE2E1P51965 193 aa9.17□□□□□ -0.94
RHO-201ENST00000296271 ZNF138P52744 262 aa9.17□□□□□ -0.94
RHO-201ENST00000296271 MINOS1Q5TGZ0 78 aa9.17□□□□□ -0.94
RHO-201ENST00000296271 REC114Q7Z4M0 266 aa9.17□□□□□ -0.94
RHO-201ENST00000296271 NIT1Q86X76 327 aa9.17□□□□□ -0.94
RHO-201ENST00000296271 ATOH7Q8N100 152 aa9.17□□□□□ -0.94
RHO-201ENST00000296271 SIGLECL1Q8N7X8 197 aa9.17□□□□□ -0.94
RHO-201ENST00000296271 Q8TAT8 98 aa9.17□□□□□ -0.94
RHO-201ENST00000296271 URB1-AS1Q96HZ7 61 aa9.17□□□□□ -0.94
RHO-201ENST00000296271 TPPP3Q9BW30 176 aa9.17□□□□□ -0.94
RHO-201ENST00000296271 MINOS1-NBL1R4GNA1 71 aa9.17□□□□□ -0.94
RHO-201ENST00000296271 EREGO14944 169 aa9.17□□□□□ -0.94
RHO-201ENST00000296271 LCN12Q6JVE5 192 aa9.17□□□□□ -0.94
RHO-201ENST00000296271 DAZAP1Q96EP5 407 aaKnown RBP9.17□□□□□ -0.94
RHO-201ENST00000296271 ALKBH7Q9BT30 221 aaPredicted RBP9.17□□□□□ -0.94
RHO-201ENST00000296271 PSG8Q9UQ74 426 aa9.17□□□□□ -0.94
RHO-201ENST00000296271 SELENOKQ9Y6D0 94 aa9.17□□□□□ -0.94
RHO-201ENST00000296271 DIRC3C9JPN6 131 aa9.16□□□□□ -0.94
RHO-201ENST00000296271 CLEC3BP05452 202 aa9.16□□□□□ -0.94
RHO-201ENST00000296271 FAM106CPP0CH98 169 aa9.16□□□□□ -0.94
RHO-201ENST00000296271 PAFAH1B2P68402 229 aa9.16□□□□□ -0.94
RHO-201ENST00000296271 KCNS1Q96KK3 526 aa9.16□□□□□ -0.94
RHO-201ENST00000296271 NPFFO15130 113 aa9.16□□□□□ -0.94
RHO-201ENST00000296271 APOHP02749 345 aaPredicted RBP9.16□□□□□ -0.94
RHO-201ENST00000296271 PRB1P04280 392 aa9.16□□□□□ -0.94
RHO-201ENST00000296271 RHOGP84095 191 aa9.16□□□□□ -0.94
RHO-201ENST00000296271 MAJINQ3KP22 176 aa9.16□□□□□ -0.94
RHO-201ENST00000296271 OR10J3Q5JRS4 329 aa9.16□□□□□ -0.94
RHO-201ENST00000296271 DOPEY2Q9Y3R5 2298 aa9.15□□□□□ -0.94
RHO-201ENST00000296271 ZNF324O75467 553 aaPredicted RBP9.15□□□□□ -0.94
RHO-201ENST00000296271 IGHG4P01861 327 aa9.15□□□□□ -0.94
RHO-201ENST00000296271 ARMS2P0C7Q2 107 aa9.15□□□□□ -0.94
RHO-201ENST00000296271 RNASEKQ6P5S7 137 aaKnown RBP9.15□□□□□ -0.94
RHO-201ENST00000296271 CLEC19AQ6UXS0 136 aa9.15□□□□□ -0.94
RHO-201ENST00000296271 WIPF2Q8TF74 440 aaPredicted RBP9.15□□□□□ -0.94
RHO-201ENST00000296271 PTPN13Q12923 2485 aa9.15□□□□□ -0.94
RHO-201ENST00000296271 EPG5Q9HCE0 2579 aa9.15□□□□□ -0.95
RHO-201ENST00000296271 A8MWL6 223 aa9.15□□□□□ -0.95
RHO-201ENST00000296271 IGHV4-38-2P0DP08 117 aa9.15□□□□□ -0.95
RHO-201ENST00000296271 PSG3Q16557 428 aa9.15□□□□□ -0.95
RHO-201ENST00000296271 RNF182Q8N6D2 247 aa9.15□□□□□ -0.95
RHO-201ENST00000296271 VGLL1Q99990 258 aa9.15□□□□□ -0.95
RHO-201ENST00000296271 TRAV40A0A0B4J280 105 aa9.14□□□□□ -0.95
RHO-201ENST00000296271 C3orf79P0CE67 100 aa9.14□□□□□ -0.95
RHO-201ENST00000296271 HBBP68871 147 aa9.14□□□□□ -0.95
RHO-201ENST00000296271 LY6EQ16553 131 aa9.14□□□□□ -0.95
RHO-201ENST00000296271 C1orf194Q5T5A4 169 aa9.14□□□□□ -0.95
RHO-201ENST00000296271 LINC00173Q6ZV60 143 aa9.14□□□□□ -0.95
RHO-201ENST00000296271 SPATA12Q7Z6I5 190 aa9.14□□□□□ -0.95
RHO-201ENST00000296271 CCDC140Q96MF4 163 aa9.14□□□□□ -0.95
RHO-201ENST00000296271 CLEC5AQ9NY25 188 aa9.14□□□□□ -0.95
RHO-201ENST00000296271 ZNF492Q9P255 531 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms