RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 PYYP10082 97 aa16.79■□□□□ 0.28
LINC01116-201ENST00000295549 EIF5AL1Q6IS14 154 aaKnown RBP16.79■□□□□ 0.28
LINC01116-201ENST00000295549 RAB24Q969Q5 203 aa16.79■□□□□ 0.28
LINC01116-201ENST00000295549 PAXXQ9BUH6 204 aa16.79■□□□□ 0.28
LINC01116-201ENST00000295549 A8MZ25 164 aa16.79■□□□□ 0.28
LINC01116-201ENST00000295549 OR7C2O60412 319 aa16.79■□□□□ 0.28
LINC01116-201ENST00000295549 DEFB131AP59861 70 aa16.79■□□□□ 0.28
LINC01116-201ENST00000295549 PQLC2Q6ZP29 291 aa16.79■□□□□ 0.28
LINC01116-201ENST00000295549 DEFB125Q8N687 156 aa16.79■□□□□ 0.28
LINC01116-201ENST00000295549 RNF141Q8WVD5 230 aa16.79■□□□□ 0.28
LINC01116-201ENST00000295549 TMED6Q8WW62 240 aa16.79■□□□□ 0.28
LINC01116-201ENST00000295549 SAT2Q96F10 170 aaPredicted RBP16.79■□□□□ 0.28
LINC01116-201ENST00000295549 ZNF503Q96F45 646 aa16.79■□□□□ 0.28
LINC01116-201ENST00000295549 WFDC10AQ9H1F0 79 aa16.79■□□□□ 0.28
LINC01116-201ENST00000295549 ZNF586Q9NXT0 402 aa16.79■□□□□ 0.28
LINC01116-201ENST00000295549 PLA2G2EQ9NZK7 142 aa16.79■□□□□ 0.28
LINC01116-201ENST00000295549 TRBV19A0A075B6N1 114 aa16.78■□□□□ 0.28
LINC01116-201ENST00000295549 SNRPCP09234 159 aaKnown RBP16.78■□□□□ 0.28
LINC01116-201ENST00000295549 STAG3L2P0CL84 134 aa16.78■□□□□ 0.28
LINC01116-201ENST00000295549 STAG3L3P0CL85 134 aa16.78■□□□□ 0.28
LINC01116-201ENST00000295549 PDE6HQ13956 83 aa16.78■□□□□ 0.28
LINC01116-201ENST00000295549 PSMG4Q5JS54 123 aa16.78■□□□□ 0.28
LINC01116-201ENST00000295549 LRRC20Q8TCA0 184 aa16.78■□□□□ 0.28
LINC01116-201ENST00000295549 FXYD5Q96DB9 178 aa16.78■□□□□ 0.28
LINC01116-201ENST00000295549 TRAV8-2A0A0B4J237 113 aa16.77■□□□□ 0.27
LINC01116-201ENST00000295549 ZNF253O75346 499 aa16.77■□□□□ 0.27
LINC01116-201ENST00000295549 NBEAP1P0C6P0 100 aa16.77■□□□□ 0.27
LINC01116-201ENST00000295549 IGHV4-30-4P0DP06 118 aa16.77■□□□□ 0.27
LINC01116-201ENST00000295549 MRAPQ8TCY5 172 aa16.77■□□□□ 0.27
LINC01116-201ENST00000295549 SLC50A1Q9BRV3 221 aa16.77■□□□□ 0.27
LINC01116-201ENST00000295549 ZNF331Q9NQX6 463 aaPredicted RBP16.77■□□□□ 0.27
LINC01116-201ENST00000295549 CTXND1A0A1B0GTU2 59 aa16.76■□□□□ 0.27
LINC01116-201ENST00000295549 EIF3GO75821 320 aaKnown RBP eCLIP16.76■□□□□ 0.27
LINC01116-201ENST00000295549 ZNF726P1Q15940 193 aa16.76■□□□□ 0.27
LINC01116-201ENST00000295549 APRG1Q8IVJ8 170 aa16.76■□□□□ 0.27
LINC01116-201ENST00000295549 BOLA1Q9Y3E2 137 aa16.76■□□□□ 0.27
LINC01116-201ENST00000295549 H3BTX0 84 aa16.75■□□□□ 0.27
LINC01116-201ENST00000295549 SLC17A3O00476 420 aa16.75■□□□□ 0.27
LINC01116-201ENST00000295549 HMGB3O15347 200 aaKnown RBP16.75■□□□□ 0.27
LINC01116-201ENST00000295549 OR10J4P0C629 311 aa16.75■□□□□ 0.27
LINC01116-201ENST00000295549 DEFB121Q5J5C9 76 aa16.75■□□□□ 0.27
LINC01116-201ENST00000295549 DPPA3Q6W0C5 159 aa16.75■□□□□ 0.27
LINC01116-201ENST00000295549 LINC00052Q96N35 136 aa16.75■□□□□ 0.27
LINC01116-201ENST00000295549 CITED4Q96RK1 184 aa16.75■□□□□ 0.27
LINC01116-201ENST00000295549 TUBA4BQ9H853 241 aa16.75■□□□□ 0.27
LINC01116-201ENST00000295549 CLEC5AQ9NY25 188 aa16.75■□□□□ 0.27
LINC01116-201ENST00000295549 BOLA2-SMG1P6H3BVE0 249 aa16.74■□□□□ 0.27
LINC01116-201ENST00000295549 ARL14EPLP0DKL9 152 aa16.74■□□□□ 0.27
LINC01116-201ENST00000295549 UBE2L3P68036 154 aaKnown RBP16.74■□□□□ 0.27
LINC01116-201ENST00000295549 SSX7Q7RTT5 188 aa16.74■□□□□ 0.27
LINC01116-201ENST00000295549 C20orf173Q96LM9 149 aa16.74■□□□□ 0.27
LINC01116-201ENST00000295549 SRD5A3Q9H8P0 318 aa16.74■□□□□ 0.27
LINC01116-201ENST00000295549 NDUFB4O95168 129 aa16.73■□□□□ 0.27
LINC01116-201ENST00000295549 CXorf1O96002 111 aa16.73■□□□□ 0.27
LINC01116-201ENST00000295549 FHITP49789 147 aa16.73■□□□□ 0.27
LINC01116-201ENST00000295549 RAB5CP51148 216 aa16.73■□□□□ 0.27
LINC01116-201ENST00000295549 PSG9Q00887 426 aa16.73■□□□□ 0.27
LINC01116-201ENST00000295549 ZNF124Q15973 351 aa16.73■□□□□ 0.27
LINC01116-201ENST00000295549 IGFL4Q6B9Z1 124 aa16.73■□□□□ 0.27
LINC01116-201ENST00000295549 BLNKQ8WV28 456 aa16.73■□□□□ 0.27
LINC01116-201ENST00000295549 PHYHIPLQ96FC7 376 aa16.73■□□□□ 0.27
LINC01116-201ENST00000295549 RNF182Q8N6D2 247 aa16.72■□□□□ 0.27
LINC01116-201ENST00000295549 PSG3Q16557 428 aa16.71■□□□□ 0.27
LINC01116-201ENST00000295549 SUN5Q8TC36 379 aa16.71■□□□□ 0.27
LINC01116-201ENST00000295549 GCHFRP30047 84 aa16.7■□□□□ 0.26
LINC01116-201ENST00000295549 SULT1A2P50226 295 aa16.7■□□□□ 0.26
LINC01116-201ENST00000295549 LINC00322Q6ZN03 302 aaPredicted RBP16.7■□□□□ 0.26
LINC01116-201ENST00000295549 LYPD1Q8N2G4 141 aa16.7■□□□□ 0.26
LINC01116-201ENST00000295549 FAM213BQ8TBF2 198 aa16.7■□□□□ 0.26
LINC01116-201ENST00000295549 PRKDCP78527 4128 aaKnown RBP16.7■□□□□ 0.26
LINC01116-201ENST00000295549 RBMY1BA6NDE4 496 aaKnown RBP16.7■□□□□ 0.26
LINC01116-201ENST00000295549 RBMY1EA6NEQ0 496 aaKnown RBP16.7■□□□□ 0.26
LINC01116-201ENST00000295549 RBMY1DP0C7P1 496 aaKnown RBP16.7■□□□□ 0.26
LINC01116-201ENST00000295549 FRMD6-AS1P0C7T7 363 aa16.7■□□□□ 0.26
LINC01116-201ENST00000295549 FOXI2Q6ZQN5 318 aa16.7■□□□□ 0.26
LINC01116-201ENST00000295549 MBD3L1Q8WWY6 194 aa16.7■□□□□ 0.26
LINC01116-201ENST00000295549 TMEM167BQ9NRX6 74 aa16.7■□□□□ 0.26
LINC01116-201ENST00000295549 MAP1LC3B2A6NCE7 125 aa16.69■□□□□ 0.26
LINC01116-201ENST00000295549 HLA-DMBP28068 263 aa16.69■□□□□ 0.26
LINC01116-201ENST00000295549 MRPL53Q96EL3 112 aaKnown RBP16.69■□□□□ 0.26
LINC01116-201ENST00000295549 MAP1LC3BQ9GZQ8 125 aa16.69■□□□□ 0.26
LINC01116-201ENST00000295549 SAV1Q9H4B6 383 aaPredicted RBP16.69■□□□□ 0.26
LINC01116-201ENST00000295549 AAMDCQ9H7C9 122 aa16.69■□□□□ 0.26
LINC01116-201ENST00000295549 KNCNA6PVL3 124 aa16.68■□□□□ 0.26
LINC01116-201ENST00000295549 ACTL10Q5JWF8 245 aa16.68■□□□□ 0.26
LINC01116-201ENST00000295549 STHQ8IWL8 128 aa16.68■□□□□ 0.26
LINC01116-201ENST00000295549 ZNF738Q8NE65 137 aa16.68■□□□□ 0.26
LINC01116-201ENST00000295549 PRELID1Q9Y255 219 aa16.68■□□□□ 0.26
LINC01116-201ENST00000295549 LOC102724200A0A096LPH7 203 aaPredicted RBP16.67■□□□□ 0.26
LINC01116-201ENST00000295549 HLA-DRB4P13762 266 aa16.67■□□□□ 0.26
LINC01116-201ENST00000295549 RANP62826 216 aaKnown RBP16.67■□□□□ 0.26
LINC01116-201ENST00000295549 EBLN2Q6P2I7 272 aa16.67■□□□□ 0.26
LINC01116-201ENST00000295549 EXOC3-AS1Q8N2X6 119 aa16.67■□□□□ 0.26
LINC01116-201ENST00000295549 SFT2D1Q8WV19 159 aa16.67■□□□□ 0.26
LINC01116-201ENST00000295549 RPUSD4Q96CM3 377 aaKnown RBP16.67■□□□□ 0.26
LINC01116-201ENST00000295549 HLA-DRB4X5D2U9 266 aa16.67■□□□□ 0.26
LINC01116-201ENST00000295549 A0A0J9YX75 114 aa16.66■□□□□ 0.26
LINC01116-201ENST00000295549 H3BMM0 161 aa16.66■□□□□ 0.26
LINC01116-201ENST00000295549 H2AFB1P0C5Y9 115 aa16.66■□□□□ 0.26
LINC01116-201ENST00000295549 FGF8P55075 233 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms