RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 MS4A10Q96PG2 267 aa7.11□□□□□ -1.27
PDPN-201ENST00000294489 FOXC2Q99958 501 aa7.11□□□□□ -1.27
PDPN-201ENST00000294489 AAMDCQ9H7C9 122 aa7.11□□□□□ -1.27
PDPN-201ENST00000294489 MRPS12O15235 138 aaKnown RBP7.11□□□□□ -1.27
PDPN-201ENST00000294489 LTAP01374 205 aa7.11□□□□□ -1.27
PDPN-201ENST00000294489 LY6EQ16553 131 aa7.11□□□□□ -1.27
PDPN-201ENST00000294489 COX19Q49B96 90 aa7.11□□□□□ -1.27
PDPN-201ENST00000294489 HIST3H2BBQ8N257 126 aa7.11□□□□□ -1.27
PDPN-201ENST00000294489 GNB4Q9HAV0 340 aa7.11□□□□□ -1.27
PDPN-201ENST00000294489 SMIM27A0A1W2PRY6 76 aa7.1□□□□□ -1.27
PDPN-201ENST00000294489 IER3P46695 156 aa7.1□□□□□ -1.27
PDPN-201ENST00000294489 RAB9AP51151 201 aa7.1□□□□□ -1.27
PDPN-201ENST00000294489 ATP5G2Q06055 141 aa7.1□□□□□ -1.27
PDPN-201ENST00000294489 PDZD11Q5EBL8 140 aa7.1□□□□□ -1.27
PDPN-201ENST00000294489 SIGLEC15Q6ZMC9 328 aa7.1□□□□□ -1.27
PDPN-201ENST00000294489 GOLT1AQ6ZVE7 132 aa7.1□□□□□ -1.27
PDPN-201ENST00000294489 TMEM183AQ8IXX5 376 aa7.1□□□□□ -1.27
PDPN-201ENST00000294489 BCL6BQ8N143 479 aaPredicted RBP7.1□□□□□ -1.27
PDPN-201ENST00000294489 MAPK1IP1LQ8NDC0 245 aa7.1□□□□□ -1.27
PDPN-201ENST00000294489 NUDT10Q8NFP7 164 aa7.1□□□□□ -1.27
PDPN-201ENST00000294489 NUDT11Q96G61 164 aa7.1□□□□□ -1.27
PDPN-201ENST00000294489 C17orf77Q96MU5 243 aa7.1□□□□□ -1.27
PDPN-201ENST00000294489 MLST8Q9BVC4 326 aa7.1□□□□□ -1.27
PDPN-201ENST00000294489 GPR61Q9BZJ8 451 aa7.1□□□□□ -1.27
PDPN-201ENST00000294489 NBPF19A0A087WUL8 3843 aa7.1□□□□□ -1.27
PDPN-201ENST00000294489 FAM223BA6NKX1 122 aa7.1□□□□□ -1.27
PDPN-201ENST00000294489 LINC00587B1AMM8 73 aa7.1□□□□□ -1.27
PDPN-201ENST00000294489 H3BUA1 57 aa7.1□□□□□ -1.27
PDPN-201ENST00000294489 TCL1AP56279 114 aa7.1□□□□□ -1.27
PDPN-201ENST00000294489 PSG9Q00887 426 aa7.1□□□□□ -1.27
PDPN-201ENST00000294489 DEFB112Q30KQ8 113 aa7.1□□□□□ -1.27
PDPN-201ENST00000294489 GFI1BQ5VTD9 330 aa7.1□□□□□ -1.27
PDPN-201ENST00000294489 WDR73Q6P4I2 378 aa7.1□□□□□ -1.27
PDPN-201ENST00000294489 CLEC19AQ6UXS0 136 aa7.1□□□□□ -1.27
PDPN-201ENST00000294489 FAM223AQ8IWN6 122 aa7.1□□□□□ -1.27
PDPN-201ENST00000294489 GRAMD2BQ96HH9 432 aa7.1□□□□□ -1.27
PDPN-201ENST00000294489 CBLN1P23435 193 aa7.1□□□□□ -1.27
PDPN-201ENST00000294489 CSN1S1P47710 185 aa7.1□□□□□ -1.27
PDPN-201ENST00000294489 CFHR3Q02985 330 aa7.1□□□□□ -1.27
PDPN-201ENST00000294489 COA6Q5JTJ3 125 aaKnown RBP7.1□□□□□ -1.27
PDPN-201ENST00000294489 TOMM20LQ6UXN7 152 aa7.1□□□□□ -1.27
PDPN-201ENST00000294489 Q6YL49 198 aa7.1□□□□□ -1.27
PDPN-201ENST00000294489 DAZAP1Q96EP5 407 aaKnown RBP7.1□□□□□ -1.27
PDPN-201ENST00000294489 GNB1LQ9BYB4 327 aa7.1□□□□□ -1.27
PDPN-201ENST00000294489 CHTOPQ9Y3Y2 248 aaKnown RBP7.1□□□□□ -1.27
PDPN-201ENST00000294489 SVEP1Q4LDE5 3571 aa7.09□□□□□ -1.27
PDPN-201ENST00000294489 ZFHX3Q15911 3703 aa7.09□□□□□ -1.27
PDPN-201ENST00000294489 IGHV3-35A0A0C4DH35 117 aa7.09□□□□□ -1.27
PDPN-201ENST00000294489 IFITM10A6NMD0 228 aa7.09□□□□□ -1.27
PDPN-201ENST00000294489 SNURFLB1AK76 121 aa7.09□□□□□ -1.27
PDPN-201ENST00000294489 MT-ND6P03923 174 aa7.09□□□□□ -1.27
PDPN-201ENST00000294489 PPIFP30405 207 aaKnown RBP7.09□□□□□ -1.27
PDPN-201ENST00000294489 Q86TA4 180 aa7.09□□□□□ -1.27
PDPN-201ENST00000294489 CCDC140Q96MF4 163 aa7.09□□□□□ -1.27
PDPN-201ENST00000294489 TRBV6-1A0A0K0K1D8 114 aa7.09□□□□□ -1.27
PDPN-201ENST00000294489 IZUMO1RA6ND01 250 aa7.09□□□□□ -1.27
PDPN-201ENST00000294489 CA1P00915 261 aaPredicted RBP7.09□□□□□ -1.27
PDPN-201ENST00000294489 PRNTQ86SH4 94 aa7.09□□□□□ -1.27
PDPN-201ENST00000294489 TMEM75Q8N9X5 138 aa7.09□□□□□ -1.27
PDPN-201ENST00000294489 OR5R1Q8NH85 324 aa7.09□□□□□ -1.27
PDPN-201ENST00000294489 MRPL18Q9H0U6 180 aaKnown RBP7.09□□□□□ -1.27
PDPN-201ENST00000294489 ZNF492Q9P255 531 aa7.09□□□□□ -1.27
PDPN-201ENST00000294489 LINC00527Q9UJ94 153 aa7.09□□□□□ -1.27
PDPN-201ENST00000294489 TRAV8-1A0A0A6YYK1 113 aa7.08□□□□□ -1.28
PDPN-201ENST00000294489 SPINK4O60575 86 aa7.08□□□□□ -1.28
PDPN-201ENST00000294489 P01737 135 aa7.08□□□□□ -1.28
PDPN-201ENST00000294489 TRGV3P03979 118 aa7.08□□□□□ -1.28
PDPN-201ENST00000294489 FABP4P15090 132 aa7.08□□□□□ -1.28
PDPN-201ENST00000294489 TSKUQ8WUA8 353 aa7.08□□□□□ -1.28
PDPN-201ENST00000294489 NAT8BQ9UHF3 227 aa7.08□□□□□ -1.28
PDPN-201ENST00000294489 ZFP30Q9Y2G7 519 aa7.08□□□□□ -1.28
PDPN-201ENST00000294489 CELSR1Q9NYQ6 3014 aa7.08□□□□□ -1.28
PDPN-201ENST00000294489 SERTM2A0A1B0GWG4 89 aa7.08□□□□□ -1.28
PDPN-201ENST00000294489 SLC35B1P78383 322 aa7.08□□□□□ -1.28
PDPN-201ENST00000294489 WFDC11Q8NEX6 87 aa7.08□□□□□ -1.28
PDPN-201ENST00000294489 OR10D4PQ8NGN7 298 aa7.08□□□□□ -1.28
PDPN-201ENST00000294489 ZFAND3Q9H8U3 227 aa7.08□□□□□ -1.28
PDPN-201ENST00000294489 ZNF331Q9NQX6 463 aaPredicted RBP7.08□□□□□ -1.28
PDPN-201ENST00000294489 IGHV3OR16-8A0A075B7F1 116 aa7.07□□□□□ -1.28
PDPN-201ENST00000294489 DIRC3C9JPN6 131 aa7.07□□□□□ -1.28
PDPN-201ENST00000294489 IGLV1-40P01703 118 aa7.07□□□□□ -1.28
PDPN-201ENST00000294489 RAB4BP61018 213 aa7.07□□□□□ -1.28
PDPN-201ENST00000294489 CENPEQ02224 2701 aa7.07□□□□□ -1.28
PDPN-201ENST00000294489 PSG3Q16557 428 aa7.07□□□□□ -1.28
PDPN-201ENST00000294489 CT83Q5H943 113 aa7.07□□□□□ -1.28
PDPN-201ENST00000294489 RPP21Q9H633 154 aaKnown RBP7.07□□□□□ -1.28
PDPN-201ENST00000294489 A8MWL6 223 aa7.07□□□□□ -1.28
PDPN-201ENST00000294489 ZNF253O75346 499 aa7.07□□□□□ -1.28
PDPN-201ENST00000294489 IGLV2-11P01706 119 aa7.07□□□□□ -1.28
PDPN-201ENST00000294489 IGHV4-59P01825 116 aa7.07□□□□□ -1.28
PDPN-201ENST00000294489 TPPP2P59282 170 aa7.07□□□□□ -1.28
PDPN-201ENST00000294489 KRTAP1-1Q07627 177 aa7.07□□□□□ -1.28
PDPN-201ENST00000294489 ODF1Q14990 250 aa7.07□□□□□ -1.28
PDPN-201ENST00000294489 MRPL54Q6P161 138 aaKnown RBP7.07□□□□□ -1.28
PDPN-201ENST00000294489 RASL11AQ6T310 242 aa7.07□□□□□ -1.28
PDPN-201ENST00000294489 METTL26Q96S19 204 aa7.07□□□□□ -1.28
PDPN-201ENST00000294489 PSG8Q9UQ74 426 aa7.07□□□□□ -1.28
PDPN-201ENST00000294489 C19orf71A6NCJ1 209 aa7.07□□□□□ -1.28
PDPN-201ENST00000294489 M0R3E3 92 aa7.07□□□□□ -1.28
PDPN-201ENST00000294489 CIDEAO60543 219 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms