RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 SSBP2P81877 361 aaPredicted RBP6.65□□□□□ -1.34
PTPDC1-201ENST00000288976 C15orf32Q32M92 178 aa6.65□□□□□ -1.34
PTPDC1-201ENST00000288976 TTC9CQ8N5M4 171 aa6.65□□□□□ -1.34
PTPDC1-201ENST00000288976 ZNF680Q8NEM1 530 aa6.65□□□□□ -1.34
PTPDC1-201ENST00000288976 TNFRSF18Q9Y5U5 241 aa6.65□□□□□ -1.34
PTPDC1-201ENST00000288976 TMEM89A2RUT3 159 aa6.65□□□□□ -1.35
PTPDC1-201ENST00000288976 FNDC10F2Z333 226 aa6.65□□□□□ -1.35
PTPDC1-201ENST00000288976 HOXA3O43365 443 aaPredicted RBP6.65□□□□□ -1.35
PTPDC1-201ENST00000288976 NDUFB4O95168 129 aa6.65□□□□□ -1.35
PTPDC1-201ENST00000288976 AREGP15514 252 aa6.65□□□□□ -1.35
PTPDC1-201ENST00000288976 ACTL10Q5JWF8 245 aa6.65□□□□□ -1.35
PTPDC1-201ENST00000288976 OR9G4Q8NGQ1 327 aa6.65□□□□□ -1.35
PTPDC1-201ENST00000288976 ARHGAP32A7KAX9 2087 aa6.65□□□□□ -1.35
PTPDC1-201ENST00000288976 IGHV7-81A0A0B4J1V7 117 aa6.64□□□□□ -1.35
PTPDC1-201ENST00000288976 CRLF1O75462 422 aa6.64□□□□□ -1.35
PTPDC1-201ENST00000288976 CRYGCP07315 174 aa6.64□□□□□ -1.35
PTPDC1-201ENST00000288976 TEX38Q6PEX7 206 aa6.64□□□□□ -1.35
PTPDC1-201ENST00000288976 RPRMQ9NS64 109 aa6.64□□□□□ -1.35
PTPDC1-201ENST00000288976 A0A0U1RRA0 63 aa6.64□□□□□ -1.35
PTPDC1-201ENST00000288976 PHOX2AO14813 284 aa6.64□□□□□ -1.35
PTPDC1-201ENST00000288976 TMEM14EPQ6UXP3 125 aa6.64□□□□□ -1.35
PTPDC1-201ENST00000288976 LINC00305Q7Z4B0 112 aa6.64□□□□□ -1.35
PTPDC1-201ENST00000288976 FAM24BQ8N5W8 94 aa6.64□□□□□ -1.35
PTPDC1-201ENST00000288976 GGACTQ9BVM4 153 aa6.64□□□□□ -1.35
PTPDC1-201ENST00000288976 CSMD1Q96PZ7 3565 aa6.64□□□□□ -1.35
PTPDC1-201ENST00000288976 IGLC7A0M8Q6 106 aa6.64□□□□□ -1.35
PTPDC1-201ENST00000288976 DNAJC9-AS1A6NH13 148 aa6.64□□□□□ -1.35
PTPDC1-201ENST00000288976 H0YIZ8 118 aa6.64□□□□□ -1.35
PTPDC1-201ENST00000288976 CRYBB3P26998 211 aa6.64□□□□□ -1.35
PTPDC1-201ENST00000288976 PAX9P55771 341 aa6.64□□□□□ -1.35
PTPDC1-201ENST00000288976 CACNG7P62955 275 aa6.64□□□□□ -1.35
PTPDC1-201ENST00000288976 PARD6GQ9BYG4 376 aaPredicted RBP6.64□□□□□ -1.35
PTPDC1-201ENST00000288976 OR5AC2Q9NZP5 309 aa6.64□□□□□ -1.35
PTPDC1-201ENST00000288976 MYOZ3Q8TDC0 251 aa6.64□□□□□ -1.35
PTPDC1-201ENST00000288976 IGHV3-73A0A0B4J1V6 119 aa6.63□□□□□ -1.35
PTPDC1-201ENST00000288976 KHDC3LQ587J8 217 aa6.63□□□□□ -1.35
PTPDC1-201ENST00000288976 RNASEH2CQ8TDP1 164 aaKnown RBP6.63□□□□□ -1.35
PTPDC1-201ENST00000288976 ISOC2Q96AB3 205 aa6.63□□□□□ -1.35
PTPDC1-201ENST00000288976 SMR3AQ99954 134 aa6.63□□□□□ -1.35
PTPDC1-201ENST00000288976 C16orf95Q9H693 158 aa6.63□□□□□ -1.35
PTPDC1-201ENST00000288976 CRPP02741 224 aa6.63□□□□□ -1.35
PTPDC1-201ENST00000288976 TCF24Q7RTU0 167 aa6.63□□□□□ -1.35
PTPDC1-201ENST00000288976 OR1P1Q8NH06 330 aa6.63□□□□□ -1.35
PTPDC1-201ENST00000288976 C5orf52A6NGY3 159 aa6.63□□□□□ -1.35
PTPDC1-201ENST00000288976 ISLRO14498 428 aa6.63□□□□□ -1.35
PTPDC1-201ENST00000288976 NDUFA7O95182 113 aa6.63□□□□□ -1.35
PTPDC1-201ENST00000288976 NUDT3O95989 172 aa6.63□□□□□ -1.35
PTPDC1-201ENST00000288976 CXorf1O96002 111 aa6.63□□□□□ -1.35
PTPDC1-201ENST00000288976 NBEAP1P0C6P0 100 aa6.63□□□□□ -1.35
PTPDC1-201ENST00000288976 C8orf88P0DMB2 117 aa6.63□□□□□ -1.35
PTPDC1-201ENST00000288976 EGR2P11161 476 aaPredicted RBP6.63□□□□□ -1.35
PTPDC1-201ENST00000288976 TOMM20LQ6UXN7 152 aa6.63□□□□□ -1.35
PTPDC1-201ENST00000288976 PGLYRP4Q96LB8 373 aa6.63□□□□□ -1.35
PTPDC1-201ENST00000288976 ATP6V0BQ99437 205 aa6.63□□□□□ -1.35
PTPDC1-201ENST00000288976 OR51M1Q9H341 326 aa6.63□□□□□ -1.35
PTPDC1-201ENST00000288976 A0A1B0GW64 132 aa6.62□□□□□ -1.35
PTPDC1-201ENST00000288976 CFHR3Q02985 330 aa6.62□□□□□ -1.35
PTPDC1-201ENST00000288976 OTOGQ6ZRI0 2925 aa6.62□□□□□ -1.35
PTPDC1-201ENST00000288976 CTXND1A0A1B0GTU2 59 aa6.62□□□□□ -1.35
PTPDC1-201ENST00000288976 A8MWL6 223 aa6.62□□□□□ -1.35
PTPDC1-201ENST00000288976 OR11H12B2RN74 326 aa6.62□□□□□ -1.35
PTPDC1-201ENST00000288976 VWC2Q2TAL6 325 aa6.62□□□□□ -1.35
PTPDC1-201ENST00000288976 PQLC2Q6ZP29 291 aa6.62□□□□□ -1.35
PTPDC1-201ENST00000288976 RAB24Q969Q5 203 aa6.62□□□□□ -1.35
PTPDC1-201ENST00000288976 HSPB9Q9BQS6 159 aa6.62□□□□□ -1.35
PTPDC1-201ENST00000288976 GSX1Q9H4S2 264 aaPredicted RBP6.62□□□□□ -1.35
PTPDC1-201ENST00000288976 XCL2Q9UBD3 114 aa6.62□□□□□ -1.35
PTPDC1-201ENST00000288976 F11RQ9Y624 299 aaKnown RBP6.62□□□□□ -1.35
PTPDC1-201ENST00000288976 TRGV1A0A0A0MS02 117 aa6.62□□□□□ -1.35
PTPDC1-201ENST00000288976 RNF222A6NCQ9 220 aa6.62□□□□□ -1.35
PTPDC1-201ENST00000288976 GCGP01275 180 aa6.62□□□□□ -1.35
PTPDC1-201ENST00000288976 RNASE2P10153 161 aaKnown RBP6.62□□□□□ -1.35
PTPDC1-201ENST00000288976 GPX4P36969 197 aaPredicted RBP6.62□□□□□ -1.35
PTPDC1-201ENST00000288976 HNRNPA3P51991 378 aaKnown RBP6.62□□□□□ -1.35
PTPDC1-201ENST00000288976 GFI1BQ5VTD9 330 aa6.62□□□□□ -1.35
PTPDC1-201ENST00000288976 TEX261Q6UWH6 196 aa6.62□□□□□ -1.35
PTPDC1-201ENST00000288976 C9orf62Q8N4C0 152 aa6.62□□□□□ -1.35
PTPDC1-201ENST00000288976 OR10W1Q8NGF6 305 aa6.62□□□□□ -1.35
PTPDC1-201ENST00000288976 SEC11CQ9BY50 192 aa6.62□□□□□ -1.35
PTPDC1-201ENST00000288976 ZNF702PQ9H963 129 aa6.62□□□□□ -1.35
PTPDC1-201ENST00000288976 ZMAT5Q9UDW3 170 aaKnown RBP6.62□□□□□ -1.35
PTPDC1-201ENST00000288976 PRSS46E5RG02 174 aa6.62□□□□□ -1.35
PTPDC1-201ENST00000288976 F5H768 121 aa6.62□□□□□ -1.35
PTPDC1-201ENST00000288976 HERVK_113P61574 105 aa6.62□□□□□ -1.35
PTPDC1-201ENST00000288976 DLK1P80370 383 aa6.62□□□□□ -1.35
PTPDC1-201ENST00000288976 KIAA1644Q3SXP7 199 aa6.62□□□□□ -1.35
PTPDC1-201ENST00000288976 OR11H4Q8NGC9 324 aa6.62□□□□□ -1.35
PTPDC1-201ENST00000288976 SLC25A39Q9BZJ4 359 aaPredicted RBP6.62□□□□□ -1.35
PTPDC1-201ENST00000288976 C15orf62A8K5M9 175 aa6.61□□□□□ -1.35
PTPDC1-201ENST00000288976 PMS2P5A8MQ11 134 aa6.61□□□□□ -1.35
PTPDC1-201ENST00000288976 INAFM1C9JVW0 142 aa6.61□□□□□ -1.35
PTPDC1-201ENST00000288976 SFTA3P0C7M3 94 aa6.61□□□□□ -1.35
PTPDC1-201ENST00000288976 WT1-ASQ06250 92 aa6.61□□□□□ -1.35
PTPDC1-201ENST00000288976 FAM162BQ5T6X4 162 aa6.61□□□□□ -1.35
PTPDC1-201ENST00000288976 ASPHD1Q5U4P2 390 aa6.61□□□□□ -1.35
PTPDC1-201ENST00000288976 KIR2DL4Q99706 377 aa6.61□□□□□ -1.35
PTPDC1-201ENST00000288976 RBFOX3A6NFN3 312 aa6.61□□□□□ -1.35
PTPDC1-201ENST00000288976 ATP6V0E1O15342 81 aa6.61□□□□□ -1.35
PTPDC1-201ENST00000288976 TMEM50AO95807 157 aa6.61□□□□□ -1.35
PTPDC1-201ENST00000288976 VAMP3Q15836 100 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms