RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 ARMS2P0C7Q2 107 aa12.69□□□□□ -0.38
SMAD6-201ENST00000288840 LINC00614P0C842 121 aa12.69□□□□□ -0.38
SMAD6-201ENST00000288840 NMUP48645 174 aa12.69□□□□□ -0.38
SMAD6-201ENST00000288840 TCF15Q12870 199 aa12.69□□□□□ -0.38
SMAD6-201ENST00000288840 MYO18BQ8IUG5 2567 aa12.69□□□□□ -0.38
SMAD6-201ENST00000288840 WNK1Q9H4A3 2382 aa12.69□□□□□ -0.38
SMAD6-201ENST00000288840 LY6EQ16553 131 aa12.68□□□□□ -0.38
SMAD6-201ENST00000288840 TRGV9Q99603 122 aa12.68□□□□□ -0.38
SMAD6-201ENST00000288840 FNDC10F2Z333 226 aa12.68□□□□□ -0.38
SMAD6-201ENST00000288840 NCR2O95944 276 aa12.68□□□□□ -0.38
SMAD6-201ENST00000288840 NPSP0C0P6 89 aa12.68□□□□□ -0.38
SMAD6-201ENST00000288840 ARL3P36405 182 aa12.68□□□□□ -0.38
SMAD6-201ENST00000288840 ARPC1AQ92747 370 aa12.68□□□□□ -0.38
SMAD6-201ENST00000288840 TMEM208Q9BTX3 173 aa12.68□□□□□ -0.38
SMAD6-201ENST00000288840 TP73-AS1Q9UF72 201 aa12.68□□□□□ -0.38
SMAD6-201ENST00000288840 SMIM15Q7Z3B0 74 aa12.68□□□□□ -0.38
SMAD6-201ENST00000288840 VKORC1Q9BQB6 163 aa12.68□□□□□ -0.38
SMAD6-201ENST00000288840 DEFB104AQ8WTQ1 72 aa12.67□□□□□ -0.38
SMAD6-201ENST00000288840 OTORQ9NRC9 128 aa12.67□□□□□ -0.38
SMAD6-201ENST00000288840 SMIM27A0A1W2PRY6 76 aa12.67□□□□□ -0.38
SMAD6-201ENST00000288840 SMKR1H3BMG3 65 aa12.67□□□□□ -0.38
SMAD6-201ENST00000288840 S100A4P26447 101 aaKnown RBP12.67□□□□□ -0.38
SMAD6-201ENST00000288840 TM4SF20Q53R12 229 aa12.67□□□□□ -0.38
SMAD6-201ENST00000288840 SAPCD1Q5SSQ6 148 aa12.67□□□□□ -0.38
SMAD6-201ENST00000288840 LINC00173Q6ZV60 143 aa12.67□□□□□ -0.38
SMAD6-201ENST00000288840 CLEC19AQ6UXS0 136 aa12.67□□□□□ -0.38
SMAD6-201ENST00000288840 LINC00322Q6ZN03 302 aaPredicted RBP12.67□□□□□ -0.38
SMAD6-201ENST00000288840 POLQO75417 2590 aa12.66□□□□□ -0.38
SMAD6-201ENST00000288840 SONP18583 2426 aaKnown RBP12.66□□□□□ -0.38
SMAD6-201ENST00000288840 A0A1B0GWJ7 208 aa12.66□□□□□ -0.38
SMAD6-201ENST00000288840 TMEM219Q86XT9 240 aa12.66□□□□□ -0.38
SMAD6-201ENST00000288840 IGLV2-8P01709 118 aa12.66□□□□□ -0.38
SMAD6-201ENST00000288840 Q8NA96 180 aa12.66□□□□□ -0.38
SMAD6-201ENST00000288840 IGKV1D-37A0A075B6S9 117 aa12.66□□□□□ -0.38
SMAD6-201ENST00000288840 RAB37Q96AX2 223 aa12.66□□□□□ -0.38
SMAD6-201ENST00000288840 C8orf49Q96NF6 230 aa12.66□□□□□ -0.38
SMAD6-201ENST00000288840 HSPB8Q9UJY1 196 aa12.66□□□□□ -0.38
SMAD6-201ENST00000288840 IGLV2-23P01705 113 aa12.65□□□□□ -0.38
SMAD6-201ENST00000288840 NCOR1P1Q9H4R4 102 aa12.65□□□□□ -0.38
SMAD6-201ENST00000288840 PPP1R14DQ9NXH3 145 aa12.65□□□□□ -0.38
SMAD6-201ENST00000288840 IGLC1P0CG04 106 aa12.65□□□□□ -0.38
SMAD6-201ENST00000288840 ALKBH7Q9BT30 221 aaPredicted RBP12.65□□□□□ -0.38
SMAD6-201ENST00000288840 KLK15Q9H2R5 256 aa12.65□□□□□ -0.38
SMAD6-201ENST00000288840 CCDC144NLQ6NUI1 221 aa12.65□□□□□ -0.38
SMAD6-201ENST00000288840 SLC25A34Q6PIV7 304 aa12.65□□□□□ -0.38
SMAD6-201ENST00000288840 RABAC1Q9UI14 185 aa12.65□□□□□ -0.38
SMAD6-201ENST00000288840 TRAV9-2A0A087WT02 112 aa12.64□□□□□ -0.39
SMAD6-201ENST00000288840 SCGB2A2Q13296 93 aa12.64□□□□□ -0.39
SMAD6-201ENST00000288840 DNLZQ5SXM8 178 aa12.64□□□□□ -0.39
SMAD6-201ENST00000288840 IGF2BP2-AS1Q96M15 143 aa12.64□□□□□ -0.39
SMAD6-201ENST00000288840 NAA38Q9BRA0 125 aaKnown RBP12.64□□□□□ -0.39
SMAD6-201ENST00000288840 TMEM213A2RRL7 107 aa12.64□□□□□ -0.39
SMAD6-201ENST00000288840 DLEU1O43261 78 aa12.64□□□□□ -0.39
SMAD6-201ENST00000288840 HLA-DMBP28068 263 aa12.64□□□□□ -0.39
SMAD6-201ENST00000288840 CHODLQ9H9P2 273 aa12.64□□□□□ -0.39
SMAD6-201ENST00000288840 RPL7P18124 248 aaKnown RBP12.64□□□□□ -0.39
SMAD6-201ENST00000288840 EVI2AP22794 236 aa12.64□□□□□ -0.39
SMAD6-201ENST00000288840 Q86TA4 180 aa12.64□□□□□ -0.39
SMAD6-201ENST00000288840 ZNF738Q8NE65 137 aa12.64□□□□□ -0.39
SMAD6-201ENST00000288840 GDF5OSQ5U4N7 250 aa12.63□□□□□ -0.39
SMAD6-201ENST00000288840 EBLN2Q6P2I7 272 aa12.63□□□□□ -0.39
SMAD6-201ENST00000288840 AMN1Q8IY45 258 aa12.63□□□□□ -0.39
SMAD6-201ENST00000288840 TMEM75Q8N9X5 138 aa12.63□□□□□ -0.39
SMAD6-201ENST00000288840 C1RLQ9NZP8 487 aa12.63□□□□□ -0.39
SMAD6-201ENST00000288840 FAM106CPP0CH98 169 aa12.63□□□□□ -0.39
SMAD6-201ENST00000288840 LYZL1Q6UWQ5 148 aa12.63□□□□□ -0.39
SMAD6-201ENST00000288840 PRELID3AQ96N28 172 aa12.63□□□□□ -0.39
SMAD6-201ENST00000288840 CENPEQ02224 2701 aa12.63□□□□□ -0.39
SMAD6-201ENST00000288840 CIDEAO60543 219 aa12.63□□□□□ -0.39
SMAD6-201ENST00000288840 GOSR1O95249 250 aa12.63□□□□□ -0.39
SMAD6-201ENST00000288840 TOMM40O96008 361 aa12.63□□□□□ -0.39
SMAD6-201ENST00000288840 IGHV3-11P01762 117 aa12.63□□□□□ -0.39
SMAD6-201ENST00000288840 IGLL1P15814 213 aa12.63□□□□□ -0.39
SMAD6-201ENST00000288840 STPG4Q8N801 248 aa12.63□□□□□ -0.39
SMAD6-201ENST00000288840 NDPQ00604 133 aa12.62□□□□□ -0.39
SMAD6-201ENST00000288840 MPV17L2Q567V2 206 aa12.62□□□□□ -0.39
SMAD6-201ENST00000288840 TEX43Q6ZNM6 134 aa12.62□□□□□ -0.39
SMAD6-201ENST00000288840 VMO1Q7Z5L0 202 aa12.62□□□□□ -0.39
SMAD6-201ENST00000288840 C20orf144Q9BQM9 153 aa12.62□□□□□ -0.39
SMAD6-201ENST00000288840 IGLC2P0DOY2 106 aa12.62□□□□□ -0.39
SMAD6-201ENST00000288840 IGLC3P0DOY3 106 aa12.62□□□□□ -0.39
SMAD6-201ENST00000288840 LINC00310P59036 64 aa12.62□□□□□ -0.39
SMAD6-201ENST00000288840 C5orf64Q2M2E5 130 aa12.62□□□□□ -0.39
SMAD6-201ENST00000288840 OR10AG1Q8NH19 301 aa12.62□□□□□ -0.39
SMAD6-201ENST00000288840 D6R8Y8 96 aa12.62□□□□□ -0.39
SMAD6-201ENST00000288840 BCL6BQ8N143 479 aaPredicted RBP12.62□□□□□ -0.39
SMAD6-201ENST00000288840 ZC2HC1AQ96GY0 325 aa12.62□□□□□ -0.39
SMAD6-201ENST00000288840 IGKV1-17P01599 117 aa12.61□□□□□ -0.39
SMAD6-201ENST00000288840 Q71RC1 249 aaPredicted RBP12.61□□□□□ -0.39
SMAD6-201ENST00000288840 GTSF1Q8WW33 167 aa12.61□□□□□ -0.39
SMAD6-201ENST00000288840 A0A087X0K7 114 aa12.61□□□□□ -0.39
SMAD6-201ENST00000288840 KIR2DL5BA0A0G2JN68 375 aa12.61□□□□□ -0.39
SMAD6-201ENST00000288840 KIR2DL5BA0A0G2JPC4 375 aa12.61□□□□□ -0.39
SMAD6-201ENST00000288840 NDUFB8O95169 186 aa12.61□□□□□ -0.39
SMAD6-201ENST00000288840 TSPOP30536 169 aa12.61□□□□□ -0.39
SMAD6-201ENST00000288840 C15orf32Q32M92 178 aa12.61□□□□□ -0.39
SMAD6-201ENST00000288840 KIR2DL5AQ8N109 375 aa12.61□□□□□ -0.39
SMAD6-201ENST00000288840 ZZEF1O43149 2961 aa12.61□□□□□ -0.39
SMAD6-201ENST00000288840 RHOGP84095 191 aa12.61□□□□□ -0.39
SMAD6-201ENST00000288840 ERCC8Q13216 396 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms