RNA–Protein interactions for RNA: ENST00000277541.6

NOTCH1-201, Transcript of notch 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH1, Length 9,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH1-201ENST00000277541 CD33P20138 364 aa11.18□□□□□ -0.62
NOTCH1-201ENST00000277541 RFNGQ9Y644 331 aa11.18□□□□□ -0.62
NOTCH1-201ENST00000277541 TRBV7-1A0A0A6YYK4 115 aa11.18□□□□□ -0.62
NOTCH1-201ENST00000277541 IGLV3-19P01714 112 aa11.18□□□□□ -0.62
NOTCH1-201ENST00000277541 IGHV3-11P01762 117 aa11.18□□□□□ -0.62
NOTCH1-201ENST00000277541 NPSP0C0P6 89 aa11.18□□□□□ -0.62
NOTCH1-201ENST00000277541 FXYD7P58549 80 aa11.18□□□□□ -0.62
NOTCH1-201ENST00000277541 A0A1B0GWJ7 208 aa11.18□□□□□ -0.62
NOTCH1-201ENST00000277541 SP9P0CG40 484 aa11.18□□□□□ -0.62
NOTCH1-201ENST00000277541 FAM27E3Q08E93 113 aa11.18□□□□□ -0.62
NOTCH1-201ENST00000277541 TRGV4A0A0C4DH28 118 aa11.18□□□□□ -0.62
NOTCH1-201ENST00000277541 A0A0U1RRA0 63 aa11.18□□□□□ -0.62
NOTCH1-201ENST00000277541 Q86TA4 180 aa11.18□□□□□ -0.62
NOTCH1-201ENST00000277541 C18orf32Q8TCD1 76 aa11.17□□□□□ -0.62
NOTCH1-201ENST00000277541 NABP1Q96AH0 204 aa11.17□□□□□ -0.62
NOTCH1-201ENST00000277541 IGHV2-5P01817 119 aa11.17□□□□□ -0.62
NOTCH1-201ENST00000277541 SPSB3Q6PJ21 355 aa11.17□□□□□ -0.62
NOTCH1-201ENST00000277541 PNRC2Q9NPJ4 139 aaKnown RBP11.17□□□□□ -0.62
NOTCH1-201ENST00000277541 LSM4Q9Y4Z0 139 aaKnown RBP11.17□□□□□ -0.62
NOTCH1-201ENST00000277541 SRRM5B3KS81 715 aa11.17□□□□□ -0.62
NOTCH1-201ENST00000277541 NTF4P34130 210 aa11.17□□□□□ -0.62
NOTCH1-201ENST00000277541 ERCC8Q13216 396 aa11.17□□□□□ -0.62
NOTCH1-201ENST00000277541 CHCHD5Q9BSY4 110 aa11.17□□□□□ -0.62
NOTCH1-201ENST00000277541 TIMM23O14925 209 aa11.16□□□□□ -0.62
NOTCH1-201ENST00000277541 LINC00477Q96M19 166 aa11.16□□□□□ -0.62
NOTCH1-201ENST00000277541 MST1LQ2TV78 715 aa11.16□□□□□ -0.62
NOTCH1-201ENST00000277541 IGHV2-26A0A0B4J1V2 119 aa11.16□□□□□ -0.62
NOTCH1-201ENST00000277541 STPG4Q8N801 248 aa11.16□□□□□ -0.62
NOTCH1-201ENST00000277541 MESP1Q9BRJ9 268 aa11.16□□□□□ -0.62
NOTCH1-201ENST00000277541 FLVCR1-AS1Q8TAF5 88 aa11.16□□□□□ -0.62
NOTCH1-201ENST00000277541 C7orf69Q9H7B7 122 aa11.16□□□□□ -0.62
NOTCH1-201ENST00000277541 C15orf62A8K5M9 175 aa11.16□□□□□ -0.62
NOTCH1-201ENST00000277541 SRRM4A7MD48 611 aaKnown RBP11.15□□□□□ -0.62
NOTCH1-201ENST00000277541 AMN1Q8IY45 258 aa11.15□□□□□ -0.62
NOTCH1-201ENST00000277541 A0A1W2PPM0 123 aa11.15□□□□□ -0.62
NOTCH1-201ENST00000277541 MRPL14Q6P1L8 145 aaKnown RBP11.15□□□□□ -0.62
NOTCH1-201ENST00000277541 Q6ZWC4 215 aa11.15□□□□□ -0.62
NOTCH1-201ENST00000277541 BMPERQ8N8U9 685 aa11.15□□□□□ -0.62
NOTCH1-201ENST00000277541 COX8AP10176 69 aa11.15□□□□□ -0.62
NOTCH1-201ENST00000277541 PRADC1Q9BSG0 188 aa11.15□□□□□ -0.62
NOTCH1-201ENST00000277541 CEP192Q8TEP8 1941 aa11.15□□□□□ -0.62
NOTCH1-201ENST00000277541 KIAA1671Q9BY89 1806 aa11.15□□□□□ -0.62
NOTCH1-201ENST00000277541 H0YJW9 148 aa11.15□□□□□ -0.62
NOTCH1-201ENST00000277541 ZNF474Q6S9Z5 364 aaPredicted RBP11.15□□□□□ -0.62
NOTCH1-201ENST00000277541 RNF5Q99942 180 aa11.15□□□□□ -0.62
NOTCH1-201ENST00000277541 RPUSD1Q9UJJ7 312 aaKnown RBP11.15□□□□□ -0.63
NOTCH1-201ENST00000277541 IGLC2P0DOY2 106 aa11.15□□□□□ -0.63
NOTCH1-201ENST00000277541 IGLC3P0DOY3 106 aa11.15□□□□□ -0.63
NOTCH1-201ENST00000277541 FOXF2Q12947 444 aa11.15□□□□□ -0.63
NOTCH1-201ENST00000277541 GAGE12HA6NDE8 117 aa11.14□□□□□ -0.63
NOTCH1-201ENST00000277541 TSSC4Q9Y5U2 329 aaPredicted RBP11.14□□□□□ -0.63
NOTCH1-201ENST00000277541 PCNX3Q9H6A9 2034 aa11.14□□□□□ -0.63
NOTCH1-201ENST00000277541 SMIM27A0A1W2PRY6 76 aa11.14□□□□□ -0.63
NOTCH1-201ENST00000277541 C9orf106Q8NAJ2 232 aa11.14□□□□□ -0.63
NOTCH1-201ENST00000277541 RNASE6Q93091 150 aaKnown RBP11.14□□□□□ -0.63
NOTCH1-201ENST00000277541 ARHGAP32A7KAX9 2087 aa11.14□□□□□ -0.63
NOTCH1-201ENST00000277541 IGHV1-24A0A0C4DH33 117 aa11.14□□□□□ -0.63
NOTCH1-201ENST00000277541 C2orf16Q68DN1 1984 aa11.14□□□□□ -0.63
NOTCH1-201ENST00000277541 C14orf178Q8N769 122 aaPredicted RBP11.14□□□□□ -0.63
NOTCH1-201ENST00000277541 TMEM141Q96I45 108 aa11.14□□□□□ -0.63
NOTCH1-201ENST00000277541 RCHY1Q96PM5 261 aa11.14□□□□□ -0.63
NOTCH1-201ENST00000277541 LCNL1Q6ZST4 164 aa11.14□□□□□ -0.63
NOTCH1-201ENST00000277541 C9orf139Q6ZV77 190 aa11.14□□□□□ -0.63
NOTCH1-201ENST00000277541 ZNF492Q9P255 531 aa11.14□□□□□ -0.63
NOTCH1-201ENST00000277541 ZNF415Q09FC8 603 aa11.13□□□□□ -0.63
NOTCH1-201ENST00000277541 TRAV3A0A0B4J244 114 aa11.13□□□□□ -0.63
NOTCH1-201ENST00000277541 LINC00473A8K010 186 aa11.13□□□□□ -0.63
NOTCH1-201ENST00000277541 OR11H6Q8NGC7 330 aa11.13□□□□□ -0.63
NOTCH1-201ENST00000277541 TRAV40A0A0B4J280 105 aa11.13□□□□□ -0.63
NOTCH1-201ENST00000277541 TFF1P04155 84 aa11.13□□□□□ -0.63
NOTCH1-201ENST00000277541 PRR31Q5SQ13 230 aa11.13□□□□□ -0.63
NOTCH1-201ENST00000277541 FGFBP3Q8TAT2 258 aa11.13□□□□□ -0.63
NOTCH1-201ENST00000277541 Q8TAT8 98 aa11.13□□□□□ -0.63
NOTCH1-201ENST00000277541 PRSS22Q9GZN4 317 aa11.13□□□□□ -0.63
NOTCH1-201ENST00000277541 IGHV1-18A0A0C4DH31 117 aa11.13□□□□□ -0.63
NOTCH1-201ENST00000277541 LILRA1O75019 489 aa11.13□□□□□ -0.63
NOTCH1-201ENST00000277541 VGLL1Q99990 258 aa11.13□□□□□ -0.63
NOTCH1-201ENST00000277541 SMKR1H3BMG3 65 aa11.13□□□□□ -0.63
NOTCH1-201ENST00000277541 LY6G5BQ8NDX9 201 aa11.13□□□□□ -0.63
NOTCH1-201ENST00000277541 IGHV1-8P0DP01 117 aa11.13□□□□□ -0.63
NOTCH1-201ENST00000277541 SLAQ13239 276 aa11.13□□□□□ -0.63
NOTCH1-201ENST00000277541 SRSF8Q9BRL6 282 aaKnown RBP11.13□□□□□ -0.63
NOTCH1-201ENST00000277541 TRAV41A0A0B4J266 112 aa11.12□□□□□ -0.63
NOTCH1-201ENST00000277541 CDK2AP2O75956 126 aa11.12□□□□□ -0.63
NOTCH1-201ENST00000277541 TRACP01848 142 aa11.12□□□□□ -0.63
NOTCH1-201ENST00000277541 BOD1L2Q8IYS8 172 aa11.12□□□□□ -0.63
NOTCH1-201ENST00000277541 CITED2Q99967 270 aaPredicted RBP11.12□□□□□ -0.63
NOTCH1-201ENST00000277541 ZNF876PQ49A33 203 aa11.12□□□□□ -0.63
NOTCH1-201ENST00000277541 NOTCH4Q99466 2003 aa11.12□□□□□ -0.63
NOTCH1-201ENST00000277541 A0A1B0GUS0 222 aa11.12□□□□□ -0.63
NOTCH1-201ENST00000277541 LOC102723996A0A087X1L8 192 aa11.12□□□□□ -0.63
NOTCH1-201ENST00000277541 AZU1P20160 251 aa11.12□□□□□ -0.63
NOTCH1-201ENST00000277541 LIME1Q9H400 295 aa11.12□□□□□ -0.63
NOTCH1-201ENST00000277541 GGNQ86UU5 652 aa11.12□□□□□ -0.63
NOTCH1-201ENST00000277541 IGHV1-3A0A0C4DH29 117 aa11.12□□□□□ -0.63
NOTCH1-201ENST00000277541 PRSS46E5RG02 174 aa11.12□□□□□ -0.63
NOTCH1-201ENST00000277541 CD24P25063 80 aa11.12□□□□□ -0.63
NOTCH1-201ENST00000277541 TMEM200BQ69YZ2 307 aa11.12□□□□□ -0.63
NOTCH1-201ENST00000277541 MALRD1Q5VYJ5 2156 aa11.12□□□□□ -0.63
NOTCH1-201ENST00000277541 CEND1Q8N111 149 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms