RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 GTSF1Q8WW33 167 aa10.22□□□□□ -0.77
C9orf3-201ENST00000277198 TXN2Q99757 166 aa10.22□□□□□ -0.77
C9orf3-201ENST00000277198 LPAR2Q9HBW0 351 aa10.22□□□□□ -0.77
C9orf3-201ENST00000277198 ZFP30Q9Y2G7 519 aa10.22□□□□□ -0.77
C9orf3-201ENST00000277198 NF1P21359 2839 aa10.22□□□□□ -0.77
C9orf3-201ENST00000277198 PPIAL4CA0A0B4J2A2 164 aa10.21□□□□□ -0.77
C9orf3-201ENST00000277198 C2orf70A6NJV1 201 aa10.21□□□□□ -0.77
C9orf3-201ENST00000277198 HAX1O00165 279 aa10.21□□□□□ -0.77
C9orf3-201ENST00000277198 NDUFS7O75251 213 aa10.21□□□□□ -0.77
C9orf3-201ENST00000277198 PPIAL4GP0DN37 164 aa10.21□□□□□ -0.77
C9orf3-201ENST00000277198 HNRNPA3P51991 378 aaKnown RBP10.21□□□□□ -0.77
C9orf3-201ENST00000277198 Q5PR19 223 aa10.21□□□□□ -0.77
C9orf3-201ENST00000277198 RNASEKQ6P5S7 137 aaKnown RBP10.21□□□□□ -0.77
C9orf3-201ENST00000277198 TCF24Q7RTU0 167 aa10.21□□□□□ -0.77
C9orf3-201ENST00000277198 SSBP4Q9BWG4 385 aaPredicted RBP10.21□□□□□ -0.77
C9orf3-201ENST00000277198 BEX4Q9NWD9 120 aaPredicted RBP10.21□□□□□ -0.77
C9orf3-201ENST00000277198 OR5AL1P0C617 328 aa10.21□□□□□ -0.78
C9orf3-201ENST00000277198 LINC00614P0C842 121 aa10.21□□□□□ -0.78
C9orf3-201ENST00000277198 G0S2P27469 103 aa10.21□□□□□ -0.78
C9orf3-201ENST00000277198 LYZP61626 148 aa10.21□□□□□ -0.78
C9orf3-201ENST00000277198 Q6ZN92 141 aa10.21□□□□□ -0.78
C9orf3-201ENST00000277198 BPIFA4PQ86YQ2 179 aa10.21□□□□□ -0.78
C9orf3-201ENST00000277198 TMEM75Q8N9X5 138 aa10.21□□□□□ -0.78
C9orf3-201ENST00000277198 SMR3AQ99954 134 aa10.21□□□□□ -0.78
C9orf3-201ENST00000277198 SHANK2-AS3Q9BTD1 123 aa10.21□□□□□ -0.78
C9orf3-201ENST00000277198 TMEM70Q9BUB7 260 aa10.21□□□□□ -0.78
C9orf3-201ENST00000277198 TMUB1Q9BVT8 246 aa10.21□□□□□ -0.78
C9orf3-201ENST00000277198 RPH3ALQ9UNE2 315 aa10.21□□□□□ -0.78
C9orf3-201ENST00000277198 LAMTOR2Q9Y2Q5 125 aa10.21□□□□□ -0.78
C9orf3-201ENST00000277198 A0A1B0GW15 77 aa10.2□□□□□ -0.78
C9orf3-201ENST00000277198 K7EQM0 130 aa10.2□□□□□ -0.78
C9orf3-201ENST00000277198 IGLV2-11P01706 119 aa10.2□□□□□ -0.78
C9orf3-201ENST00000277198 GPR6P46095 362 aaPredicted RBP10.2□□□□□ -0.78
C9orf3-201ENST00000277198 EBLN2Q6P2I7 272 aa10.2□□□□□ -0.78
C9orf3-201ENST00000277198 CIARTQ8N365 385 aaPredicted RBP10.2□□□□□ -0.78
C9orf3-201ENST00000277198 LY6G5BQ8NDX9 201 aa10.2□□□□□ -0.78
C9orf3-201ENST00000277198 WNT10AQ9GZT5 417 aa10.2□□□□□ -0.78
C9orf3-201ENST00000277198 FBXL15Q9H469 300 aa10.2□□□□□ -0.78
C9orf3-201ENST00000277198 GOLT1BQ9Y3E0 138 aa10.2□□□□□ -0.78
C9orf3-201ENST00000277198 TRBV19A0A075B6N1 114 aa10.19□□□□□ -0.78
C9orf3-201ENST00000277198 IGKV1-17P01599 117 aa10.19□□□□□ -0.78
C9orf3-201ENST00000277198 LIPFP07098 398 aa10.19□□□□□ -0.78
C9orf3-201ENST00000277198 ASPHD1Q5U4P2 390 aa10.19□□□□□ -0.78
C9orf3-201ENST00000277198 GATD1Q8NB37 220 aa10.19□□□□□ -0.78
C9orf3-201ENST00000277198 OR4F17Q8NGA8 305 aa10.19□□□□□ -0.78
C9orf3-201ENST00000277198 SGK494Q96LW2 274 aa10.19□□□□□ -0.78
C9orf3-201ENST00000277198 GSX1Q9H4S2 264 aaPredicted RBP10.19□□□□□ -0.78
C9orf3-201ENST00000277198 TLN2Q9Y4G6 2542 aa10.19□□□□□ -0.78
C9orf3-201ENST00000277198 TRAV30A0A087WSZ9 112 aa10.19□□□□□ -0.78
C9orf3-201ENST00000277198 PLGLAQ15195 96 aa10.19□□□□□ -0.78
C9orf3-201ENST00000277198 LEMD1Q68G75 181 aa10.19□□□□□ -0.78
C9orf3-201ENST00000277198 Q6AWC8 147 aa10.19□□□□□ -0.78
C9orf3-201ENST00000277198 MUC15Q8N387 334 aa10.19□□□□□ -0.78
C9orf3-201ENST00000277198 OR11H6Q8NGC7 330 aa10.19□□□□□ -0.78
C9orf3-201ENST00000277198 URB1-AS1Q96HZ7 61 aa10.19□□□□□ -0.78
C9orf3-201ENST00000277198 PGLYRP4Q96LB8 373 aa10.19□□□□□ -0.78
C9orf3-201ENST00000277198 CSPG4Q6UVK1 2322 aa10.19□□□□□ -0.78
C9orf3-201ENST00000277198 LOC102724200A0A096LPH7 203 aaPredicted RBP10.18□□□□□ -0.78
C9orf3-201ENST00000277198 IGHV3-21A0A0B4J1V1 117 aa10.18□□□□□ -0.78
C9orf3-201ENST00000277198 H3BRN7 92 aa10.18□□□□□ -0.78
C9orf3-201ENST00000277198 K7EIM0 57 aa10.18□□□□□ -0.78
C9orf3-201ENST00000277198 OVOL3O00110 214 aa10.18□□□□□ -0.78
C9orf3-201ENST00000277198 CHEK1O14757 476 aa10.18□□□□□ -0.78
C9orf3-201ENST00000277198 APOHP02749 345 aaPredicted RBP10.18□□□□□ -0.78
C9orf3-201ENST00000277198 TSPOP30536 169 aa10.18□□□□□ -0.78
C9orf3-201ENST00000277198 NPBQ8NG41 125 aa10.18□□□□□ -0.78
C9orf3-201ENST00000277198 Q96MF0 132 aa10.18□□□□□ -0.78
C9orf3-201ENST00000277198 ZNF48Q96MX3 618 aaPredicted RBP10.18□□□□□ -0.78
C9orf3-201ENST00000277198 RAB1BQ9H0U4 201 aa10.18□□□□□ -0.78
C9orf3-201ENST00000277198 NIPBLQ6KC79 2804 aaeCLIP10.18□□□□□ -0.78
C9orf3-201ENST00000277198 NAV3Q8IVL0 2385 aa10.18□□□□□ -0.78
C9orf3-201ENST00000277198 SERTM2A0A1B0GWG4 89 aa10.17□□□□□ -0.78
C9orf3-201ENST00000277198 CNIH1O95406 144 aa10.17□□□□□ -0.78
C9orf3-201ENST00000277198 APELAP0DMC3 54 aa10.17□□□□□ -0.78
C9orf3-201ENST00000277198 HTR1DP28221 377 aa10.17□□□□□ -0.78
C9orf3-201ENST00000277198 CEACAM3P40198 252 aa10.17□□□□□ -0.78
C9orf3-201ENST00000277198 ATP5J2P56134 94 aa10.17□□□□□ -0.78
C9orf3-201ENST00000277198 PDE6HQ13956 83 aa10.17□□□□□ -0.78
C9orf3-201ENST00000277198 LCN12Q6JVE5 192 aa10.17□□□□□ -0.78
C9orf3-201ENST00000277198 GOLT1AQ6ZVE7 132 aa10.17□□□□□ -0.78
C9orf3-201ENST00000277198 ARL6IP6Q8N6S5 226 aa10.17□□□□□ -0.78
C9orf3-201ENST00000277198 DPM3Q9P2X0 92 aa10.17□□□□□ -0.78
C9orf3-201ENST00000277198 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.17□□□□□ -0.78
C9orf3-201ENST00000277198 NBR2O15453 112 aa10.17□□□□□ -0.78
C9orf3-201ENST00000277198 NDUFA3O95167 84 aa10.17□□□□□ -0.78
C9orf3-201ENST00000277198 COX7A1P24310 79 aa10.17□□□□□ -0.78
C9orf3-201ENST00000277198 RIGQ13278 110 aa10.17□□□□□ -0.78
C9orf3-201ENST00000277198 BATFQ16520 125 aa10.17□□□□□ -0.78
C9orf3-201ENST00000277198 Q56UQ5 140 aa10.17□□□□□ -0.78
C9orf3-201ENST00000277198 FAM120AOSQ5T036 256 aa10.17□□□□□ -0.78
C9orf3-201ENST00000277198 Q71RC1 249 aaPredicted RBP10.17□□□□□ -0.78
C9orf3-201ENST00000277198 ZNF491Q8N8L2 437 aa10.17□□□□□ -0.78
C9orf3-201ENST00000277198 ST20Q9HBF5 79 aa10.17□□□□□ -0.78
C9orf3-201ENST00000277198 A0A1B0GUT8 65 aa10.16□□□□□ -0.78
C9orf3-201ENST00000277198 LEPROTL1O95214 131 aa10.16□□□□□ -0.78
C9orf3-201ENST00000277198 C11orf71Q6IPW1 123 aa10.16□□□□□ -0.78
C9orf3-201ENST00000277198 SIGLEC15Q6ZMC9 328 aa10.16□□□□□ -0.78
C9orf3-201ENST00000277198 LHFPL4Q7Z7J7 247 aa10.16□□□□□ -0.78
C9orf3-201ENST00000277198 PRNTQ86SH4 94 aa10.16□□□□□ -0.78
C9orf3-201ENST00000277198 DTX2Q86UW9 622 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms