RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 K7EQM0 130 aa7.4□□□□□ -1.22
TRIM55-201ENST00000276573 M0R3E3 92 aa7.4□□□□□ -1.22
TRIM55-201ENST00000276573 CA1P00915 261 aaPredicted RBP7.4□□□□□ -1.22
TRIM55-201ENST00000276573 IGHV4-59P01825 116 aa7.4□□□□□ -1.22
TRIM55-201ENST00000276573 CBLN1P23435 193 aa7.4□□□□□ -1.22
TRIM55-201ENST00000276573 IER3P46695 156 aa7.4□□□□□ -1.22
TRIM55-201ENST00000276573 MEOX2P50222 304 aa7.4□□□□□ -1.22
TRIM55-201ENST00000276573 TCL1AP56279 114 aa7.4□□□□□ -1.22
TRIM55-201ENST00000276573 Q86TA4 180 aa7.4□□□□□ -1.22
TRIM55-201ENST00000276573 TMEM75Q8N9X5 138 aa7.4□□□□□ -1.22
TRIM55-201ENST00000276573 C12orf57Q99622 126 aa7.4□□□□□ -1.22
TRIM55-201ENST00000276573 GNB1LQ9BYB4 327 aa7.4□□□□□ -1.22
TRIM55-201ENST00000276573 GPR61Q9BZJ8 451 aa7.4□□□□□ -1.22
TRIM55-201ENST00000276573 PSG8Q9UQ74 426 aa7.4□□□□□ -1.22
TRIM55-201ENST00000276573 ZFP30Q9Y2G7 519 aa7.4□□□□□ -1.22
TRIM55-201ENST00000276573 U3KQE9 123 aa7.4□□□□□ -1.22
TRIM55-201ENST00000276573 SPINK4O60575 86 aa7.4□□□□□ -1.23
TRIM55-201ENST00000276573 ZNF253O75346 499 aa7.4□□□□□ -1.23
TRIM55-201ENST00000276573 IGLV1-40P01703 118 aa7.4□□□□□ -1.23
TRIM55-201ENST00000276573 CSN1S1P47710 185 aa7.4□□□□□ -1.23
TRIM55-201ENST00000276573 PSG3Q16557 428 aa7.4□□□□□ -1.23
TRIM55-201ENST00000276573 COX19Q49B96 90 aa7.4□□□□□ -1.23
TRIM55-201ENST00000276573 Q96MF0 132 aa7.4□□□□□ -1.23
TRIM55-201ENST00000276573 KLK15Q9H2R5 256 aa7.4□□□□□ -1.23
TRIM55-201ENST00000276573 ZNF785A8K8V0 405 aa7.39□□□□□ -1.23
TRIM55-201ENST00000276573 J3QKU1 62 aa7.39□□□□□ -1.23
TRIM55-201ENST00000276573 PF4V1P10720 104 aa7.39□□□□□ -1.23
TRIM55-201ENST00000276573 PLA2G2AP14555 144 aa7.39□□□□□ -1.23
TRIM55-201ENST00000276573 ARL3P36405 182 aa7.39□□□□□ -1.23
TRIM55-201ENST00000276573 SLC35B1P78383 322 aa7.39□□□□□ -1.23
TRIM55-201ENST00000276573 C1orf194Q5T5A4 169 aa7.39□□□□□ -1.23
TRIM55-201ENST00000276573 C9orf139Q6ZV77 190 aa7.39□□□□□ -1.23
TRIM55-201ENST00000276573 KRTAP1-3Q8IUG1 177 aa7.39□□□□□ -1.23
TRIM55-201ENST00000276573 CIARTQ8N365 385 aaPredicted RBP7.39□□□□□ -1.23
TRIM55-201ENST00000276573 TSKUQ8WUA8 353 aa7.39□□□□□ -1.23
TRIM55-201ENST00000276573 DAZAP1Q96EP5 407 aaKnown RBP7.39□□□□□ -1.23
TRIM55-201ENST00000276573 METTL26Q96S19 204 aa7.39□□□□□ -1.23
TRIM55-201ENST00000276573 MRPL18Q9H0U6 180 aaKnown RBP7.39□□□□□ -1.23
TRIM55-201ENST00000276573 ZNF580Q9UK33 172 aa7.39□□□□□ -1.23
TRIM55-201ENST00000276573 A0A087X0K7 114 aa7.39□□□□□ -1.23
TRIM55-201ENST00000276573 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.39□□□□□ -1.23
TRIM55-201ENST00000276573 SERTM2A0A1B0GWG4 89 aa7.39□□□□□ -1.23
TRIM55-201ENST00000276573 IGHG4P01861 327 aa7.39□□□□□ -1.23
TRIM55-201ENST00000276573 APOHP02749 345 aaPredicted RBP7.39□□□□□ -1.23
TRIM55-201ENST00000276573 PRB4P10163 310 aaPredicted RBP7.39□□□□□ -1.23
TRIM55-201ENST00000276573 CFHR3Q02985 330 aa7.39□□□□□ -1.23
TRIM55-201ENST00000276573 PDZD11Q5EBL8 140 aa7.39□□□□□ -1.23
TRIM55-201ENST00000276573 CYB5R2Q6BCY4 276 aa7.39□□□□□ -1.23
TRIM55-201ENST00000276573 WDR73Q6P4I2 378 aa7.39□□□□□ -1.23
TRIM55-201ENST00000276573 Q6YL49 198 aa7.39□□□□□ -1.23
TRIM55-201ENST00000276573 TMEM136Q6ZRR5 245 aa7.39□□□□□ -1.23
TRIM55-201ENST00000276573 NUP35Q8NFH5 326 aa7.39□□□□□ -1.23
TRIM55-201ENST00000276573 OR5R1Q8NH85 324 aa7.39□□□□□ -1.23
TRIM55-201ENST00000276573 RPP21Q9H633 154 aaKnown RBP7.39□□□□□ -1.23
TRIM55-201ENST00000276573 ZNF331Q9NQX6 463 aaPredicted RBP7.39□□□□□ -1.23
TRIM55-201ENST00000276573 NAT8BQ9UHF3 227 aa7.39□□□□□ -1.23
TRIM55-201ENST00000276573 CHD6Q8TD26 2715 aa7.39□□□□□ -1.23
TRIM55-201ENST00000276573 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.38□□□□□ -1.23
TRIM55-201ENST00000276573 LRRK2Q5S007 2527 aa7.38□□□□□ -1.23
TRIM55-201ENST00000276573 A8MWL6 223 aa7.38□□□□□ -1.23
TRIM55-201ENST00000276573 SNURFLB1AK76 121 aa7.38□□□□□ -1.23
TRIM55-201ENST00000276573 ZNF207O43670 478 aaKnown RBP7.38□□□□□ -1.23
TRIM55-201ENST00000276573 P01737 135 aa7.38□□□□□ -1.23
TRIM55-201ENST00000276573 S100A2P29034 98 aa7.38□□□□□ -1.23
TRIM55-201ENST00000276573 CT83Q5H943 113 aa7.38□□□□□ -1.23
TRIM55-201ENST00000276573 IGFL4Q6B9Z1 124 aa7.38□□□□□ -1.23
TRIM55-201ENST00000276573 MRPL54Q6P161 138 aaKnown RBP7.38□□□□□ -1.23
TRIM55-201ENST00000276573 Q71RC1 249 aaPredicted RBP7.38□□□□□ -1.23
TRIM55-201ENST00000276573 PSMG3-AS1Q96PY0 264 aa7.38□□□□□ -1.23
TRIM55-201ENST00000276573 ANKRD17O75179 2603 aaKnown RBP7.38□□□□□ -1.23
TRIM55-201ENST00000276573 CELSR2Q9HCU4 2923 aa7.38□□□□□ -1.23
TRIM55-201ENST00000276573 CR1P17927 2039 aa7.37□□□□□ -1.23
TRIM55-201ENST00000276573 IGHV3-66A0A0C4DH42 116 aa7.37□□□□□ -1.23
TRIM55-201ENST00000276573 A0A0G2JLM5 398 aa7.37□□□□□ -1.23
TRIM55-201ENST00000276573 NPIPB6E9PJ23 425 aa7.37□□□□□ -1.23
TRIM55-201ENST00000276573 TRBV12-3P01733 135 aa7.37□□□□□ -1.23
TRIM55-201ENST00000276573 MT-ND6P03923 174 aa7.37□□□□□ -1.23
TRIM55-201ENST00000276573 SMIM6P0DI80 62 aa7.37□□□□□ -1.23
TRIM55-201ENST00000276573 HIST2H2BCQ6DN03 193 aa7.37□□□□□ -1.23
TRIM55-201ENST00000276573 LCN12Q6JVE5 192 aa7.37□□□□□ -1.23
TRIM55-201ENST00000276573 RASL11AQ6T310 242 aa7.37□□□□□ -1.23
TRIM55-201ENST00000276573 C16orf54Q6UWD8 224 aa7.37□□□□□ -1.23
TRIM55-201ENST00000276573 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.37□□□□□ -1.23
TRIM55-201ENST00000276573 OR4B1Q8NGF8 309 aa7.37□□□□□ -1.23
TRIM55-201ENST00000276573 ZC2HC1AQ96GY0 325 aa7.37□□□□□ -1.23
TRIM55-201ENST00000276573 NEU1Q99519 415 aa7.37□□□□□ -1.23
TRIM55-201ENST00000276573 IGHV3OR16-13A0A075B7E8 117 aa7.37□□□□□ -1.23
TRIM55-201ENST00000276573 IGHV3-49A0A0A0MS15 119 aa7.37□□□□□ -1.23
TRIM55-201ENST00000276573 IGHV3-74A0A0B4J1X5 117 aa7.37□□□□□ -1.23
TRIM55-201ENST00000276573 FBLL1A6NHQ2 334 aaKnown RBP7.37□□□□□ -1.23
TRIM55-201ENST00000276573 NDUFA4O00483 81 aa7.37□□□□□ -1.23
TRIM55-201ENST00000276573 CHEK1O14757 476 aa7.37□□□□□ -1.23
TRIM55-201ENST00000276573 IGHV3-11P01762 117 aa7.37□□□□□ -1.23
TRIM55-201ENST00000276573 FABP4P15090 132 aa7.37□□□□□ -1.23
TRIM55-201ENST00000276573 HLA-DMBP28068 263 aa7.37□□□□□ -1.23
TRIM55-201ENST00000276573 GBGT1Q8N5D6 347 aa7.37□□□□□ -1.23
TRIM55-201ENST00000276573 OR4X2Q8NGF9 303 aa7.37□□□□□ -1.23
TRIM55-201ENST00000276573 OR10D4PQ8NGN7 298 aa7.37□□□□□ -1.23
TRIM55-201ENST00000276573 WIPF2Q8TF74 440 aaPredicted RBP7.37□□□□□ -1.23
TRIM55-201ENST00000276573 ASCL2Q99929 193 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms