RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 HHLA3Q9XRX5 114 aa12.53□□□□□ -0.4
CTDSP1-201ENST00000273062 CEP250Q9BV73 2442 aa12.53□□□□□ -0.4
CTDSP1-201ENST00000273062 MYCNOSP40205 109 aa12.52□□□□□ -0.4
CTDSP1-201ENST00000273062 TBC1D28Q2M2D7 210 aa12.52□□□□□ -0.4
CTDSP1-201ENST00000273062 ZFAND6Q6FIF0 208 aa12.52□□□□□ -0.4
CTDSP1-201ENST00000273062 GTSCR1Q86UQ5 136 aa12.52□□□□□ -0.4
CTDSP1-201ENST00000273062 AJUBAQ96IF1 538 aa12.52□□□□□ -0.4
CTDSP1-201ENST00000273062 PGPA6NDG6 321 aa12.52□□□□□ -0.41
CTDSP1-201ENST00000273062 D6R8Y8 96 aa12.52□□□□□ -0.41
CTDSP1-201ENST00000273062 NDUFS7O75251 213 aa12.52□□□□□ -0.41
CTDSP1-201ENST00000273062 CT83Q5H943 113 aa12.52□□□□□ -0.41
CTDSP1-201ENST00000273062 PATE2Q6UY27 113 aa12.52□□□□□ -0.41
CTDSP1-201ENST00000273062 CACNA1GO43497 2377 aa12.52□□□□□ -0.41
CTDSP1-201ENST00000273062 GVINP1Q7Z2Y8 2422 aa12.51□□□□□ -0.41
CTDSP1-201ENST00000273062 MAPKAPK5-AS1Q8N8E1 139 aa12.51□□□□□ -0.41
CTDSP1-201ENST00000273062 TPPP3Q9BW30 176 aa12.51□□□□□ -0.41
CTDSP1-201ENST00000273062 MUC6Q6W4X9 2439 aa12.51□□□□□ -0.41
CTDSP1-201ENST00000273062 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.51□□□□□ -0.41
CTDSP1-201ENST00000273062 MPV17P39210 176 aa12.51□□□□□ -0.41
CTDSP1-201ENST00000273062 IGFL2Q6UWQ7 119 aa12.51□□□□□ -0.41
CTDSP1-201ENST00000273062 OR5AN1Q8NGI8 311 aa12.51□□□□□ -0.41
CTDSP1-201ENST00000273062 DAZAP1Q96EP5 407 aaKnown RBP12.51□□□□□ -0.41
CTDSP1-201ENST00000273062 BSNQ9UPA5 3926 aa12.5□□□□□ -0.41
CTDSP1-201ENST00000273062 ATMQ13315 3056 aa12.5□□□□□ -0.41
CTDSP1-201ENST00000273062 A0A087WX48 190 aa12.5□□□□□ -0.41
CTDSP1-201ENST00000273062 TM4SF5O14894 197 aa12.5□□□□□ -0.41
CTDSP1-201ENST00000273062 COL8A1P27658 744 aa12.5□□□□□ -0.41
CTDSP1-201ENST00000273062 ZNF826PQ6ZT77 177 aa12.5□□□□□ -0.41
CTDSP1-201ENST00000273062 TEX29Q8N6K0 151 aa12.5□□□□□ -0.41
CTDSP1-201ENST00000273062 GFRA4Q9GZZ7 299 aa12.5□□□□□ -0.41
CTDSP1-201ENST00000273062 ENY2Q9NPA8 101 aa12.5□□□□□ -0.41
CTDSP1-201ENST00000273062 GRPP07492 148 aa12.5□□□□□ -0.41
CTDSP1-201ENST00000273062 ATP5J2P56134 94 aa12.5□□□□□ -0.41
CTDSP1-201ENST00000273062 HSPE1P61604 102 aaKnown RBP12.5□□□□□ -0.41
CTDSP1-201ENST00000273062 PAX8Q06710 450 aa12.5□□□□□ -0.41
CTDSP1-201ENST00000273062 PRSS33Q8NF86 280 aa12.5□□□□□ -0.41
CTDSP1-201ENST00000273062 SMG1Q96Q15 3661 aaKnown RBP12.5□□□□□ -0.41
CTDSP1-201ENST00000273062 TRAV17A0A0B4J275 112 aa12.49□□□□□ -0.41
CTDSP1-201ENST00000273062 FCER1GP30273 86 aa12.49□□□□□ -0.41
CTDSP1-201ENST00000273062 ZNF134P52741 427 aa12.49□□□□□ -0.41
CTDSP1-201ENST00000273062 Q6ZT83 130 aa12.49□□□□□ -0.41
CTDSP1-201ENST00000273062 MOGAT3Q86VF5 341 aa12.49□□□□□ -0.41
CTDSP1-201ENST00000273062 PPDPFQ9H3Y8 114 aa12.49□□□□□ -0.41
CTDSP1-201ENST00000273062 TMEM14BQ9NUH8 114 aa12.49□□□□□ -0.41
CTDSP1-201ENST00000273062 KLF12Q9Y4X4 402 aa12.49□□□□□ -0.41
CTDSP1-201ENST00000273062 A0A1B0GUT8 65 aa12.49□□□□□ -0.41
CTDSP1-201ENST00000273062 FABP5P3A8MUU1 101 aa12.49□□□□□ -0.41
CTDSP1-201ENST00000273062 J3KRW8 73 aa12.49□□□□□ -0.41
CTDSP1-201ENST00000273062 FSTL3O95633 263 aa12.49□□□□□ -0.41
CTDSP1-201ENST00000273062 HBDP02042 147 aa12.49□□□□□ -0.41
CTDSP1-201ENST00000273062 TMSB15BA0A087X1C1 80 aa12.48□□□□□ -0.41
CTDSP1-201ENST00000273062 ZNF785A8K8V0 405 aa12.48□□□□□ -0.41
CTDSP1-201ENST00000273062 ARL3P36405 182 aa12.48□□□□□ -0.41
CTDSP1-201ENST00000273062 MORN3Q6PF18 240 aaPredicted RBP12.48□□□□□ -0.41
CTDSP1-201ENST00000273062 LEAP2Q969E1 77 aa12.48□□□□□ -0.41
CTDSP1-201ENST00000273062 FLYWCH2Q96CP2 140 aaKnown RBP12.48□□□□□ -0.41
CTDSP1-201ENST00000273062 CITED1Q99966 193 aa12.48□□□□□ -0.41
CTDSP1-201ENST00000273062 MRPL32Q9BYC8 188 aaKnown RBP12.48□□□□□ -0.41
CTDSP1-201ENST00000273062 YAE1D1Q9NRH1 226 aa12.48□□□□□ -0.41
CTDSP1-201ENST00000273062 INTS1Q8N201 2190 aaKnown RBP12.48□□□□□ -0.41
CTDSP1-201ENST00000273062 MAP1BP46821 2468 aaKnown RBP12.48□□□□□ -0.41
CTDSP1-201ENST00000273062 GAGE12JA6NER3 117 aa12.48□□□□□ -0.41
CTDSP1-201ENST00000273062 K7EM74 188 aa12.48□□□□□ -0.41
CTDSP1-201ENST00000273062 COX7A2P2O60397 106 aa12.48□□□□□ -0.41
CTDSP1-201ENST00000273062 GAGE7O76087 117 aa12.48□□□□□ -0.41
CTDSP1-201ENST00000273062 GAGE12FP0CL80 117 aa12.48□□□□□ -0.41
CTDSP1-201ENST00000273062 GAGE12GP0CL81 117 aa12.48□□□□□ -0.41
CTDSP1-201ENST00000273062 GAGE12IP0CL82 117 aa12.48□□□□□ -0.41
CTDSP1-201ENST00000273062 GAGE4Q13068 117 aa12.48□□□□□ -0.41
CTDSP1-201ENST00000273062 RP1L1Q8IWN7 2480 aaPredicted RBP12.47□□□□□ -0.41
CTDSP1-201ENST00000273062 SMKR1H3BMG3 65 aa12.47□□□□□ -0.41
CTDSP1-201ENST00000273062 SCGB2A1O75556 95 aa12.47□□□□□ -0.41
CTDSP1-201ENST00000273062 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.47□□□□□ -0.41
CTDSP1-201ENST00000273062 ATP6V0E2Q8NHE4 81 aa12.47□□□□□ -0.41
CTDSP1-201ENST00000273062 S1PR3Q99500 378 aa12.47□□□□□ -0.41
CTDSP1-201ENST00000273062 ZNF492Q9P255 531 aa12.47□□□□□ -0.41
CTDSP1-201ENST00000273062 DKK4Q9UBT3 224 aa12.47□□□□□ -0.41
CTDSP1-201ENST00000273062 DMXL2Q8TDJ6 3036 aa12.47□□□□□ -0.41
CTDSP1-201ENST00000273062 CT45A10P0DMU9 189 aa12.47□□□□□ -0.41
CTDSP1-201ENST00000273062 NDUFV3P56181 108 aaKnown RBP12.47□□□□□ -0.41
CTDSP1-201ENST00000273062 C10orf113Q5VZT2 155 aa12.47□□□□□ -0.41
CTDSP1-201ENST00000273062 KLF14Q8TD94 323 aaPredicted RBP12.47□□□□□ -0.41
CTDSP1-201ENST00000273062 FOXA2Q9Y261 457 aaPredicted RBP12.47□□□□□ -0.41
CTDSP1-201ENST00000273062 EDDM3AQ14507 147 aa12.46□□□□□ -0.41
CTDSP1-201ENST00000273062 SEM1Q6ZVN7 128 aa12.46□□□□□ -0.41
CTDSP1-201ENST00000273062 PDPNQ86YL7 162 aa12.46□□□□□ -0.41
CTDSP1-201ENST00000273062 AMN1Q8IY45 258 aa12.46□□□□□ -0.41
CTDSP1-201ENST00000273062 C3orf56Q8N813 242 aa12.46□□□□□ -0.41
CTDSP1-201ENST00000273062 SRSF12Q8WXF0 261 aaKnown RBP12.46□□□□□ -0.41
CTDSP1-201ENST00000273062 RTL8AQ9BWD3 113 aa12.46□□□□□ -0.41
CTDSP1-201ENST00000273062 ARFGEF3Q5TH69 2177 aa12.46□□□□□ -0.41
CTDSP1-201ENST00000273062 DLL1O00548 723 aa12.46□□□□□ -0.42
CTDSP1-201ENST00000273062 GNG12Q9UBI6 72 aa12.46□□□□□ -0.42
CTDSP1-201ENST00000273062 VPREB3Q9UKI3 123 aa12.46□□□□□ -0.42
CTDSP1-201ENST00000273062 C15orf65H3BRN8 121 aa12.45□□□□□ -0.42
CTDSP1-201ENST00000273062 ZC2HC1BQ5TFG8 222 aa12.45□□□□□ -0.42
CTDSP1-201ENST00000273062 ZFP2Q6ZN57 461 aa12.45□□□□□ -0.42
CTDSP1-201ENST00000273062 ANKRD11Q6UB99 2663 aaPredicted RBP12.45□□□□□ -0.42
CTDSP1-201ENST00000273062 TMEM213A2RRL7 107 aa12.45□□□□□ -0.42
CTDSP1-201ENST00000273062 M0QXV9 152 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms