RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 LINC00479Q96M42 142 aa12.54□□□□□ -0.4
TPM1-201ENST00000267996 K7EN84 100 aa12.53□□□□□ -0.4
TPM1-201ENST00000267996 ZNF207O43670 478 aaKnown RBP12.53□□□□□ -0.4
TPM1-201ENST00000267996 IGLV2-8P01709 118 aa12.53□□□□□ -0.4
TPM1-201ENST00000267996 S100A9P06702 114 aaKnown RBP12.53□□□□□ -0.4
TPM1-201ENST00000267996 LGALS1P09382 135 aaKnown RBP12.53□□□□□ -0.4
TPM1-201ENST00000267996 C16orf54Q6UWD8 224 aa12.53□□□□□ -0.4
TPM1-201ENST00000267996 KLHDC1Q8N7A1 406 aa12.53□□□□□ -0.4
TPM1-201ENST00000267996 ZNF418Q8TF45 676 aaPredicted RBP12.53□□□□□ -0.4
TPM1-201ENST00000267996 ANAPC16Q96DE5 110 aa12.53□□□□□ -0.4
TPM1-201ENST00000267996 AURKAIP1Q9NWT8 199 aaPredicted RBP12.53□□□□□ -0.4
TPM1-201ENST00000267996 ATF4P18848 351 aaPredicted RBP12.52□□□□□ -0.4
TPM1-201ENST00000267996 GALR1P47211 349 aa12.52□□□□□ -0.4
TPM1-201ENST00000267996 HILS1P60008 231 aa12.52□□□□□ -0.4
TPM1-201ENST00000267996 PSG9Q00887 426 aa12.52□□□□□ -0.4
TPM1-201ENST00000267996 ARL6IP6Q8N6S5 226 aa12.52□□□□□ -0.4
TPM1-201ENST00000267996 WIPF2Q8TF74 440 aaPredicted RBP12.52□□□□□ -0.4
TPM1-201ENST00000267996 GLMPQ8WWB7 406 aa12.52□□□□□ -0.4
TPM1-201ENST00000267996 OR5B12Q96R08 314 aa12.52□□□□□ -0.4
TPM1-201ENST00000267996 K7EMT4 169 aa12.51□□□□□ -0.41
TPM1-201ENST00000267996 ISLRO14498 428 aa12.51□□□□□ -0.41
TPM1-201ENST00000267996 CMTM2Q8TAZ6 248 aa12.51□□□□□ -0.41
TPM1-201ENST00000267996 IGHV3-49A0A0A0MS15 119 aa12.51□□□□□ -0.41
TPM1-201ENST00000267996 TRAV34A0A0B4J273 112 aa12.51□□□□□ -0.41
TPM1-201ENST00000267996 IGHV3-66A0A0C4DH42 116 aa12.51□□□□□ -0.41
TPM1-201ENST00000267996 TRBV6-1A0A0K0K1D8 114 aa12.51□□□□□ -0.41
TPM1-201ENST00000267996 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.51□□□□□ -0.41
TPM1-201ENST00000267996 SFRP2Q96HF1 295 aa12.51□□□□□ -0.41
TPM1-201ENST00000267996 C16orf95Q9H693 158 aa12.51□□□□□ -0.41
TPM1-201ENST00000267996 IGHV3OR16-13A0A075B7E8 117 aa12.5□□□□□ -0.41
TPM1-201ENST00000267996 IGHV3-74A0A0B4J1X5 117 aa12.5□□□□□ -0.41
TPM1-201ENST00000267996 H7BYZ3 331 aa12.5□□□□□ -0.41
TPM1-201ENST00000267996 PPP1R2P9O14990 202 aa12.5□□□□□ -0.41
TPM1-201ENST00000267996 GCGP01275 180 aa12.5□□□□□ -0.41
TPM1-201ENST00000267996 MEOX2P50222 304 aa12.5□□□□□ -0.41
TPM1-201ENST00000267996 FAM106AQ4KMX7 169 aa12.5□□□□□ -0.41
TPM1-201ENST00000267996 FAM24BQ8N5W8 94 aa12.5□□□□□ -0.41
TPM1-201ENST00000267996 SMIM12Q96EX1 92 aa12.5□□□□□ -0.41
TPM1-201ENST00000267996 FMC1Q96HJ9 113 aa12.5□□□□□ -0.41
TPM1-201ENST00000267996 AAMDCQ9H7C9 122 aa12.5□□□□□ -0.41
TPM1-201ENST00000267996 ZNF331Q9NQX6 463 aaPredicted RBP12.5□□□□□ -0.41
TPM1-201ENST00000267996 ZNF785A8K8V0 405 aa12.49□□□□□ -0.41
TPM1-201ENST00000267996 CDX1P47902 265 aaPredicted RBP12.49□□□□□ -0.41
TPM1-201ENST00000267996 ELOBQ15370 118 aa12.49□□□□□ -0.41
TPM1-201ENST00000267996 TCTEX1D4Q5JR98 221 aa12.49□□□□□ -0.41
TPM1-201ENST00000267996 BAGE2Q86Y30 109 aa12.49□□□□□ -0.41
TPM1-201ENST00000267996 DAZ1Q9NQZ3 744 aaKnown RBP12.49□□□□□ -0.41
TPM1-201ENST00000267996 RPH3ALQ9UNE2 315 aa12.49□□□□□ -0.41
TPM1-201ENST00000267996 IGHV7-4-1A0A0J9YVY3 117 aa12.48□□□□□ -0.41
TPM1-201ENST00000267996 A0A1W2PS18 150 aa12.48□□□□□ -0.41
TPM1-201ENST00000267996 ZNF320A2RRD8 509 aa12.48□□□□□ -0.41
TPM1-201ENST00000267996 DIRC3C9JPN6 131 aa12.48□□□□□ -0.41
TPM1-201ENST00000267996 M0R3E3 92 aa12.48□□□□□ -0.41
TPM1-201ENST00000267996 IGLV2-11P01706 119 aa12.48□□□□□ -0.41
TPM1-201ENST00000267996 CRYBA1P05813 215 aa12.48□□□□□ -0.41
TPM1-201ENST00000267996 PFN1P07737 140 aaKnown RBP12.48□□□□□ -0.41
TPM1-201ENST00000267996 UBE2G1P62253 170 aa12.48□□□□□ -0.41
TPM1-201ENST00000267996 GOLT1AQ6ZVE7 132 aa12.48□□□□□ -0.41
TPM1-201ENST00000267996 MLST8Q9BVC4 326 aa12.48□□□□□ -0.41
TPM1-201ENST00000267996 TMA7Q9Y2S6 64 aaKnown RBP12.48□□□□□ -0.41
TPM1-201ENST00000267996 SERTM2A0A1B0GWG4 89 aa12.48□□□□□ -0.41
TPM1-201ENST00000267996 LTAP01374 205 aa12.48□□□□□ -0.41
TPM1-201ENST00000267996 RPEL1Q2QD12 228 aa12.48□□□□□ -0.41
TPM1-201ENST00000267996 TM4SF20Q53R12 229 aa12.48□□□□□ -0.41
TPM1-201ENST00000267996 REC114Q7Z4M0 266 aa12.48□□□□□ -0.41
TPM1-201ENST00000267996 OR10G8Q8NGN5 311 aa12.48□□□□□ -0.41
TPM1-201ENST00000267996 GRAMD2BQ96HH9 432 aa12.48□□□□□ -0.41
TPM1-201ENST00000267996 SLC50A1Q9BRV3 221 aa12.48□□□□□ -0.41
TPM1-201ENST00000267996 SMPXQ9UHP9 88 aa12.48□□□□□ -0.41
TPM1-201ENST00000267996 IGHV4OR15-8A0A075B7B6 117 aa12.47□□□□□ -0.41
TPM1-201ENST00000267996 A0A087WW49 117 aa12.47□□□□□ -0.41
TPM1-201ENST00000267996 OR5I1Q13606 314 aa12.47□□□□□ -0.41
TPM1-201ENST00000267996 TMEM75Q8N9X5 138 aa12.47□□□□□ -0.41
TPM1-201ENST00000267996 WFDC12Q8WWY7 111 aa12.47□□□□□ -0.41
TPM1-201ENST00000267996 JMJD8Q96S16 334 aa12.47□□□□□ -0.41
TPM1-201ENST00000267996 OSTCQ9NRP0 149 aa12.47□□□□□ -0.41
TPM1-201ENST00000267996 UFC1Q9Y3C8 167 aa12.47□□□□□ -0.41
TPM1-201ENST00000267996 FLNBO75369 2602 aaKnown RBP12.46□□□□□ -0.41
TPM1-201ENST00000267996 HIVEP1P15822 2718 aa12.46□□□□□ -0.41
TPM1-201ENST00000267996 LGALS9O00182 355 aa12.46□□□□□ -0.41
TPM1-201ENST00000267996 CSN1S1P47710 185 aa12.46□□□□□ -0.41
TPM1-201ENST00000267996 Q86TA4 180 aa12.46□□□□□ -0.41
TPM1-201ENST00000267996 IMMP2LQ96T52 175 aa12.46□□□□□ -0.41
TPM1-201ENST00000267996 URGCP-MRPS24S4R325 110 aa12.46□□□□□ -0.41
TPM1-201ENST00000267996 TRBV24-1A0A075B6N3 115 aa12.45□□□□□ -0.42
TPM1-201ENST00000267996 A8MWP6 167 aa12.45□□□□□ -0.42
TPM1-201ENST00000267996 K7EQM0 130 aa12.45□□□□□ -0.42
TPM1-201ENST00000267996 CHEK1O14757 476 aa12.45□□□□□ -0.42
TPM1-201ENST00000267996 NDUFA7O95182 113 aa12.45□□□□□ -0.42
TPM1-201ENST00000267996 FOLR2P14207 255 aa12.45□□□□□ -0.42
TPM1-201ENST00000267996 RAB5AP20339 215 aa12.45□□□□□ -0.42
TPM1-201ENST00000267996 C8orf86Q6ZUL3 223 aa12.45□□□□□ -0.42
TPM1-201ENST00000267996 C4orf3Q8WVX3 66 aa12.45□□□□□ -0.42
TPM1-201ENST00000267996 SGK494Q96LW2 274 aa12.45□□□□□ -0.42
TPM1-201ENST00000267996 PYGO2Q9BRQ0 406 aa12.45□□□□□ -0.42
TPM1-201ENST00000267996 RHPN1-AS1Q9BWJ2 59 aa12.45□□□□□ -0.42
TPM1-201ENST00000267996 NF1P21359 2839 aa12.45□□□□□ -0.42
TPM1-201ENST00000267996 TRAV8-1A0A0A6YYK1 113 aa12.45□□□□□ -0.42
TPM1-201ENST00000267996 TRAV8-2A0A0B4J237 113 aa12.45□□□□□ -0.42
TPM1-201ENST00000267996 TMEM213A2RRL7 107 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms