RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 PRSS3P2Q8NHM4 247 aa13.29□□□□□ -0.28
SQLE-201ENST00000265896 TRGV9Q99603 122 aa13.29□□□□□ -0.28
SQLE-201ENST00000265896 CRYBG3Q68DQ2 2970 aa13.29□□□□□ -0.28
SQLE-201ENST00000265896 CRYABP02511 175 aaKnown RBP13.28□□□□□ -0.28
SQLE-201ENST00000265896 S100A7P31151 101 aa13.28□□□□□ -0.28
SQLE-201ENST00000265896 ATP5IP56385 69 aaPredicted RBP13.28□□□□□ -0.28
SQLE-201ENST00000265896 ETFRF1Q6IPR1 90 aa13.28□□□□□ -0.28
SQLE-201ENST00000265896 STXBP6Q8NFX7 210 aa13.28□□□□□ -0.28
SQLE-201ENST00000265896 PPIAL4CA0A0B4J2A2 164 aa13.28□□□□□ -0.28
SQLE-201ENST00000265896 IGHV3-66A0A0C4DH42 116 aa13.28□□□□□ -0.28
SQLE-201ENST00000265896 BUB1B-PAK6H3BSN5 160 aa13.28□□□□□ -0.28
SQLE-201ENST00000265896 CRYGCP07315 174 aa13.28□□□□□ -0.28
SQLE-201ENST00000265896 PPIAL4GP0DN37 164 aa13.28□□□□□ -0.28
SQLE-201ENST00000265896 PPIFP30405 207 aaKnown RBP13.28□□□□□ -0.28
SQLE-201ENST00000265896 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.27□□□□□ -0.28
SQLE-201ENST00000265896 SHISA9B4DS77 424 aa13.27□□□□□ -0.28
SQLE-201ENST00000265896 LGALS7P47929 136 aa13.27□□□□□ -0.28
SQLE-201ENST00000265896 AMN1Q8IY45 258 aa13.27□□□□□ -0.28
SQLE-201ENST00000265896 TMEM11P17152 192 aa13.27□□□□□ -0.29
SQLE-201ENST00000265896 UBE2V1Q13404 147 aa13.27□□□□□ -0.29
SQLE-201ENST00000265896 TM4SF20Q53R12 229 aa13.27□□□□□ -0.29
SQLE-201ENST00000265896 PRSS57Q6UWY2 283 aa13.27□□□□□ -0.29
SQLE-201ENST00000265896 CHRDL1Q9BU40 450 aa13.27□□□□□ -0.29
SQLE-201ENST00000265896 MAP1LC3CQ9BXW4 147 aa13.27□□□□□ -0.29
SQLE-201ENST00000265896 MRPS16Q9Y3D3 137 aaKnown RBP13.27□□□□□ -0.29
SQLE-201ENST00000265896 HSBP1L1C9JCN9 74 aa13.26□□□□□ -0.29
SQLE-201ENST00000265896 AMMECR1LQ6DCA0 310 aa13.26□□□□□ -0.29
SQLE-201ENST00000265896 NCBP2LA6PVI3 153 aaKnown RBP13.26□□□□□ -0.29
SQLE-201ENST00000265896 SLC25A34Q6PIV7 304 aa13.26□□□□□ -0.29
SQLE-201ENST00000265896 OR4A5Q8NH83 315 aa13.26□□□□□ -0.29
SQLE-201ENST00000265896 NGBQ9NPG2 151 aa13.26□□□□□ -0.29
SQLE-201ENST00000265896 IGHV3-49A0A0A0MS15 119 aa13.26□□□□□ -0.29
SQLE-201ENST00000265896 RASL11AQ6T310 242 aa13.26□□□□□ -0.29
SQLE-201ENST00000265896 ATP5L2Q7Z4Y8 100 aa13.26□□□□□ -0.29
SQLE-201ENST00000265896 C18orf15Q96N68 181 aa13.26□□□□□ -0.29
SQLE-201ENST00000265896 PSG8Q9UQ74 426 aa13.26□□□□□ -0.29
SQLE-201ENST00000265896 A0A1B0GUT8 65 aa13.25□□□□□ -0.29
SQLE-201ENST00000265896 D6R8Y8 96 aa13.25□□□□□ -0.29
SQLE-201ENST00000265896 I3L2K1 104 aa13.25□□□□□ -0.29
SQLE-201ENST00000265896 NEU4Q8WWR8 484 aaPredicted RBP13.25□□□□□ -0.29
SQLE-201ENST00000265896 GAS8-AS1O95177 125 aa13.25□□□□□ -0.29
SQLE-201ENST00000265896 IGFL3Q6UXB1 125 aa13.25□□□□□ -0.29
SQLE-201ENST00000265896 AP5S1Q9NUS5 200 aa13.25□□□□□ -0.29
SQLE-201ENST00000265896 TNFRSF13BO14836 293 aaPredicted RBP13.24□□□□□ -0.29
SQLE-201ENST00000265896 IGLV1-47P01700 117 aa13.24□□□□□ -0.29
SQLE-201ENST00000265896 HLA-DRB1P01911 266 aa13.24□□□□□ -0.29
SQLE-201ENST00000265896 Q8NA96 180 aa13.24□□□□□ -0.29
SQLE-201ENST00000265896 ORAOV1Q8WV07 137 aa13.24□□□□□ -0.29
SQLE-201ENST00000265896 CBY1Q9Y3M2 126 aa13.24□□□□□ -0.29
SQLE-201ENST00000265896 CELSR2Q9HCU4 2923 aa13.24□□□□□ -0.29
SQLE-201ENST00000265896 NPIPB5A8MRT5 1133 aa13.24□□□□□ -0.29
SQLE-201ENST00000265896 K7EIM0 57 aa13.24□□□□□ -0.29
SQLE-201ENST00000265896 LYZL1Q6UWQ5 148 aa13.24□□□□□ -0.29
SQLE-201ENST00000265896 FA2HQ7L5A8 372 aa13.24□□□□□ -0.29
SQLE-201ENST00000265896 MRPL52Q86TS9 123 aaKnown RBP13.24□□□□□ -0.29
SQLE-201ENST00000265896 TMEM191AQ9H0A3 160 aa13.24□□□□□ -0.29
SQLE-201ENST00000265896 OTORQ9NRC9 128 aa13.24□□□□□ -0.29
SQLE-201ENST00000265896 CSMD2Q7Z408 3487 aa13.24□□□□□ -0.29
SQLE-201ENST00000265896 OR5AL1P0C617 328 aa13.23□□□□□ -0.29
SQLE-201ENST00000265896 BVES-AS1Q5T3Y7 98 aa13.23□□□□□ -0.29
SQLE-201ENST00000265896 MSRB1Q9NZV6 116 aa13.23□□□□□ -0.29
SQLE-201ENST00000265896 TRBV19A0A075B6N1 114 aa13.23□□□□□ -0.29
SQLE-201ENST00000265896 TAX1BP3O14907 124 aa13.23□□□□□ -0.29
SQLE-201ENST00000265896 RNF125Q96EQ8 232 aa13.23□□□□□ -0.29
SQLE-201ENST00000265896 K7EMI3 77 aa13.23□□□□□ -0.29
SQLE-201ENST00000265896 GNG7O60262 68 aa13.23□□□□□ -0.29
SQLE-201ENST00000265896 BPIFA4PQ86YQ2 179 aa13.23□□□□□ -0.29
SQLE-201ENST00000265896 TTTY13Q9BZ97 58 aa13.23□□□□□ -0.29
SQLE-201ENST00000265896 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.22□□□□□ -0.296e-8■■■■□ 22
SQLE-201ENST00000265896 INS-IGF2F8WCM5 200 aa13.22□□□□□ -0.29
SQLE-201ENST00000265896 SIGLEC15Q6ZMC9 328 aa13.22□□□□□ -0.29
SQLE-201ENST00000265896 LINC00311Q8N616 119 aa13.22□□□□□ -0.29
SQLE-201ENST00000265896 ZNF491Q8N8L2 437 aa13.22□□□□□ -0.29
SQLE-201ENST00000265896 RAB37Q96AX2 223 aa13.22□□□□□ -0.29
SQLE-201ENST00000265896 CENPEQ02224 2701 aa13.22□□□□□ -0.29
SQLE-201ENST00000265896 LIPFP07098 398 aa13.22□□□□□ -0.29
SQLE-201ENST00000265896 CRYGBP07316 175 aa13.22□□□□□ -0.29
SQLE-201ENST00000265896 CDSNQ15517 529 aa13.21□□□□□ -0.29
SQLE-201ENST00000265896 ANKRD39Q53RE8 183 aa13.21□□□□□ -0.29
SQLE-201ENST00000265896 OVOL3O00110 214 aa13.21□□□□□ -0.29
SQLE-201ENST00000265896 RBX1P62877 108 aa13.21□□□□□ -0.29
SQLE-201ENST00000265896 NHLH1Q02575 133 aa13.21□□□□□ -0.29
SQLE-201ENST00000265896 TMEM30BQ3MIR4 351 aa13.21□□□□□ -0.29
SQLE-201ENST00000265896 SPRY2O43597 315 aa13.2□□□□□ -0.3
SQLE-201ENST00000265896 NDPQ00604 133 aa13.2□□□□□ -0.3
SQLE-201ENST00000265896 TRAV8-6A0A0B4J262 113 aa13.2□□□□□ -0.3
SQLE-201ENST00000265896 CACNG7P62955 275 aa13.2□□□□□ -0.3
SQLE-201ENST00000265896 EVI2AP22794 236 aa13.2□□□□□ -0.3
SQLE-201ENST00000265896 CHCHD1Q96BP2 118 aaKnown RBP13.2□□□□□ -0.3
SQLE-201ENST00000265896 VGLL1Q99990 258 aa13.2□□□□□ -0.3
SQLE-201ENST00000265896 SCNM1Q9BWG6 230 aa13.2□□□□□ -0.3
SQLE-201ENST00000265896 C1RLQ9NZP8 487 aa13.2□□□□□ -0.3
SQLE-201ENST00000265896 VSTM5A8MXK1 200 aa13.19□□□□□ -0.3
SQLE-201ENST00000265896 ZNF207O43670 478 aaKnown RBP13.19□□□□□ -0.3
SQLE-201ENST00000265896 RELQ04864 619 aaPredicted RBP13.19□□□□□ -0.3
SQLE-201ENST00000265896 SCRT2Q9NQ03 307 aa13.19□□□□□ -0.3
SQLE-201ENST00000265896 ZNF492Q9P255 531 aa13.19□□□□□ -0.3
SQLE-201ENST00000265896 K7EP13 123 aa13.19□□□□□ -0.3
SQLE-201ENST00000265896 CT45A10P0DMU9 189 aa13.19□□□□□ -0.3
SQLE-201ENST00000265896 GATA1P15976 413 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms