RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 ZNF586Q9NXT0 402 aa10.62□□□□□ -0.71
SSBP1-201ENST00000265304 SELENOKQ9Y6D0 94 aa10.62□□□□□ -0.71
SSBP1-201ENST00000265304 TRBV19A0A075B6N1 114 aa10.61□□□□□ -0.71
SSBP1-201ENST00000265304 TRAV8-2A0A0B4J237 113 aa10.61□□□□□ -0.71
SSBP1-201ENST00000265304 BOLA2-SMG1P6H3BVE0 249 aa10.61□□□□□ -0.71
SSBP1-201ENST00000265304 DNASE2O00115 360 aaPredicted RBP10.61□□□□□ -0.71
SSBP1-201ENST00000265304 NDUFB4O95168 129 aa10.61□□□□□ -0.71
SSBP1-201ENST00000265304 CD7P09564 240 aa10.61□□□□□ -0.71
SSBP1-201ENST00000265304 NBEAP1P0C6P0 100 aa10.61□□□□□ -0.71
SSBP1-201ENST00000265304 SULT1A2P50226 295 aa10.61□□□□□ -0.71
SSBP1-201ENST00000265304 RPL11P62913 178 aaKnown RBP10.61□□□□□ -0.71
SSBP1-201ENST00000265304 KHDC3LQ587J8 217 aa10.61□□□□□ -0.71
SSBP1-201ENST00000265304 GBGT1Q8N5D6 347 aa10.61□□□□□ -0.71
SSBP1-201ENST00000265304 RNF141Q8WVD5 230 aa10.61□□□□□ -0.71
SSBP1-201ENST00000265304 TMED6Q8WW62 240 aa10.61□□□□□ -0.71
SSBP1-201ENST00000265304 ZNF331Q9NQX6 463 aaPredicted RBP10.61□□□□□ -0.71
SSBP1-201ENST00000265304 AURKAIP1Q9NWT8 199 aaPredicted RBP10.61□□□□□ -0.71
SSBP1-201ENST00000265304 TRAV1-1A0A0B4J248 108 aa10.6□□□□□ -0.71
SSBP1-201ENST00000265304 ATF4P18848 351 aaPredicted RBP10.6□□□□□ -0.71
SSBP1-201ENST00000265304 FAM122CQ6P4D5 195 aa10.6□□□□□ -0.71
SSBP1-201ENST00000265304 LINC00322Q6ZN03 302 aaPredicted RBP10.6□□□□□ -0.71
SSBP1-201ENST00000265304 SSX7Q7RTT5 188 aa10.6□□□□□ -0.71
SSBP1-201ENST00000265304 GTSCR1Q86UQ5 136 aa10.6□□□□□ -0.71
SSBP1-201ENST00000265304 LYPD1Q8N2G4 141 aa10.6□□□□□ -0.71
SSBP1-201ENST00000265304 FAM24BQ8N5W8 94 aa10.6□□□□□ -0.71
SSBP1-201ENST00000265304 PRR25Q96S07 402 aa10.6□□□□□ -0.71
SSBP1-201ENST00000265304 SLC50A1Q9BRV3 221 aa10.6□□□□□ -0.71
SSBP1-201ENST00000265304 PAXXQ9BUH6 204 aa10.6□□□□□ -0.71
SSBP1-201ENST00000265304 MAP6D1Q9H9H5 199 aa10.6□□□□□ -0.71
SSBP1-201ENST00000265304 K7EIL1 84 aa10.59□□□□□ -0.71
SSBP1-201ENST00000265304 PYYP10082 97 aa10.59□□□□□ -0.71
SSBP1-201ENST00000265304 ID1P41134 155 aa10.59□□□□□ -0.71
SSBP1-201ENST00000265304 ARL6IP6Q8N6S5 226 aa10.59□□□□□ -0.71
SSBP1-201ENST00000265304 CLUHP3Q96NS8 147 aa10.59□□□□□ -0.71
SSBP1-201ENST00000265304 PRKDCP78527 4128 aaKnown RBP10.58□□□□□ -0.72
SSBP1-201ENST00000265304 IGKV3-7A0A075B6H7 116 aa10.58□□□□□ -0.72
SSBP1-201ENST00000265304 A8MTW9 85 aa10.58□□□□□ -0.72
SSBP1-201ENST00000265304 CXorf1O96002 111 aa10.58□□□□□ -0.72
SSBP1-201ENST00000265304 FHITP49789 147 aa10.58□□□□□ -0.72
SSBP1-201ENST00000265304 CD81P60033 236 aa10.58□□□□□ -0.72
SSBP1-201ENST00000265304 SNRPD3P62318 126 aaKnown RBP10.58□□□□□ -0.72
SSBP1-201ENST00000265304 PMS2P11Q13670 270 aa10.58□□□□□ -0.72
SSBP1-201ENST00000265304 MRPL53Q96EL3 112 aaKnown RBP10.58□□□□□ -0.72
SSBP1-201ENST00000265304 NBEAL2Q6ZNJ1 2754 aa10.58□□□□□ -0.72
SSBP1-201ENST00000265304 OR11H12B2RN74 326 aa10.57□□□□□ -0.72
SSBP1-201ENST00000265304 SLC17A3O00476 420 aa10.57□□□□□ -0.72
SSBP1-201ENST00000265304 OR7C2O60412 319 aa10.57□□□□□ -0.72
SSBP1-201ENST00000265304 ARL14EPLP0DKL9 152 aa10.57□□□□□ -0.72
SSBP1-201ENST00000265304 TFPI2P48307 235 aa10.57□□□□□ -0.72
SSBP1-201ENST00000265304 PSG9Q00887 426 aa10.57□□□□□ -0.72
SSBP1-201ENST00000265304 PSG3Q16557 428 aa10.57□□□□□ -0.72
SSBP1-201ENST00000265304 WFDC3Q8IUB2 231 aa10.57□□□□□ -0.72
SSBP1-201ENST00000265304 C16orf92Q96LL3 132 aa10.57□□□□□ -0.72
SSBP1-201ENST00000265304 CITED4Q96RK1 184 aa10.57□□□□□ -0.72
SSBP1-201ENST00000265304 PRELID1Q9Y255 219 aa10.57□□□□□ -0.72
SSBP1-201ENST00000265304 ZNF688P0C7X2 276 aa10.56□□□□□ -0.72
SSBP1-201ENST00000265304 GCHFRP30047 84 aa10.56□□□□□ -0.72
SSBP1-201ENST00000265304 DEFB131AP59861 70 aa10.56□□□□□ -0.72
SSBP1-201ENST00000265304 LYPD6BQ8NI32 183 aa10.56□□□□□ -0.72
SSBP1-201ENST00000265304 C20orf173Q96LM9 149 aa10.56□□□□□ -0.72
SSBP1-201ENST00000265304 TMEM167BQ9NRX6 74 aa10.56□□□□□ -0.72
SSBP1-201ENST00000265304 ARL2-SNX15V9GYD0 113 aa10.56□□□□□ -0.72
SSBP1-201ENST00000265304 OR10J4P0C629 311 aa10.55□□□□□ -0.72
SSBP1-201ENST00000265304 UBE2L3P68036 154 aaKnown RBP10.55□□□□□ -0.72
SSBP1-201ENST00000265304 TEX261Q6UWH6 196 aa10.55□□□□□ -0.72
SSBP1-201ENST00000265304 A0A1W2PRE2 83 aa10.54□□□□□ -0.72
SSBP1-201ENST00000265304 MAP1LC3B2A6NCE7 125 aa10.54□□□□□ -0.72
SSBP1-201ENST00000265304 HMGB3O15347 200 aaKnown RBP10.54□□□□□ -0.72
SSBP1-201ENST00000265304 EIF3GO75821 320 aaKnown RBP eCLIP10.54□□□□□ -0.727e-6■□□□□ 9.1
SSBP1-201ENST00000265304 H2AFB1P0C5Y9 115 aa10.54□□□□□ -0.72
SSBP1-201ENST00000265304 IGHV4-30-4P0DP06 118 aa10.54□□□□□ -0.72
SSBP1-201ENST00000265304 PSMG4Q5JS54 123 aa10.54□□□□□ -0.72
SSBP1-201ENST00000265304 FOXI2Q6ZQN5 318 aa10.54□□□□□ -0.72
SSBP1-201ENST00000265304 DEFB125Q8N687 156 aa10.54□□□□□ -0.72
SSBP1-201ENST00000265304 FAM213BQ8TBF2 198 aa10.54□□□□□ -0.72
SSBP1-201ENST00000265304 MAP1LC3BQ9GZQ8 125 aa10.54□□□□□ -0.72
SSBP1-201ENST00000265304 SAV1Q9H4B6 383 aaPredicted RBP10.54□□□□□ -0.72
SSBP1-201ENST00000265304 TENM3Q9P273 2699 aa10.54□□□□□ -0.72
SSBP1-201ENST00000265304 A0A0J9YX75 114 aa10.53□□□□□ -0.72
SSBP1-201ENST00000265304 H3BMM0 161 aa10.53□□□□□ -0.72
SSBP1-201ENST00000265304 PRB2P02812 416 aaPredicted RBP10.53□□□□□ -0.72
SSBP1-201ENST00000265304 HLA-DRB4P13762 266 aa10.53□□□□□ -0.72
SSBP1-201ENST00000265304 ALKAL2Q6UX46 152 aa10.53□□□□□ -0.72
SSBP1-201ENST00000265304 ZNF680Q8NEM1 530 aa10.53□□□□□ -0.72
SSBP1-201ENST00000265304 LRRC20Q8TCA0 184 aa10.53□□□□□ -0.72
SSBP1-201ENST00000265304 SFT2D1Q8WV19 159 aa10.53□□□□□ -0.72
SSBP1-201ENST00000265304 WFDC10AQ9H1F0 79 aa10.53□□□□□ -0.72
SSBP1-201ENST00000265304 OTORQ9NRC9 128 aa10.53□□□□□ -0.72
SSBP1-201ENST00000265304 UBQLN2Q9UHD9 624 aa10.53□□□□□ -0.72
SSBP1-201ENST00000265304 HLA-DRB4X5D2U9 266 aa10.53□□□□□ -0.72
SSBP1-201ENST00000265304 STAB2Q8WWQ8 2551 aa10.52□□□□□ -0.73
SSBP1-201ENST00000265304 KIR2DL5BA0A0G2JN68 375 aa10.52□□□□□ -0.73
SSBP1-201ENST00000265304 KIR2DL5BA0A0G2JPC4 375 aa10.52□□□□□ -0.73
SSBP1-201ENST00000265304 RBMY1BA6NDE4 496 aaKnown RBP10.52□□□□□ -0.73
SSBP1-201ENST00000265304 RBMY1EA6NEQ0 496 aaKnown RBP10.52□□□□□ -0.73
SSBP1-201ENST00000265304 H3BTX0 84 aa10.52□□□□□ -0.73
SSBP1-201ENST00000265304 SNRPCP09234 159 aaKnown RBP10.52□□□□□ -0.73
SSBP1-201ENST00000265304 RBMY1DP0C7P1 496 aaKnown RBP10.52□□□□□ -0.73
SSBP1-201ENST00000265304 DEFA6Q01524 100 aa10.52□□□□□ -0.73
SSBP1-201ENST00000265304 TRPT1Q86TN4 253 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms