RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 ASH1LQ9NR48 2969 aaKnown RBP9.83□□□□□ -0.84
CHMP3-201ENST00000263856 D6R8Y8 96 aa9.83□□□□□ -0.84
CHMP3-201ENST00000263856 K7EQM0 130 aa9.83□□□□□ -0.84
CHMP3-201ENST00000263856 THBDP07204 575 aa9.83□□□□□ -0.84
CHMP3-201ENST00000263856 NUP37Q8NFH4 326 aa9.83□□□□□ -0.84
CHMP3-201ENST00000263856 DCHS2Q6V1P9 2916 aa9.83□□□□□ -0.84
CHMP3-201ENST00000263856 CEP295Q9C0D2 2601 aa9.83□□□□□ -0.84
CHMP3-201ENST00000263856 IGHV2-70DA0A0C4DH43 119 aa9.83□□□□□ -0.84
CHMP3-201ENST00000263856 AMN1Q8IY45 258 aa9.83□□□□□ -0.84
CHMP3-201ENST00000263856 ZNF492Q9P255 531 aa9.83□□□□□ -0.84
CHMP3-201ENST00000263856 RALYQ9UKM9 306 aaKnown RBP9.83□□□□□ -0.84
CHMP3-201ENST00000263856 Q6ZS92 163 aa9.82□□□□□ -0.84
CHMP3-201ENST00000263856 C18orf15Q96N68 181 aa9.82□□□□□ -0.84
CHMP3-201ENST00000263856 AP1S3Q96PC3 154 aa9.82□□□□□ -0.84
CHMP3-201ENST00000263856 SCNM1Q9BWG6 230 aa9.82□□□□□ -0.84
CHMP3-201ENST00000263856 GNG7O60262 68 aa9.82□□□□□ -0.84
CHMP3-201ENST00000263856 GPR183P32249 361 aa9.82□□□□□ -0.84
CHMP3-201ENST00000263856 CSN1S1P47710 185 aa9.82□□□□□ -0.84
CHMP3-201ENST00000263856 C12orf54Q6X4T0 127 aa9.82□□□□□ -0.84
CHMP3-201ENST00000263856 Q8TAT8 98 aa9.82□□□□□ -0.84
CHMP3-201ENST00000263856 IGKV2-40A0A087WW87 121 aaPredicted RBP9.81□□□□□ -0.84
CHMP3-201ENST00000263856 IGKV2D-40P01614 121 aaPredicted RBP9.81□□□□□ -0.84
CHMP3-201ENST00000263856 CRYGCP07315 174 aa9.81□□□□□ -0.84
CHMP3-201ENST00000263856 NMUP48645 174 aa9.81□□□□□ -0.84
CHMP3-201ENST00000263856 PRR30Q53SZ7 412 aaPredicted RBP9.81□□□□□ -0.84
CHMP3-201ENST00000263856 SCRT2Q9NQ03 307 aa9.81□□□□□ -0.84
CHMP3-201ENST00000263856 SOX21Q9Y651 276 aaPredicted RBP9.81□□□□□ -0.84
CHMP3-201ENST00000263856 ANKHD1Q8IWZ3 2542 aaKnown RBP9.81□□□□□ -0.84
CHMP3-201ENST00000263856 PPIAL4CA0A0B4J2A2 164 aa9.81□□□□□ -0.84
CHMP3-201ENST00000263856 TEX22C9J3V5 150 aa9.81□□□□□ -0.84
CHMP3-201ENST00000263856 INS-IGF2F8WCM5 200 aa9.81□□□□□ -0.84
CHMP3-201ENST00000263856 TIMM23O14925 209 aa9.81□□□□□ -0.84
CHMP3-201ENST00000263856 PPIAL4GP0DN37 164 aa9.81□□□□□ -0.84
CHMP3-201ENST00000263856 CACNG7P62955 275 aa9.81□□□□□ -0.84
CHMP3-201ENST00000263856 PSG9Q00887 426 aa9.81□□□□□ -0.84
CHMP3-201ENST00000263856 LYZL1Q6UWQ5 148 aa9.81□□□□□ -0.84
CHMP3-201ENST00000263856 OR10AG1Q8NH19 301 aa9.81□□□□□ -0.84
CHMP3-201ENST00000263856 NDFIP1Q9BT67 221 aa9.81□□□□□ -0.84
CHMP3-201ENST00000263856 E7EQL1 145 aa9.81□□□□□ -0.84
CHMP3-201ENST00000263856 IGKV1-17P01599 117 aa9.81□□□□□ -0.84
CHMP3-201ENST00000263856 IGLV2-11P01706 119 aa9.81□□□□□ -0.84
CHMP3-201ENST00000263856 CT83Q5H943 113 aa9.81□□□□□ -0.84
CHMP3-201ENST00000263856 PET117Q6UWS5 81 aa9.81□□□□□ -0.84
CHMP3-201ENST00000263856 ASCL5Q7RTU5 278 aa9.81□□□□□ -0.84
CHMP3-201ENST00000263856 NEU4Q8WWR8 484 aaPredicted RBP9.81□□□□□ -0.84
CHMP3-201ENST00000263856 NCBP2LA6PVI3 153 aaKnown RBP9.8□□□□□ -0.84
CHMP3-201ENST00000263856 BUB1B-PAK6H3BSN5 160 aa9.8□□□□□ -0.84
CHMP3-201ENST00000263856 TMEM11P17152 192 aa9.8□□□□□ -0.84
CHMP3-201ENST00000263856 KLRD1Q13241 179 aa9.8□□□□□ -0.84
CHMP3-201ENST00000263856 PRSS57Q6UWY2 283 aa9.8□□□□□ -0.84
CHMP3-201ENST00000263856 LINC01560Q8TB33 94 aa9.8□□□□□ -0.84
CHMP3-201ENST00000263856 RNF125Q96EQ8 232 aa9.8□□□□□ -0.84
CHMP3-201ENST00000263856 AAMDCQ9H7C9 122 aa9.8□□□□□ -0.84
CHMP3-201ENST00000263856 BSNQ9UPA5 3926 aa9.8□□□□□ -0.84
CHMP3-201ENST00000263856 TRAV30A0A087WSZ9 112 aa9.8□□□□□ -0.84
CHMP3-201ENST00000263856 TRAV8-6A0A0B4J262 113 aa9.8□□□□□ -0.84
CHMP3-201ENST00000263856 HAX1O00165 279 aa9.8□□□□□ -0.84
CHMP3-201ENST00000263856 LINC00311Q8N616 119 aa9.8□□□□□ -0.84
CHMP3-201ENST00000263856 GFRA4Q9GZZ7 299 aa9.8□□□□□ -0.84
CHMP3-201ENST00000263856 THYN1Q9P016 225 aa9.8□□□□□ -0.84
CHMP3-201ENST00000263856 TRBV19A0A075B6N1 114 aa9.79□□□□□ -0.84
CHMP3-201ENST00000263856 C7orf71A4D174 169 aa9.79□□□□□ -0.84
CHMP3-201ENST00000263856 TMEM189A5PLL7 270 aa9.79□□□□□ -0.84
CHMP3-201ENST00000263856 ANKRD39Q53RE8 183 aa9.79□□□□□ -0.84
CHMP3-201ENST00000263856 PIP4P1Q86T03 277 aa9.79□□□□□ -0.84
CHMP3-201ENST00000263856 TMEM75Q8N9X5 138 aa9.79□□□□□ -0.84
CHMP3-201ENST00000263856 ABHD17AQ96GS6 310 aa9.79□□□□□ -0.84
CHMP3-201ENST00000263856 PRELID3AQ96N28 172 aa9.79□□□□□ -0.84
CHMP3-201ENST00000263856 IGHV3OR16-13A0A075B7E8 117 aa9.79□□□□□ -0.84
CHMP3-201ENST00000263856 IGHV3-74A0A0B4J1X5 117 aa9.79□□□□□ -0.84
CHMP3-201ENST00000263856 PPIFP30405 207 aaKnown RBP9.79□□□□□ -0.84
CHMP3-201ENST00000263856 DLX6P56179 175 aa9.79□□□□□ -0.84
CHMP3-201ENST00000263856 TWIST1Q15672 202 aa9.79□□□□□ -0.84
CHMP3-201ENST00000263856 SMIM12Q96EX1 92 aa9.79□□□□□ -0.84
CHMP3-201ENST00000263856 CRIP1P50238 77 aa9.79□□□□□ -0.84
CHMP3-201ENST00000263856 HIST1H1AQ02539 215 aaPredicted RBP9.79□□□□□ -0.84
CHMP3-201ENST00000263856 PSG3Q16557 428 aa9.79□□□□□ -0.84
CHMP3-201ENST00000263856 ZNF747Q9BV97 191 aa9.79□□□□□ -0.84
CHMP3-201ENST00000263856 CST9LQ9H4G1 147 aa9.79□□□□□ -0.84
CHMP3-201ENST00000263856 FAM90A27PA6NNH2 459 aa9.78□□□□□ -0.84
CHMP3-201ENST00000263856 NPIPB5A8MRT5 1133 aa9.78□□□□□ -0.84
CHMP3-201ENST00000263856 I3L2K1 104 aa9.78□□□□□ -0.84
CHMP3-201ENST00000263856 CRXO43186 299 aaPredicted RBP9.78□□□□□ -0.84
CHMP3-201ENST00000263856 HLA-DMBP28068 263 aa9.78□□□□□ -0.84
CHMP3-201ENST00000263856 C3orf36Q3SXR2 165 aa9.78□□□□□ -0.84
CHMP3-201ENST00000263856 FAM71F2Q6NXP2 309 aa9.78□□□□□ -0.84
CHMP3-201ENST00000263856 DEFB125Q8N687 156 aa9.78□□□□□ -0.84
CHMP3-201ENST00000263856 CEACAM4O75871 244 aa9.78□□□□□ -0.84
CHMP3-201ENST00000263856 SIGLEC15Q6ZMC9 328 aa9.78□□□□□ -0.84
CHMP3-201ENST00000263856 IGHV3-66A0A0C4DH42 116 aa9.77□□□□□ -0.84
CHMP3-201ENST00000263856 ZNF785A8K8V0 405 aa9.77□□□□□ -0.84
CHMP3-201ENST00000263856 CKS2P33552 79 aa9.77□□□□□ -0.84
CHMP3-201ENST00000263856 COTL1Q14019 142 aa9.77□□□□□ -0.84
CHMP3-201ENST00000263856 SHANK2-AS3Q9BTD1 123 aa9.77□□□□□ -0.84
CHMP3-201ENST00000263856 SIGLEC8Q9NYZ4 499 aa9.77□□□□□ -0.84
CHMP3-201ENST00000263856 H3BUT2 72 aa9.77□□□□□ -0.85
CHMP3-201ENST00000263856 K7EIM0 57 aa9.77□□□□□ -0.85
CHMP3-201ENST00000263856 ORM1P02763 201 aa9.77□□□□□ -0.85
CHMP3-201ENST00000263856 RHOGP84095 191 aa9.77□□□□□ -0.85
CHMP3-201ENST00000263856 ZNF491Q8N8L2 437 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms