RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.04□□□□□ -0.32
ZNF541-201ENST00000263351 SERTM2A0A1B0GWG4 89 aa13.04□□□□□ -0.32
ZNF541-201ENST00000263351 K7EIM0 57 aa13.04□□□□□ -0.32
ZNF541-201ENST00000263351 IL4P05112 153 aa13.04□□□□□ -0.32
ZNF541-201ENST00000263351 FCGR2BP31994 310 aaPredicted RBP13.04□□□□□ -0.32
ZNF541-201ENST00000263351 IFI27P40305 119 aaPredicted RBP13.04□□□□□ -0.32
ZNF541-201ENST00000263351 BVES-AS1Q5T3Y7 98 aa13.04□□□□□ -0.32
ZNF541-201ENST00000263351 PIP4P2Q8N4L2 257 aa13.04□□□□□ -0.32
ZNF541-201ENST00000263351 Q8NA96 180 aa13.04□□□□□ -0.32
ZNF541-201ENST00000263351 CHRDL1Q9BU40 450 aa13.04□□□□□ -0.32
ZNF541-201ENST00000263351 NPIPB6E9PJ23 425 aa13.03□□□□□ -0.32
ZNF541-201ENST00000263351 TIMM23O14925 209 aa13.03□□□□□ -0.32
ZNF541-201ENST00000263351 HLA-DMBP28068 263 aa13.03□□□□□ -0.32
ZNF541-201ENST00000263351 ETFRF1Q6IPR1 90 aa13.03□□□□□ -0.32
ZNF541-201ENST00000263351 Q8TAT8 98 aa13.03□□□□□ -0.32
ZNF541-201ENST00000263351 ZNF492Q9P255 531 aa13.03□□□□□ -0.32
ZNF541-201ENST00000263351 CRXO43186 299 aaPredicted RBP13.03□□□□□ -0.32
ZNF541-201ENST00000263351 CRYABP02511 175 aaKnown RBP13.03□□□□□ -0.32
ZNF541-201ENST00000263351 OR8A1Q8NGG7 326 aa13.03□□□□□ -0.32
ZNF541-201ENST00000263351 OTORQ9NRC9 128 aa13.03□□□□□ -0.32
ZNF541-201ENST00000263351 ONECUT1Q9UBC0 465 aa13.03□□□□□ -0.32
ZNF541-201ENST00000263351 SPTAN1Q13813 2472 aaKnown RBP13.03□□□□□ -0.32
ZNF541-201ENST00000263351 PRRG2O14669 202 aa13.02□□□□□ -0.32
ZNF541-201ENST00000263351 GAS8-AS1O95177 125 aa13.02□□□□□ -0.32
ZNF541-201ENST00000263351 GFRALQ6UXV0 394 aa13.02□□□□□ -0.32
ZNF541-201ENST00000263351 SIGLEC15Q6ZMC9 328 aa13.02□□□□□ -0.32
ZNF541-201ENST00000263351 TMEM75Q8N9X5 138 aa13.02□□□□□ -0.32
ZNF541-201ENST00000263351 RPEQ96AT9 228 aa13.02□□□□□ -0.32
ZNF541-201ENST00000263351 NGBQ9NPG2 151 aa13.02□□□□□ -0.32
ZNF541-201ENST00000263351 SCRT2Q9NQ03 307 aa13.02□□□□□ -0.32
ZNF541-201ENST00000263351 TRBV19A0A075B6N1 114 aa13.02□□□□□ -0.33
ZNF541-201ENST00000263351 IGKV2-40A0A087WW87 121 aaPredicted RBP13.02□□□□□ -0.33
ZNF541-201ENST00000263351 A0A096LNJ9 63 aa13.02□□□□□ -0.33
ZNF541-201ENST00000263351 IGKV2D-40P01614 121 aaPredicted RBP13.02□□□□□ -0.33
ZNF541-201ENST00000263351 UQCRFS1P47985 274 aa13.02□□□□□ -0.33
ZNF541-201ENST00000263351 PVRIGQ6DKI7 326 aa13.02□□□□□ -0.33
ZNF541-201ENST00000263351 AMN1Q8IY45 258 aa13.02□□□□□ -0.33
ZNF541-201ENST00000263351 OR4C5Q8NGB2 326 aa13.02□□□□□ -0.33
ZNF541-201ENST00000263351 PSG8Q9UQ74 426 aa13.02□□□□□ -0.33
ZNF541-201ENST00000263351 FAM71F2Q6NXP2 309 aa13.01□□□□□ -0.33
ZNF541-201ENST00000263351 SLC25A34Q6PIV7 304 aa13.01□□□□□ -0.33
ZNF541-201ENST00000263351 A0A1B0GUT8 65 aa13.01□□□□□ -0.33
ZNF541-201ENST00000263351 HLA-DRB1P01911 266 aa13.01□□□□□ -0.33
ZNF541-201ENST00000263351 ARF6P62330 175 aa13.01□□□□□ -0.33
ZNF541-201ENST00000263351 AMMECR1LQ6DCA0 310 aa13.01□□□□□ -0.33
ZNF541-201ENST00000263351 CHCHD1Q96BP2 118 aaKnown RBP13.01□□□□□ -0.33
ZNF541-201ENST00000263351 MAP1LC3CQ9BXW4 147 aa13.01□□□□□ -0.33
ZNF541-201ENST00000263351 PPIAL4CA0A0B4J2A2 164 aa13□□□□□ -0.33
ZNF541-201ENST00000263351 D6R8Y8 96 aa13□□□□□ -0.33
ZNF541-201ENST00000263351 HAX1O00165 279 aa13□□□□□ -0.33
ZNF541-201ENST00000263351 PPIAL4GP0DN37 164 aa13□□□□□ -0.33
ZNF541-201ENST00000263351 ANKRD39Q53RE8 183 aa13□□□□□ -0.33
ZNF541-201ENST00000263351 ZNF491Q8N8L2 437 aa13□□□□□ -0.33
ZNF541-201ENST00000263351 CBY1Q9Y3M2 126 aa13□□□□□ -0.33
ZNF541-201ENST00000263351 IGHV2-70DA0A0C4DH43 119 aa13□□□□□ -0.33
ZNF541-201ENST00000263351 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13□□□□□ -0.33
ZNF541-201ENST00000263351 CT83Q5H943 113 aa13□□□□□ -0.33
ZNF541-201ENST00000263351 NDFIP1Q9BT67 221 aa13□□□□□ -0.33
ZNF541-201ENST00000263351 PLP1P60201 277 aa12.99□□□□□ -0.33
ZNF541-201ENST00000263351 PRSS57Q6UWY2 283 aa12.99□□□□□ -0.33
ZNF541-201ENST00000263351 TRAV8-6A0A0B4J262 113 aa12.99□□□□□ -0.33
ZNF541-201ENST00000263351 LYZL1Q6UWQ5 148 aa12.99□□□□□ -0.33
ZNF541-201ENST00000263351 C2orf91Q6ZV80 131 aa12.99□□□□□ -0.33
ZNF541-201ENST00000263351 PRSS3P2Q8NHM4 247 aa12.99□□□□□ -0.33
ZNF541-201ENST00000263351 TMEM191AQ9H0A3 160 aa12.99□□□□□ -0.33
ZNF541-201ENST00000263351 ST20Q9HBF5 79 aa12.99□□□□□ -0.33
ZNF541-201ENST00000263351 AP5S1Q9NUS5 200 aa12.99□□□□□ -0.33
ZNF541-201ENST00000263351 LIPFP07098 398 aa12.98□□□□□ -0.33
ZNF541-201ENST00000263351 OR5AL1P0C617 328 aa12.98□□□□□ -0.33
ZNF541-201ENST00000263351 HOXB4P17483 251 aaPredicted RBP12.98□□□□□ -0.33
ZNF541-201ENST00000263351 NDPQ00604 133 aa12.98□□□□□ -0.33
ZNF541-201ENST00000263351 RNF125Q96EQ8 232 aa12.98□□□□□ -0.33
ZNF541-201ENST00000263351 SHANK2-AS3Q9BTD1 123 aa12.98□□□□□ -0.33
ZNF541-201ENST00000263351 ZNF747Q9BV97 191 aa12.98□□□□□ -0.33
ZNF541-201ENST00000263351 PPP1R14DQ9NXH3 145 aa12.98□□□□□ -0.33
ZNF541-201ENST00000263351 MSRB1Q9NZV6 116 aa12.98□□□□□ -0.33
ZNF541-201ENST00000263351 HES1Q14469 280 aa12.98□□□□□ -0.33
ZNF541-201ENST00000263351 CDSNQ15517 529 aa12.98□□□□□ -0.33
ZNF541-201ENST00000263351 ZNF414Q96IQ9 312 aa12.98□□□□□ -0.33
ZNF541-201ENST00000263351 C1RLQ9NZP8 487 aa12.98□□□□□ -0.33
ZNF541-201ENST00000263351 KAAG1Q9UBP8 84 aa12.98□□□□□ -0.33
ZNF541-201ENST00000263351 ZNF80P51504 273 aaPredicted RBP12.97□□□□□ -0.33
ZNF541-201ENST00000263351 C16orf54Q6UWD8 224 aa12.97□□□□□ -0.33
ZNF541-201ENST00000263351 C8orf31Q8N9H6 132 aa12.97□□□□□ -0.33
ZNF541-201ENST00000263351 GFRA4Q9GZZ7 299 aa12.97□□□□□ -0.33
ZNF541-201ENST00000263351 H3BRN7 92 aa12.97□□□□□ -0.33
ZNF541-201ENST00000263351 MRPS12O15235 138 aaKnown RBP12.97□□□□□ -0.33
ZNF541-201ENST00000263351 PPIFP30405 207 aaKnown RBP12.97□□□□□ -0.33
ZNF541-201ENST00000263351 RBPJQ06330 500 aa12.97□□□□□ -0.33
ZNF541-201ENST00000263351 PSG3Q16557 428 aa12.97□□□□□ -0.33
ZNF541-201ENST00000263351 BPIFA4PQ86YQ2 179 aa12.96□□□□□ -0.33
ZNF541-201ENST00000263351 SMIM12Q96EX1 92 aa12.96□□□□□ -0.33
ZNF541-201ENST00000263351 SIGLEC8Q9NYZ4 499 aa12.96□□□□□ -0.33
ZNF541-201ENST00000263351 IGHV3OR16-13A0A075B7E8 117 aa12.96□□□□□ -0.34
ZNF541-201ENST00000263351 IGHV3-74A0A0B4J1X5 117 aa12.96□□□□□ -0.34
ZNF541-201ENST00000263351 FAM90A27PA6NNH2 459 aa12.96□□□□□ -0.34
ZNF541-201ENST00000263351 HSBP1L1C9JCN9 74 aa12.96□□□□□ -0.34
ZNF541-201ENST00000263351 PSG9Q00887 426 aa12.96□□□□□ -0.34
ZNF541-201ENST00000263351 TM4SF20Q53R12 229 aa12.96□□□□□ -0.34
ZNF541-201ENST00000263351 DYNAPQ8N1N2 210 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms