RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 RAI1Q7Z5J4 1906 aaPredicted RBP11.92□□□□□ -0.5
XRCC1-201ENST00000262887 SLC25A17O43808 307 aa11.92□□□□□ -0.5
XRCC1-201ENST00000262887 GATA4P43694 442 aa11.92□□□□□ -0.5
XRCC1-201ENST00000262887 TNFAIP6P98066 277 aaPredicted RBP11.92□□□□□ -0.5
XRCC1-201ENST00000262887 ZNF414Q96IQ9 312 aa11.92□□□□□ -0.5
XRCC1-201ENST00000262887 TPSG1Q9NRR2 321 aa11.92□□□□□ -0.5
XRCC1-201ENST00000262887 PROCRQ9UNN8 238 aa11.92□□□□□ -0.5
XRCC1-201ENST00000262887 ARFGEF3Q5TH69 2177 aa11.92□□□□□ -0.5
XRCC1-201ENST00000262887 CEP295Q9C0D2 2601 aa11.92□□□□□ -0.5
XRCC1-201ENST00000262887 J3QR89 54 aa11.92□□□□□ -0.5
XRCC1-201ENST00000262887 IGHG3P01860 377 aa11.92□□□□□ -0.5
XRCC1-201ENST00000262887 DIAPH2-AS1Q14236 149 aa11.92□□□□□ -0.5
XRCC1-201ENST00000262887 DKK4Q9UBT3 224 aa11.92□□□□□ -0.5
XRCC1-201ENST00000262887 F11RQ9Y624 299 aaKnown RBP11.92□□□□□ -0.5
XRCC1-201ENST00000262887 ZNF785A8K8V0 405 aa11.91□□□□□ -0.5
XRCC1-201ENST00000262887 CRYGCP07315 174 aa11.91□□□□□ -0.5
XRCC1-201ENST00000262887 CCL3L1P16619 93 aa11.91□□□□□ -0.5
XRCC1-201ENST00000262887 GLRXP35754 106 aa11.91□□□□□ -0.5
XRCC1-201ENST00000262887 HIGD1AQ9Y241 93 aa11.91□□□□□ -0.5
XRCC1-201ENST00000262887 PRR33A8MZF0 331 aa11.91□□□□□ -0.5
XRCC1-201ENST00000262887 D6R8Y8 96 aa11.91□□□□□ -0.5
XRCC1-201ENST00000262887 IGLV2-23P01705 113 aa11.91□□□□□ -0.5
XRCC1-201ENST00000262887 APELAP0DMC3 54 aa11.91□□□□□ -0.5
XRCC1-201ENST00000262887 TM4SF20Q53R12 229 aa11.91□□□□□ -0.5
XRCC1-201ENST00000262887 SMG1Q96Q15 3661 aaKnown RBP11.91□□□□□ -0.5
XRCC1-201ENST00000262887 HOXB4P17483 251 aaPredicted RBP11.9□□□□□ -0.5
XRCC1-201ENST00000262887 LYZP61626 148 aa11.9□□□□□ -0.5
XRCC1-201ENST00000262887 VMA21Q3ZAQ7 101 aa11.9□□□□□ -0.5
XRCC1-201ENST00000262887 FOXI2Q6ZQN5 318 aa11.9□□□□□ -0.5
XRCC1-201ENST00000262887 MTURNQ8N3F0 131 aa11.9□□□□□ -0.5
XRCC1-201ENST00000262887 ASCL2Q99929 193 aa11.9□□□□□ -0.5
XRCC1-201ENST00000262887 HBDP02042 147 aa11.9□□□□□ -0.5
XRCC1-201ENST00000262887 FXYD7P58549 80 aa11.9□□□□□ -0.5
XRCC1-201ENST00000262887 Q6AWC8 147 aa11.9□□□□□ -0.5
XRCC1-201ENST00000262887 ZNF493Q6ZR52 646 aa11.9□□□□□ -0.5
XRCC1-201ENST00000262887 FAM169BQ8N8A8 192 aa11.9□□□□□ -0.5
XRCC1-201ENST00000262887 PRELID3AQ96N28 172 aa11.9□□□□□ -0.5
XRCC1-201ENST00000262887 TRBV6-1A0A0K0K1D8 114 aa11.89□□□□□ -0.51
XRCC1-201ENST00000262887 TNFRSF1AP19438 455 aa11.89□□□□□ -0.51
XRCC1-201ENST00000262887 FCGR2BP31994 310 aaPredicted RBP11.89□□□□□ -0.51
XRCC1-201ENST00000262887 IFI27L1Q96BM0 104 aa11.89□□□□□ -0.51
XRCC1-201ENST00000262887 IGLV3-9A0A075B6K5 115 aa11.89□□□□□ -0.51
XRCC1-201ENST00000262887 NKX2-8O15522 239 aa11.89□□□□□ -0.51
XRCC1-201ENST00000262887 LAMTOR5O43504 91 aa11.89□□□□□ -0.51
XRCC1-201ENST00000262887 CADP27708 2225 aa11.88□□□□□ -0.51
XRCC1-201ENST00000262887 IGHV1-46P01743 117 aa11.88□□□□□ -0.51
XRCC1-201ENST00000262887 GCSHP23434 173 aa11.88□□□□□ -0.51
XRCC1-201ENST00000262887 DHRS13Q6UX07 377 aa11.88□□□□□ -0.51
XRCC1-201ENST00000262887 U3KQK5 164 aa11.88□□□□□ -0.51
XRCC1-201ENST00000262887 PRB4P10163 310 aaPredicted RBP11.88□□□□□ -0.51
XRCC1-201ENST00000262887 SLC25A39Q9BZJ4 359 aaPredicted RBP11.88□□□□□ -0.51
XRCC1-201ENST00000262887 ORMDL3Q8N138 153 aa11.87□□□□□ -0.51
XRCC1-201ENST00000262887 BCL6BQ8N143 479 aaPredicted RBP11.87□□□□□ -0.51
XRCC1-201ENST00000262887 VGLL1Q99990 258 aa11.87□□□□□ -0.51
XRCC1-201ENST00000262887 TMEM14CQ9P0S9 112 aa11.87□□□□□ -0.51
XRCC1-201ENST00000262887 TSPAN13O95857 204 aa11.87□□□□□ -0.51
XRCC1-201ENST00000262887 CT45A10P0DMU9 189 aa11.87□□□□□ -0.51
XRCC1-201ENST00000262887 FXYD2P54710 66 aa11.87□□□□□ -0.51
XRCC1-201ENST00000262887 TMEM75Q8N9X5 138 aa11.87□□□□□ -0.51
XRCC1-201ENST00000262887 RITA1Q96K30 269 aa11.87□□□□□ -0.51
XRCC1-201ENST00000262887 OTOGLQ3ZCN5 2332 aa11.87□□□□□ -0.51
XRCC1-201ENST00000262887 FAM104BQ5XKR9 115 aa11.87□□□□□ -0.51
XRCC1-201ENST00000262887 AMN1Q8IY45 258 aa11.87□□□□□ -0.51
XRCC1-201ENST00000262887 ZNF479Q96JC4 524 aa11.87□□□□□ -0.51
XRCC1-201ENST00000262887 DKK2Q9UBU2 259 aa11.87□□□□□ -0.51
XRCC1-201ENST00000262887 ENSAO43768 121 aaKnown RBP11.86□□□□□ -0.51
XRCC1-201ENST00000262887 SPANXB1Q9NS25 103 aaPredicted RBP11.86□□□□□ -0.51
XRCC1-201ENST00000262887 PGPEP1Q9NXJ5 209 aa11.86□□□□□ -0.51
XRCC1-201ENST00000262887 PSG8Q9UQ74 426 aa11.86□□□□□ -0.51
XRCC1-201ENST00000262887 INTS1Q8N201 2190 aaKnown RBP11.86□□□□□ -0.51
XRCC1-201ENST00000262887 COL12A1Q99715 3063 aa11.86□□□□□ -0.51
XRCC1-201ENST00000262887 TMEM213A2RRL7 107 aa11.86□□□□□ -0.51
XRCC1-201ENST00000262887 FBLL1A6NHQ2 334 aaKnown RBP11.86□□□□□ -0.51
XRCC1-201ENST00000262887 NDUFS7O75251 213 aa11.86□□□□□ -0.51
XRCC1-201ENST00000262887 CRIP1P50238 77 aa11.86□□□□□ -0.51
XRCC1-201ENST00000262887 PAX8Q06710 450 aa11.86□□□□□ -0.51
XRCC1-201ENST00000262887 TEX36Q5VZQ5 186 aa11.86□□□□□ -0.51
XRCC1-201ENST00000262887 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.85□□□□□ -0.51
XRCC1-201ENST00000262887 RPL27AP46776 148 aaKnown RBP11.85□□□□□ -0.51
XRCC1-201ENST00000262887 MRGPRG-AS1Q2M3A8 158 aa11.85□□□□□ -0.51
XRCC1-201ENST00000262887 PVRIGQ6DKI7 326 aa11.85□□□□□ -0.51
XRCC1-201ENST00000262887 MRPL16Q9NX20 251 aaKnown RBP11.85□□□□□ -0.51
XRCC1-201ENST00000262887 HIGD1BQ9P298 99 aa11.85□□□□□ -0.51
XRCC1-201ENST00000262887 PLXNB1O43157 2135 aa11.85□□□□□ -0.51
XRCC1-201ENST00000262887 IGHV3-72A0A0B4J1Y9 119 aa11.85□□□□□ -0.51
XRCC1-201ENST00000262887 C19orf67A6NJJ6 358 aa11.85□□□□□ -0.51
XRCC1-201ENST00000262887 K7ERJ3 54 aa11.85□□□□□ -0.51
XRCC1-201ENST00000262887 TMEM200BQ69YZ2 307 aa11.85□□□□□ -0.51
XRCC1-201ENST00000262887 LYZL1Q6UWQ5 148 aa11.85□□□□□ -0.51
XRCC1-201ENST00000262887 MRPL51Q4U2R6 128 aaKnown RBP11.84□□□□□ -0.51
XRCC1-201ENST00000262887 C17orf77Q96MU5 243 aa11.84□□□□□ -0.51
XRCC1-201ENST00000262887 PIEZO2Q9H5I5 2752 aa11.84□□□□□ -0.51
XRCC1-201ENST00000262887 ICE1Q9Y2F5 2266 aa11.84□□□□□ -0.51
XRCC1-201ENST00000262887 TMSB15BA0A087X1C1 80 aa11.84□□□□□ -0.51
XRCC1-201ENST00000262887 OR11H12B2RN74 326 aa11.84□□□□□ -0.51
XRCC1-201ENST00000262887 WFDC3Q8IUB2 231 aa11.84□□□□□ -0.51
XRCC1-201ENST00000262887 OR11H1Q8NG94 326 aa11.84□□□□□ -0.51
XRCC1-201ENST00000262887 OR11H2Q8NH07 326 aa11.84□□□□□ -0.51
XRCC1-201ENST00000262887 PIFOQ8TCI5 191 aa11.84□□□□□ -0.51
XRCC1-201ENST00000262887 SPAG8Q99932 426 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 933.7 ms