RNA–Protein interactions for RNA: ENST00000262327.9

LIG3-201, Transcript of DNA ligase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIG3, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-201ENST00000262327 KLF17Q5JT82 389 aaPredicted RBP7.99□□□□□ -1.13
LIG3-201ENST00000262327 PPIAL4CA0A0B4J2A2 164 aa7.99□□□□□ -1.13
LIG3-201ENST00000262327 NUP37Q8NFH4 326 aa7.99□□□□□ -1.13
LIG3-201ENST00000262327 ATP6V0BQ99437 205 aa7.99□□□□□ -1.13
LIG3-201ENST00000262327 TMEM70Q9BUB7 260 aa7.99□□□□□ -1.13
LIG3-201ENST00000262327 MLST8Q9BVC4 326 aa7.99□□□□□ -1.13
LIG3-201ENST00000262327 TMSB15BA0A087X1C1 80 aa7.98□□□□□ -1.13
LIG3-201ENST00000262327 TRAV8-6A0A0B4J262 113 aa7.98□□□□□ -1.13
LIG3-201ENST00000262327 A8MWL6 223 aa7.98□□□□□ -1.13
LIG3-201ENST00000262327 RAB9AP51151 201 aa7.98□□□□□ -1.13
LIG3-201ENST00000262327 SMAGPQ0VAQ4 97 aa7.98□□□□□ -1.13
LIG3-201ENST00000262327 KLF5Q13887 457 aaPredicted RBP7.98□□□□□ -1.13
LIG3-201ENST00000262327 FAM120AOSQ5T036 256 aa7.98□□□□□ -1.13
LIG3-201ENST00000262327 BCL6BQ8N143 479 aaPredicted RBP7.98□□□□□ -1.13
LIG3-201ENST00000262327 C5orf17Q8NAS9 161 aa7.98□□□□□ -1.13
LIG3-201ENST00000262327 RNASE6Q93091 150 aaKnown RBP7.98□□□□□ -1.13
LIG3-201ENST00000262327 INSIG2Q9Y5U4 225 aa7.98□□□□□ -1.13
LIG3-201ENST00000262327 ATRXP46100 2492 aa7.98□□□□□ -1.13
LIG3-201ENST00000262327 OR2J3O76001 311 aa7.98□□□□□ -1.13
LIG3-201ENST00000262327 LY6HO94772 140 aa7.98□□□□□ -1.13
LIG3-201ENST00000262327 LEPROTL1O95214 131 aa7.98□□□□□ -1.13
LIG3-201ENST00000262327 AZU1P20160 251 aa7.98□□□□□ -1.13
LIG3-201ENST00000262327 DLX6P56179 175 aa7.98□□□□□ -1.13
LIG3-201ENST00000262327 FXYD7P58549 80 aa7.98□□□□□ -1.13
LIG3-201ENST00000262327 HIGD1AQ9Y241 93 aa7.98□□□□□ -1.13
LIG3-201ENST00000262327 ANKHD1Q8IWZ3 2542 aaKnown RBP7.97□□□□□ -1.13
LIG3-201ENST00000262327 M0R3E3 92 aa7.97□□□□□ -1.13
LIG3-201ENST00000262327 TMEM155Q4W5P6 130 aa7.97□□□□□ -1.13
LIG3-201ENST00000262327 SRSF12Q8WXF0 261 aaKnown RBP7.97□□□□□ -1.13
LIG3-201ENST00000262327 GTSF1LQ9H1H1 148 aa7.97□□□□□ -1.13
LIG3-201ENST00000262327 TMEM133Q9H2Q1 129 aa7.97□□□□□ -1.13
LIG3-201ENST00000262327 SIGLEC9Q9Y336 463 aa7.97□□□□□ -1.13
LIG3-201ENST00000262327 E7EQL1 145 aa7.97□□□□□ -1.13
LIG3-201ENST00000262327 LTAP01374 205 aa7.97□□□□□ -1.13
LIG3-201ENST00000262327 FOXE3Q13461 319 aa7.97□□□□□ -1.13
LIG3-201ENST00000262327 TMEM30BQ3MIR4 351 aa7.97□□□□□ -1.13
LIG3-201ENST00000262327 RASL11AQ6T310 242 aa7.97□□□□□ -1.13
LIG3-201ENST00000262327 OR4A5Q8NH83 315 aa7.97□□□□□ -1.13
LIG3-201ENST00000262327 CHRDL1Q9BU40 450 aa7.97□□□□□ -1.13
LIG3-201ENST00000262327 TMUB1Q9BVT8 246 aa7.97□□□□□ -1.13
LIG3-201ENST00000262327 SLC25A39Q9BZJ4 359 aaPredicted RBP7.97□□□□□ -1.13
LIG3-201ENST00000262327 PRSS22Q9GZN4 317 aa7.97□□□□□ -1.13
LIG3-201ENST00000262327 NGBQ9NPG2 151 aa7.97□□□□□ -1.13
LIG3-201ENST00000262327 KLF12Q9Y4X4 402 aa7.97□□□□□ -1.13
LIG3-201ENST00000262327 C19orf71A6NCJ1 209 aa7.97□□□□□ -1.13
LIG3-201ENST00000262327 CNIH1O95406 144 aa7.97□□□□□ -1.13
LIG3-201ENST00000262327 CRYGCP07315 174 aa7.97□□□□□ -1.13
LIG3-201ENST00000262327 ARMS2P0C7Q2 107 aa7.97□□□□□ -1.13
LIG3-201ENST00000262327 IGLC1P0CG04 106 aa7.97□□□□□ -1.13
LIG3-201ENST00000262327 PPP1R27Q86WC6 154 aa7.97□□□□□ -1.13
LIG3-201ENST00000262327 C8orf46Q8TAG6 207 aa7.97□□□□□ -1.13
LIG3-201ENST00000262327 TRGV9Q99603 122 aa7.97□□□□□ -1.13
LIG3-201ENST00000262327 INS-IGF2F8WCM5 200 aa7.96□□□□□ -1.14
LIG3-201ENST00000262327 SYS1-DBNDD2H3BUS1 97 aa7.96□□□□□ -1.14
LIG3-201ENST00000262327 RBPMS2Q6ZRY4 209 aaKnown RBP7.96□□□□□ -1.14
LIG3-201ENST00000262327 Q86TA4 180 aa7.96□□□□□ -1.14
LIG3-201ENST00000262327 TMEM116Q8NCL8 245 aa7.96□□□□□ -1.14
LIG3-201ENST00000262327 RALYQ9UKM9 306 aaKnown RBP7.96□□□□□ -1.14
LIG3-201ENST00000262327 IGHV3OR16-8A0A075B7F1 116 aa7.96□□□□□ -1.14
LIG3-201ENST00000262327 IGHV1-3A0A0C4DH29 117 aa7.96□□□□□ -1.14
LIG3-201ENST00000262327 LOC389332A0A1B0GUA5 103 aa7.96□□□□□ -1.14
LIG3-201ENST00000262327 TEX22C9J3V5 150 aa7.96□□□□□ -1.14
LIG3-201ENST00000262327 NUDT3O95989 172 aa7.96□□□□□ -1.14
LIG3-201ENST00000262327 HTR1DP28221 377 aa7.96□□□□□ -1.14
LIG3-201ENST00000262327 ADORA2A-AS1P86434 159 aa7.96□□□□□ -1.14
LIG3-201ENST00000262327 C1orf122Q6ZSJ8 110 aa7.96□□□□□ -1.14
LIG3-201ENST00000262327 DEFB125Q8N687 156 aa7.96□□□□□ -1.14
LIG3-201ENST00000262327 TEX45Q8NA69 505 aa7.96□□□□□ -1.14
LIG3-201ENST00000262327 FMC1Q96HJ9 113 aa7.96□□□□□ -1.14
LIG3-201ENST00000262327 RASL11BQ9BPW5 248 aa7.96□□□□□ -1.14
LIG3-201ENST00000262327 HILPDAQ9Y5L2 63 aa7.96□□□□□ -1.14
LIG3-201ENST00000262327 ZNF785A8K8V0 405 aa7.95□□□□□ -1.14
LIG3-201ENST00000262327 TNFRSF13BO14836 293 aaPredicted RBP7.95□□□□□ -1.14
LIG3-201ENST00000262327 FAM106CPP0CH98 169 aa7.95□□□□□ -1.14
LIG3-201ENST00000262327 FAM106AQ4KMX7 169 aa7.95□□□□□ -1.14
LIG3-201ENST00000262327 ATP5L2Q7Z4Y8 100 aa7.95□□□□□ -1.14
LIG3-201ENST00000262327 LINC00311Q8N616 119 aa7.95□□□□□ -1.14
LIG3-201ENST00000262327 COL6A6A6NMZ7 2263 aa7.95□□□□□ -1.14
LIG3-201ENST00000262327 IGHV3-23P01764 117 aa7.95□□□□□ -1.14
LIG3-201ENST00000262327 SCGB1A1P11684 91 aa7.95□□□□□ -1.14
LIG3-201ENST00000262327 F11RQ9Y624 299 aaKnown RBP7.95□□□□□ -1.14
LIG3-201ENST00000262327 IGKV1-17P01599 117 aa7.94□□□□□ -1.14
LIG3-201ENST00000262327 IGLV2-11P01706 119 aa7.94□□□□□ -1.14
LIG3-201ENST00000262327 CKS1BP61024 79 aa7.94□□□□□ -1.14
LIG3-201ENST00000262327 BVES-AS1Q5T3Y7 98 aa7.94□□□□□ -1.14
LIG3-201ENST00000262327 RPEQ96AT9 228 aa7.94□□□□□ -1.14
LIG3-201ENST00000262327 A0A087X0K7 114 aa7.94□□□□□ -1.14
LIG3-201ENST00000262327 IGHV3-35A0A0C4DH35 117 aa7.94□□□□□ -1.14
LIG3-201ENST00000262327 GAGE10A6NGK3 116 aa7.94□□□□□ -1.14
LIG3-201ENST00000262327 FCGR2BP31994 310 aaPredicted RBP7.94□□□□□ -1.14
LIG3-201ENST00000262327 IGFL4Q6B9Z1 124 aa7.94□□□□□ -1.14
LIG3-201ENST00000262327 LINC01560Q8TB33 94 aa7.94□□□□□ -1.14
LIG3-201ENST00000262327 C8orf49Q96NF6 230 aa7.94□□□□□ -1.14
LIG3-201ENST00000262327 ONECUT1Q9UBC0 465 aa7.94□□□□□ -1.14
LIG3-201ENST00000262327 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.94□□□□□ -1.14
LIG3-201ENST00000262327 SHISA9B4DS77 424 aa7.94□□□□□ -1.14
LIG3-201ENST00000262327 BUB1B-PAK6H3BSN5 160 aa7.94□□□□□ -1.14
LIG3-201ENST00000262327 SHISA2Q6UWI4 295 aa7.94□□□□□ -1.14
LIG3-201ENST00000262327 ZFHX3Q15911 3703 aa7.93□□□□□ -1.14
LIG3-201ENST00000262327 NCR2O95944 276 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms