RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 TEX48A0A1B0GUV7 120 aa8.76□□□□□ -1.01
SLC6A4-201ENST00000261707 SYNJ2BPP57105 145 aa8.76□□□□□ -1.01
SLC6A4-201ENST00000261707 LYPD1Q8N2G4 141 aa8.76□□□□□ -1.01
SLC6A4-201ENST00000261707 TMEM133Q9H2Q1 129 aa8.76□□□□□ -1.01
SLC6A4-201ENST00000261707 LINC00527Q9UJ94 153 aa8.76□□□□□ -1.01
SLC6A4-201ENST00000261707 ZNF236Q9UL36 1845 aa8.76□□□□□ -1.01
SLC6A4-201ENST00000261707 STRCP1A6NGW2 1772 aa8.76□□□□□ -1.01
SLC6A4-201ENST00000261707 FNDC10F2Z333 226 aa8.76□□□□□ -1.01
SLC6A4-201ENST00000261707 IGHV1-2P23083 117 aa8.76□□□□□ -1.01
SLC6A4-201ENST00000261707 NTN5Q8WTR8 489 aaPredicted RBP8.76□□□□□ -1.01
SLC6A4-201ENST00000261707 C17orf100A8MU93 164 aa8.76□□□□□ -1.01
SLC6A4-201ENST00000261707 C10orf55Q5SWW7 151 aa8.76□□□□□ -1.01
SLC6A4-201ENST00000261707 RCHY1Q96PM5 261 aa8.76□□□□□ -1.01
SLC6A4-201ENST00000261707 ERCC8Q13216 396 aa8.76□□□□□ -1.01
SLC6A4-201ENST00000261707 VWC2Q2TAL6 325 aa8.76□□□□□ -1.01
SLC6A4-201ENST00000261707 VMO1Q7Z5L0 202 aa8.76□□□□□ -1.01
SLC6A4-201ENST00000261707 GLI3P10071 1580 aa8.76□□□□□ -1.01
SLC6A4-201ENST00000261707 PRSS47A8MTI9 375 aa8.75□□□□□ -1.01
SLC6A4-201ENST00000261707 FAM104BQ5XKR9 115 aa8.75□□□□□ -1.01
SLC6A4-201ENST00000261707 C5orf24Q7Z6I8 188 aa8.75□□□□□ -1.01
SLC6A4-201ENST00000261707 TMEM141Q96I45 108 aa8.75□□□□□ -1.01
SLC6A4-201ENST00000261707 UBE2E2Q96LR5 201 aa8.75□□□□□ -1.01
SLC6A4-201ENST00000261707 HLA-DMBP28068 263 aa8.75□□□□□ -1.01
SLC6A4-201ENST00000261707 HAMPP81172 84 aa8.75□□□□□ -1.01
SLC6A4-201ENST00000261707 ZNF726P1Q15940 193 aa8.75□□□□□ -1.01
SLC6A4-201ENST00000261707 TP53TG1Q9Y2A0 90 aa8.75□□□□□ -1.01
SLC6A4-201ENST00000261707 RGPD3A6NKT7 1758 aaPredicted RBP8.75□□□□□ -1.01
SLC6A4-201ENST00000261707 PRSS46E5RG02 174 aa8.75□□□□□ -1.01
SLC6A4-201ENST00000261707 BRD3OSQ6XYD6 125 aa8.75□□□□□ -1.01
SLC6A4-201ENST00000261707 IL17RELQ6ZVW7 336 aa8.75□□□□□ -1.01
SLC6A4-201ENST00000261707 CRYGSP22914 178 aa8.75□□□□□ -1.01
SLC6A4-201ENST00000261707 PAX8Q06710 450 aa8.75□□□□□ -1.01
SLC6A4-201ENST00000261707 PIP4P2Q8N4L2 257 aa8.75□□□□□ -1.01
SLC6A4-201ENST00000261707 SH2D6Q7Z4S9 175 aa8.75□□□□□ -1.01
SLC6A4-201ENST00000261707 C9orf106Q8NAJ2 232 aa8.75□□□□□ -1.01
SLC6A4-201ENST00000261707 TRGV1A0A0A0MS02 117 aa8.74□□□□□ -1.01
SLC6A4-201ENST00000261707 TMEM75Q8N9X5 138 aa8.74□□□□□ -1.01
SLC6A4-201ENST00000261707 TIAF1O95411 115 aa8.74□□□□□ -1.01
SLC6A4-201ENST00000261707 DEFB130BP0DP73 79 aa8.74□□□□□ -1.01
SLC6A4-201ENST00000261707 DEFB130AP0DP74 79 aa8.74□□□□□ -1.01
SLC6A4-201ENST00000261707 C6orf226Q5I0X4 101 aa8.74□□□□□ -1.01
SLC6A4-201ENST00000261707 RNF144BQ7Z419 303 aa8.74□□□□□ -1.01
SLC6A4-201ENST00000261707 TCTEX1D4Q5JR98 221 aa8.74□□□□□ -1.01
SLC6A4-201ENST00000261707 ANAPC10Q9UM13 185 aa8.74□□□□□ -1.01
SLC6A4-201ENST00000261707 Q6ZRM9 215 aa8.74□□□□□ -1.01
SLC6A4-201ENST00000261707 H3BUX3 64 aa8.74□□□□□ -1.01
SLC6A4-201ENST00000261707 SUMO4Q6EEV6 95 aa8.74□□□□□ -1.01
SLC6A4-201ENST00000261707 KLK5Q9Y337 293 aaPredicted RBP8.74□□□□□ -1.01
SLC6A4-201ENST00000261707 LINC00473A8K010 186 aa8.73□□□□□ -1.01
SLC6A4-201ENST00000261707 IGFL4Q6B9Z1 124 aa8.73□□□□□ -1.01
SLC6A4-201ENST00000261707 SHANK3Q9BYB0 1731 aa8.73□□□□□ -1.01
SLC6A4-201ENST00000261707 WIPF3A6NGB9 483 aa8.73□□□□□ -1.01
SLC6A4-201ENST00000261707 PSME4Q14997 1843 aa8.73□□□□□ -1.01
SLC6A4-201ENST00000261707 COL24A1Q17RW2 1714 aa8.73□□□□□ -1.01
SLC6A4-201ENST00000261707 A0A087WWL8 130 aa8.73□□□□□ -1.01
SLC6A4-201ENST00000261707 HLA-DRB4P13762 266 aa8.73□□□□□ -1.01
SLC6A4-201ENST00000261707 MRPL51Q4U2R6 128 aaKnown RBP8.73□□□□□ -1.01
SLC6A4-201ENST00000261707 C2orf66Q6UXQ4 117 aa8.73□□□□□ -1.01
SLC6A4-201ENST00000261707 C8orf49Q96NF6 230 aa8.73□□□□□ -1.01
SLC6A4-201ENST00000261707 HLA-DRB4X5D2U9 266 aa8.73□□□□□ -1.01
SLC6A4-201ENST00000261707 TRAV12-1A0A0B4J245 112 aa8.73□□□□□ -1.01
SLC6A4-201ENST00000261707 PNRC2Q9NPJ4 139 aaKnown RBP8.73□□□□□ -1.01
SLC6A4-201ENST00000261707 RS1O15537 224 aa8.73□□□□□ -1.01
SLC6A4-201ENST00000261707 C1orf159Q96HA4 380 aa8.73□□□□□ -1.01
SLC6A4-201ENST00000261707 TRAV26-1A0A087WT03 109 aa8.72□□□□□ -1.01
SLC6A4-201ENST00000261707 SPTBP11277 2137 aa8.72□□□□□ -1.01
SLC6A4-201ENST00000261707 LINC00477Q96M19 166 aa8.72□□□□□ -1.01
SLC6A4-201ENST00000261707 SIGLEC8Q9NYZ4 499 aa8.72□□□□□ -1.01
SLC6A4-201ENST00000261707 TRIP12Q14669 1992 aaPredicted RBP8.72□□□□□ -1.01
SLC6A4-201ENST00000261707 TRAV41A0A0B4J266 112 aa8.72□□□□□ -1.01
SLC6A4-201ENST00000261707 SRRM4A7MD48 611 aaKnown RBP8.72□□□□□ -1.01
SLC6A4-201ENST00000261707 NPYP01303 97 aa8.72□□□□□ -1.01
SLC6A4-201ENST00000261707 TRBV6-6A0A0A6YYG2 114 aa8.72□□□□□ -1.01
SLC6A4-201ENST00000261707 MBD3L4A6NDZ8 208 aaPredicted RBP8.72□□□□□ -1.01
SLC6A4-201ENST00000261707 MBD3L3A6NE82 208 aaPredicted RBP8.72□□□□□ -1.01
SLC6A4-201ENST00000261707 MBD3L5A6NJ08 208 aaPredicted RBP8.72□□□□□ -1.01
SLC6A4-201ENST00000261707 CD59P13987 128 aa8.72□□□□□ -1.01
SLC6A4-201ENST00000261707 MBD3L2Q8NHZ7 208 aaPredicted RBP8.72□□□□□ -1.01
SLC6A4-201ENST00000261707 MRPL35Q9NZE8 188 aaKnown RBP8.72□□□□□ -1.01
SLC6A4-201ENST00000261707 ZNF581Q9P0T4 197 aa8.72□□□□□ -1.01
SLC6A4-201ENST00000261707 SIPA1L3O60292 1781 aaPredicted RBP8.72□□□□□ -1.01
SLC6A4-201ENST00000261707 RPL36AP83881 106 aaKnown RBP8.72□□□□□ -1.01
SLC6A4-201ENST00000261707 CR1LQ2VPA4 569 aa8.72□□□□□ -1.01
SLC6A4-201ENST00000261707 RPL36ALQ969Q0 106 aaKnown RBP8.72□□□□□ -1.01
SLC6A4-201ENST00000261707 TMEM243Q9BU79 118 aa8.72□□□□□ -1.01
SLC6A4-201ENST00000261707 ADAMTSL1Q8N6G6 1762 aa8.71□□□□□ -1.01
SLC6A4-201ENST00000261707 SCN2AQ99250 2005 aa8.71□□□□□ -1.01
SLC6A4-201ENST00000261707 HEATR5BQ9P2D3 2071 aa8.71□□□□□ -1.02
SLC6A4-201ENST00000261707 ZNF561-AS1K7EIQ3 104 aa8.71□□□□□ -1.02
SLC6A4-201ENST00000261707 FAM231DQ6ZW35 169 aa8.71□□□□□ -1.02
SLC6A4-201ENST00000261707 G3V4G9 280 aa8.71□□□□□ -1.02
SLC6A4-201ENST00000261707 C4orf48Q5BLP8 95 aa8.71□□□□□ -1.02
SLC6A4-201ENST00000261707 Q6ZS49 121 aa8.71□□□□□ -1.02
SLC6A4-201ENST00000261707 DKK2Q9UBU2 259 aa8.71□□□□□ -1.02
SLC6A4-201ENST00000261707 PRB1P04280 392 aa8.7□□□□□ -1.02
SLC6A4-201ENST00000261707 C8orf86Q6ZUL3 223 aa8.7□□□□□ -1.02
SLC6A4-201ENST00000261707 TRPT1Q86TN4 253 aaKnown RBP8.7□□□□□ -1.02
SLC6A4-201ENST00000261707 TINCRA0A1B0GVN0 87 aa8.7□□□□□ -1.02
SLC6A4-201ENST00000261707 ACYP1P07311 99 aa8.7□□□□□ -1.02
SLC6A4-201ENST00000261707 ZNF672Q499Z4 452 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms