RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 KLK2P20151 261 aa3.51□□□□□ -1.85
VPS13C-202ENST00000261517 ACTL10Q5JWF8 245 aa3.51□□□□□ -1.85
VPS13C-202ENST00000261517 C11orf52Q96A22 123 aa3.51□□□□□ -1.85
VPS13C-202ENST00000261517 ZNF292O60281 2723 aa3.51□□□□□ -1.85
VPS13C-202ENST00000261517 VGLL1Q99990 258 aa3.51□□□□□ -1.85
VPS13C-202ENST00000261517 MRPL16Q9NX20 251 aaKnown RBP3.51□□□□□ -1.85
VPS13C-202ENST00000261517 TRAV40A0A0B4J280 105 aa3.51□□□□□ -1.85
VPS13C-202ENST00000261517 IGKV1-12A0A0C4DH73 117 aa3.51□□□□□ -1.85
VPS13C-202ENST00000261517 IGKV1D-12P01611 117 aa3.51□□□□□ -1.85
VPS13C-202ENST00000261517 IGKCP01834 107 aa3.51□□□□□ -1.85
VPS13C-202ENST00000261517 GZMBP10144 247 aa3.51□□□□□ -1.85
VPS13C-202ENST00000261517 COL9A2Q14055 689 aaPredicted RBP3.51□□□□□ -1.85
VPS13C-202ENST00000261517 LY6EQ16553 131 aa3.51□□□□□ -1.85
VPS13C-202ENST00000261517 C20orf78Q9BR46 151 aa3.51□□□□□ -1.85
VPS13C-202ENST00000261517 NAV2Q8IVL1 2488 aa3.51□□□□□ -1.85
VPS13C-202ENST00000261517 SRD5A1P18405 259 aa3.51□□□□□ -1.85
VPS13C-202ENST00000261517 PYGO2Q9BRQ0 406 aa3.51□□□□□ -1.85
VPS13C-202ENST00000261517 PINLYPA6NC86 204 aa3.51□□□□□ -1.85
VPS13C-202ENST00000261517 SHISA9B4DS77 424 aa3.51□□□□□ -1.85
VPS13C-202ENST00000261517 K7EM74 188 aa3.51□□□□□ -1.85
VPS13C-202ENST00000261517 NHP2Q9NX24 153 aaKnown RBP3.51□□□□□ -1.85
VPS13C-202ENST00000261517 TRAV8-6A0A0B4J262 113 aa3.51□□□□□ -1.85
VPS13C-202ENST00000261517 PPIFP30405 207 aaKnown RBP3.51□□□□□ -1.85
VPS13C-202ENST00000261517 PGPEP1LA6NFU8 196 aa3.51□□□□□ -1.85
VPS13C-202ENST00000261517 C1QL1O75973 258 aa3.51□□□□□ -1.85
VPS13C-202ENST00000261517 SCGB1A1P11684 91 aa3.51□□□□□ -1.85
VPS13C-202ENST00000261517 IGKV1-27A0A075B6S5 117 aa3.51□□□□□ -1.85
VPS13C-202ENST00000261517 MYMXA0A1B0GTQ4 84 aa3.51□□□□□ -1.85
VPS13C-202ENST00000261517 MED14OSP0DP75 135 aa3.51□□□□□ -1.85
VPS13C-202ENST00000261517 TAL2Q16559 108 aa3.51□□□□□ -1.85
VPS13C-202ENST00000261517 NPBQ8NG41 125 aa3.51□□□□□ -1.85
VPS13C-202ENST00000261517 ITLN2Q8WWU7 325 aaPredicted RBP3.51□□□□□ -1.85
VPS13C-202ENST00000261517 TRBV6-1A0A0K0K1D8 114 aa3.5□□□□□ -1.85
VPS13C-202ENST00000261517 C15orf62A8K5M9 175 aa3.5□□□□□ -1.85
VPS13C-202ENST00000261517 FHL1Q13642 323 aa3.5□□□□□ -1.85
VPS13C-202ENST00000261517 TMEM170BQ5T4T1 132 aa3.5□□□□□ -1.85
VPS13C-202ENST00000261517 ZNF837Q96EG3 531 aaPredicted RBP3.5□□□□□ -1.85
VPS13C-202ENST00000261517 CBLN1P23435 193 aa3.5□□□□□ -1.85
VPS13C-202ENST00000261517 RHOHQ15669 191 aa3.5□□□□□ -1.85
VPS13C-202ENST00000261517 VWC2Q2TAL6 325 aa3.5□□□□□ -1.85
VPS13C-202ENST00000261517 LINC01551Q86U37 167 aa3.5□□□□□ -1.85
VPS13C-202ENST00000261517 ATG2AQ2TAZ0 1938 aa3.5□□□□□ -1.85
VPS13C-202ENST00000261517 PSG1P11464 419 aa3.5□□□□□ -1.85
VPS13C-202ENST00000261517 TEX43Q6ZNM6 134 aa3.5□□□□□ -1.85
VPS13C-202ENST00000261517 WIPF2Q8TF74 440 aaPredicted RBP3.5□□□□□ -1.85
VPS13C-202ENST00000261517 TMEM158Q8WZ71 300 aa3.5□□□□□ -1.85
VPS13C-202ENST00000261517 TMSB15BA0A087X1C1 80 aa3.5□□□□□ -1.85
VPS13C-202ENST00000261517 TRGV4A0A0C4DH28 118 aa3.5□□□□□ -1.85
VPS13C-202ENST00000261517 A0A1B0GV72 72 aa3.5□□□□□ -1.85
VPS13C-202ENST00000261517 DKK1O94907 266 aa3.5□□□□□ -1.85
VPS13C-202ENST00000261517 ATXN8Q156A1 80 aa3.5□□□□□ -1.85
VPS13C-202ENST00000261517 LRRC75A-AS1Q8N1F1 130 aa3.5□□□□□ -1.85
VPS13C-202ENST00000261517 NDUFAF3Q9BU61 184 aa3.5□□□□□ -1.85
VPS13C-202ENST00000261517 C5orf63A6NC05 138 aa3.5□□□□□ -1.85
VPS13C-202ENST00000261517 CXCL1P09341 107 aa3.5□□□□□ -1.85
VPS13C-202ENST00000261517 TTC32Q5I0X7 151 aa3.5□□□□□ -1.85
VPS13C-202ENST00000261517 IFI27L1Q96BM0 104 aa3.5□□□□□ -1.85
VPS13C-202ENST00000261517 EML5Q05BV3 1969 aa3.5□□□□□ -1.85
VPS13C-202ENST00000261517 ADARB2-AS1A8MUL3 147 aa3.5□□□□□ -1.85
VPS13C-202ENST00000261517 TDGF1P13385 188 aa3.5□□□□□ -1.85
VPS13C-202ENST00000261517 COQ2Q96H96 371 aa3.5□□□□□ -1.85
VPS13C-202ENST00000261517 TRBV20-1A0A075B6N2 111 aa3.5□□□□□ -1.85
VPS13C-202ENST00000261517 E7EQL1 145 aa3.5□□□□□ -1.85
VPS13C-202ENST00000261517 LINC01619G3V211 115 aa3.5□□□□□ -1.85
VPS13C-202ENST00000261517 LHBP01229 141 aa3.5□□□□□ -1.85
VPS13C-202ENST00000261517 SS18Q15532 418 aa3.5□□□□□ -1.85
VPS13C-202ENST00000261517 IGKV1-5P01602 117 aa3.5□□□□□ -1.85
VPS13C-202ENST00000261517 Q6ZVH6 145 aa3.5□□□□□ -1.85
VPS13C-202ENST00000261517 INSL3P51460 131 aa3.5□□□□□ -1.85
VPS13C-202ENST00000261517 PRDM6Q9NQX0 595 aa3.5□□□□□ -1.85
VPS13C-202ENST00000261517 CRIM1Q9NZV1 1036 aa3.5□□□□□ -1.85
VPS13C-202ENST00000261517 LOC107984156A0A0G2JMH3 177 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 PFN1P07737 140 aaKnown RBP3.49□□□□□ -1.85
VPS13C-202ENST00000261517 CR1LQ2VPA4 569 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 Q5PR19 223 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 ARL17AQ8IVW1 177 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 AMN1Q8IY45 258 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 IL17DQ8TAD2 202 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 PLAUP00749 431 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 HTN1P15515 57 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 WFDC12Q8WWY7 111 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 M0R381 172 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 MLNRO43193 412 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 PIP4P2Q8N4L2 257 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 ZNF319Q9P2F9 582 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 J3QKU1 62 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 HAX1O00165 279 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 SIVA1O15304 175 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 FAM74A4Q5TZK3 123 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 FOXI2Q6ZQN5 318 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 PHLDA1Q8WV24 401 aaPredicted RBP3.49□□□□□ -1.85
VPS13C-202ENST00000261517 CYTL1Q9NRR1 136 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 ERCC8Q13216 396 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 Q86TA4 180 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 VPS13AQ96RL7 3174 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 CDH23Q9H251 3354 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 EREGO14944 169 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 CD28P10747 220 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 C10orf91Q5T1B1 145 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 DMRTC2Q8IXT2 367 aaPredicted RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms