RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 C8orf49Q96NF6 230 aa12.86□□□□□ -0.35
SNCAIP-202ENST00000261368 IGF2RP11717 2491 aa12.86□□□□□ -0.35
SNCAIP-202ENST00000261368 ORM1P02763 201 aa12.86□□□□□ -0.35
SNCAIP-202ENST00000261368 KLRD1Q13241 179 aa12.86□□□□□ -0.35
SNCAIP-202ENST00000261368 AMMECR1LQ6DCA0 310 aa12.86□□□□□ -0.35
SNCAIP-202ENST00000261368 C12orf54Q6X4T0 127 aa12.86□□□□□ -0.35
SNCAIP-202ENST00000261368 C18orf15Q96N68 181 aa12.86□□□□□ -0.35
SNCAIP-202ENST00000261368 TWIST1Q15672 202 aa12.85□□□□□ -0.35
SNCAIP-202ENST00000261368 MLST8Q9BVC4 326 aa12.85□□□□□ -0.35
SNCAIP-202ENST00000261368 KLF12Q9Y4X4 402 aa12.85□□□□□ -0.35
SNCAIP-202ENST00000261368 IGKV2-40A0A087WW87 121 aaPredicted RBP12.85□□□□□ -0.35
SNCAIP-202ENST00000261368 TMEM213A2RRL7 107 aa12.85□□□□□ -0.35
SNCAIP-202ENST00000261368 IGKV2D-40P01614 121 aaPredicted RBP12.85□□□□□ -0.35
SNCAIP-202ENST00000261368 IFI27P40305 119 aaPredicted RBP12.85□□□□□ -0.35
SNCAIP-202ENST00000261368 NMUP48645 174 aa12.85□□□□□ -0.35
SNCAIP-202ENST00000261368 C3orf36Q3SXR2 165 aa12.85□□□□□ -0.35
SNCAIP-202ENST00000261368 LINC00311Q8N616 119 aa12.85□□□□□ -0.35
SNCAIP-202ENST00000261368 Q8TAT8 98 aa12.85□□□□□ -0.35
SNCAIP-202ENST00000261368 PTPRQQ9UMZ3 2332 aa12.85□□□□□ -0.35
SNCAIP-202ENST00000261368 D6R8Y8 96 aa12.85□□□□□ -0.35
SNCAIP-202ENST00000261368 SMKR1H3BMG3 65 aa12.85□□□□□ -0.35
SNCAIP-202ENST00000261368 MYCNOSP40205 109 aa12.85□□□□□ -0.35
SNCAIP-202ENST00000261368 RAB37Q96AX2 223 aa12.85□□□□□ -0.35
SNCAIP-202ENST00000261368 CEACAM4O75871 244 aa12.84□□□□□ -0.35
SNCAIP-202ENST00000261368 C7orf69Q9H7B7 122 aa12.84□□□□□ -0.35
SNCAIP-202ENST00000261368 ZNF492Q9P255 531 aa12.84□□□□□ -0.35
SNCAIP-202ENST00000261368 NCR2O95944 276 aa12.84□□□□□ -0.35
SNCAIP-202ENST00000261368 LDLRAD2Q5SZI1 272 aa12.84□□□□□ -0.35
SNCAIP-202ENST00000261368 AMN1Q8IY45 258 aa12.84□□□□□ -0.35
SNCAIP-202ENST00000261368 APOBEC3AP31941 199 aaPredicted RBP12.84□□□□□ -0.35
SNCAIP-202ENST00000261368 CKS2P33552 79 aa12.84□□□□□ -0.35
SNCAIP-202ENST00000261368 TM4SF20Q53R12 229 aa12.84□□□□□ -0.35
SNCAIP-202ENST00000261368 IGFL3Q6UXB1 125 aa12.84□□□□□ -0.35
SNCAIP-202ENST00000261368 PRELID3AQ96N28 172 aa12.84□□□□□ -0.35
SNCAIP-202ENST00000261368 C19orf71A6NCJ1 209 aa12.83□□□□□ -0.36
SNCAIP-202ENST00000261368 IGKV1-17P01599 117 aa12.83□□□□□ -0.36
SNCAIP-202ENST00000261368 RELQ04864 619 aaPredicted RBP12.83□□□□□ -0.36
SNCAIP-202ENST00000261368 LYZL1Q6UWQ5 148 aa12.83□□□□□ -0.36
SNCAIP-202ENST00000261368 FSTL3O95633 263 aa12.83□□□□□ -0.36
SNCAIP-202ENST00000261368 RBPJQ06330 500 aa12.83□□□□□ -0.36
SNCAIP-202ENST00000261368 PRSS22Q9GZN4 317 aa12.83□□□□□ -0.36
SNCAIP-202ENST00000261368 IGHV3-66A0A0C4DH42 116 aa12.83□□□□□ -0.36
SNCAIP-202ENST00000261368 PPIFP30405 207 aaKnown RBP12.83□□□□□ -0.36
SNCAIP-202ENST00000261368 GPR183P32249 361 aa12.83□□□□□ -0.36
SNCAIP-202ENST00000261368 FAM71F2Q6NXP2 309 aa12.83□□□□□ -0.36
SNCAIP-202ENST00000261368 PET117Q6UWS5 81 aa12.83□□□□□ -0.36
SNCAIP-202ENST00000261368 NPIPB5A8MRT5 1133 aa12.82□□□□□ -0.36
SNCAIP-202ENST00000261368 CRYGCP07315 174 aa12.82□□□□□ -0.36
SNCAIP-202ENST00000261368 TRBV19A0A075B6N1 114 aa12.82□□□□□ -0.36
SNCAIP-202ENST00000261368 ZNF785A8K8V0 405 aa12.82□□□□□ -0.36
SNCAIP-202ENST00000261368 INS-IGF2F8WCM5 200 aa12.82□□□□□ -0.36
SNCAIP-202ENST00000261368 CACNG7P62955 275 aa12.82□□□□□ -0.36
SNCAIP-202ENST00000261368 CT83Q5H943 113 aa12.82□□□□□ -0.36
SNCAIP-202ENST00000261368 IGHV3-49A0A0A0MS15 119 aa12.82□□□□□ -0.36
SNCAIP-202ENST00000261368 BCL6BQ8N143 479 aaPredicted RBP12.82□□□□□ -0.36
SNCAIP-202ENST00000261368 TEX22C9J3V5 150 aa12.81□□□□□ -0.36
SNCAIP-202ENST00000261368 FAM106CPP0CH98 169 aa12.81□□□□□ -0.36
SNCAIP-202ENST00000261368 FAM106AQ4KMX7 169 aa12.81□□□□□ -0.36
SNCAIP-202ENST00000261368 NDFIP1Q9BT67 221 aa12.81□□□□□ -0.36
SNCAIP-202ENST00000261368 SPG11Q96JI7 2443 aa12.81□□□□□ -0.36
SNCAIP-202ENST00000261368 FAM120AOSQ5T036 256 aa12.81□□□□□ -0.36
SNCAIP-202ENST00000261368 PPP1R14DQ9NXH3 145 aa12.81□□□□□ -0.36
SNCAIP-202ENST00000261368 PSG3Q16557 428 aa12.8□□□□□ -0.36
SNCAIP-202ENST00000261368 BVES-AS1Q5T3Y7 98 aa12.8□□□□□ -0.36
SNCAIP-202ENST00000261368 SMIM12Q96EX1 92 aa12.8□□□□□ -0.36
SNCAIP-202ENST00000261368 GFRA4Q9GZZ7 299 aa12.8□□□□□ -0.36
SNCAIP-202ENST00000261368 THYN1Q9P016 225 aa12.8□□□□□ -0.36
SNCAIP-202ENST00000261368 FOXC1Q12948 553 aa12.8□□□□□ -0.36
SNCAIP-202ENST00000261368 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.8□□□□□ -0.36
SNCAIP-202ENST00000261368 S100A7AQ86SG5 101 aa12.8□□□□□ -0.36
SNCAIP-202ENST00000261368 SHANK2-AS3Q9BTD1 123 aa12.8□□□□□ -0.36
SNCAIP-202ENST00000261368 B9A039 149 aa12.8□□□□□ -0.36
SNCAIP-202ENST00000261368 NBR2O15453 112 aa12.8□□□□□ -0.36
SNCAIP-202ENST00000261368 HAX1O00165 279 aa12.79□□□□□ -0.36
SNCAIP-202ENST00000261368 S100A7P31151 101 aa12.79□□□□□ -0.36
SNCAIP-202ENST00000261368 MFAP4P55083 255 aa12.79□□□□□ -0.36
SNCAIP-202ENST00000261368 TIMD4Q96H15 378 aa12.79□□□□□ -0.36
SNCAIP-202ENST00000261368 DPM3Q9P2X0 92 aa12.79□□□□□ -0.36
SNCAIP-202ENST00000261368 J3KRW8 73 aa12.79□□□□□ -0.36
SNCAIP-202ENST00000261368 DLX6P56179 175 aa12.79□□□□□ -0.36
SNCAIP-202ENST00000261368 SHISA9B4DS77 424 aa12.79□□□□□ -0.36
SNCAIP-202ENST00000261368 I3L2K1 104 aa12.79□□□□□ -0.36
SNCAIP-202ENST00000261368 PRSS1P07477 247 aa12.79□□□□□ -0.36
SNCAIP-202ENST00000261368 LOXL1Q08397 574 aaPredicted RBP12.79□□□□□ -0.36
SNCAIP-202ENST00000261368 ECSCRQ19T08 205 aa12.79□□□□□ -0.36
SNCAIP-202ENST00000261368 ORMDL3Q8N138 153 aa12.78□□□□□ -0.36
SNCAIP-202ENST00000261368 ZNF491Q8N8L2 437 aa12.78□□□□□ -0.36
SNCAIP-202ENST00000261368 NEU4Q8WWR8 484 aaPredicted RBP12.78□□□□□ -0.36
SNCAIP-202ENST00000261368 SPENQ96T58 3664 aaKnown RBP12.78□□□□□ -0.36
SNCAIP-202ENST00000261368 C7orf71A4D174 169 aa12.78□□□□□ -0.36
SNCAIP-202ENST00000261368 CEACAM3P40198 252 aa12.78□□□□□ -0.36
SNCAIP-202ENST00000261368 ZNF672Q499Z4 452 aaPredicted RBP12.78□□□□□ -0.36
SNCAIP-202ENST00000261368 K7EIM0 57 aa12.77□□□□□ -0.36
SNCAIP-202ENST00000261368 SH2D1AO60880 128 aa12.77□□□□□ -0.36
SNCAIP-202ENST00000261368 IGLV1-47P01700 117 aa12.77□□□□□ -0.36
SNCAIP-202ENST00000261368 HLA-DMBP28068 263 aa12.77□□□□□ -0.36
SNCAIP-202ENST00000261368 MRGPRG-AS1Q2M3A8 158 aa12.77□□□□□ -0.36
SNCAIP-202ENST00000261368 TMEM75Q8N9X5 138 aa12.77□□□□□ -0.36
SNCAIP-202ENST00000261368 GAGE10A6NGK3 116 aa12.77□□□□□ -0.37
SNCAIP-202ENST00000261368 GRNP28799 593 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms