RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 RNF166Q96A37 237 aaPredicted RBP9.78□□□□□ -0.84
COL8A1-201ENST00000261037 TPRP12270 2363 aaKnown RBP9.78□□□□□ -0.84
COL8A1-201ENST00000261037 A0A1W2PPI3 338 aa9.78□□□□□ -0.84
COL8A1-201ENST00000261037 TRAV8-3A0A0A6YYJ7 113 aa9.78□□□□□ -0.84
COL8A1-201ENST00000261037 TRAV1-1A0A0B4J248 108 aa9.78□□□□□ -0.84
COL8A1-201ENST00000261037 SLC25A16P16260 332 aa9.78□□□□□ -0.84
COL8A1-201ENST00000261037 DAZ1Q9NQZ3 744 aaKnown RBP9.78□□□□□ -0.84
COL8A1-201ENST00000261037 TRBV6-6A0A0A6YYG2 114 aa9.77□□□□□ -0.84
COL8A1-201ENST00000261037 SSBP2P81877 361 aaPredicted RBP9.77□□□□□ -0.84
COL8A1-201ENST00000261037 A0A1B0GW64 132 aa9.77□□□□□ -0.85
COL8A1-201ENST00000261037 TMEM213A2RRL7 107 aa9.77□□□□□ -0.85
COL8A1-201ENST00000261037 C3orf79P0CE67 100 aa9.77□□□□□ -0.85
COL8A1-201ENST00000261037 SPOCK3Q9BQ16 436 aa9.77□□□□□ -0.85
COL8A1-201ENST00000261037 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.77□□□□□ -0.85
COL8A1-201ENST00000261037 ZNF48Q96MX3 618 aaPredicted RBP9.77□□□□□ -0.85
COL8A1-201ENST00000261037 SIGMAR1Q99720 223 aa9.77□□□□□ -0.85
COL8A1-201ENST00000261037 ASXL3Q9C0F0 2248 aa9.77□□□□□ -0.85
COL8A1-201ENST00000261037 GAGE12JA6NER3 117 aa9.77□□□□□ -0.85
COL8A1-201ENST00000261037 SEC11AP67812 179 aa9.77□□□□□ -0.85
COL8A1-201ENST00000261037 GAGE1Q13065 139 aa9.77□□□□□ -0.85
COL8A1-201ENST00000261037 GAGE4Q13068 117 aa9.77□□□□□ -0.85
COL8A1-201ENST00000261037 GAGE5Q13069 117 aa9.77□□□□□ -0.85
COL8A1-201ENST00000261037 SPINK13Q1W4C9 94 aa9.77□□□□□ -0.85
COL8A1-201ENST00000261037 TIMM21Q9BVV7 248 aa9.77□□□□□ -0.85
COL8A1-201ENST00000261037 GBF1Q92538 1859 aa9.77□□□□□ -0.85
COL8A1-201ENST00000261037 G3V318 75 aa9.77□□□□□ -0.85
COL8A1-201ENST00000261037 ITGB1BP1O14713 200 aa9.77□□□□□ -0.85
COL8A1-201ENST00000261037 SHANK2-AS3Q9BTD1 123 aa9.77□□□□□ -0.85
COL8A1-201ENST00000261037 REG4Q9BYZ8 158 aa9.77□□□□□ -0.85
COL8A1-201ENST00000261037 LEPROTO15243 131 aa9.76□□□□□ -0.85
COL8A1-201ENST00000261037 DTX1Q86Y01 620 aa9.76□□□□□ -0.85
COL8A1-201ENST00000261037 MSMBP08118 114 aa9.76□□□□□ -0.85
COL8A1-201ENST00000261037 SS18Q15532 418 aa9.76□□□□□ -0.85
COL8A1-201ENST00000261037 GAGE2EQ4V326 116 aa9.76□□□□□ -0.85
COL8A1-201ENST00000261037 GAGE2DQ9UEU5 116 aa9.76□□□□□ -0.85
COL8A1-201ENST00000261037 ARMS2P0C7Q2 107 aa9.76□□□□□ -0.85
COL8A1-201ENST00000261037 RASL11AQ6T310 242 aa9.76□□□□□ -0.85
COL8A1-201ENST00000261037 NDUFB8O95169 186 aa9.76□□□□□ -0.85
COL8A1-201ENST00000261037 C2orf82Q6UX34 121 aa9.76□□□□□ -0.85
COL8A1-201ENST00000261037 SYS1-DBNDD2H3BUS1 97 aa9.75□□□□□ -0.85
COL8A1-201ENST00000261037 GATA4P43694 442 aa9.75□□□□□ -0.85
COL8A1-201ENST00000261037 ASPHD1Q5U4P2 390 aa9.75□□□□□ -0.85
COL8A1-201ENST00000261037 LINC01619G3V211 115 aa9.75□□□□□ -0.85
COL8A1-201ENST00000261037 TRAV26-2A0A0B4J265 109 aa9.75□□□□□ -0.85
COL8A1-201ENST00000261037 F8WEM9 126 aa9.75□□□□□ -0.85
COL8A1-201ENST00000261037 PRIMA1Q86XR5 153 aa9.75□□□□□ -0.85
COL8A1-201ENST00000261037 RNF114Q9Y508 228 aa9.75□□□□□ -0.85
COL8A1-201ENST00000261037 TRAV12-2A0A075B6T6 113 aa9.75□□□□□ -0.85
COL8A1-201ENST00000261037 IGKV1-6A0A0C4DH72 117 aa9.75□□□□□ -0.85
COL8A1-201ENST00000261037 WISP1O95388 367 aa9.75□□□□□ -0.85
COL8A1-201ENST00000261037 OCIAD2Q56VL3 154 aa9.75□□□□□ -0.85
COL8A1-201ENST00000261037 C1QTNF4Q9BXJ3 329 aa9.75□□□□□ -0.85
COL8A1-201ENST00000261037 F5H768 121 aa9.74□□□□□ -0.85
COL8A1-201ENST00000261037 TNFRSF6BO95407 300 aa9.74□□□□□ -0.85
COL8A1-201ENST00000261037 LGALS1P09382 135 aaKnown RBP9.74□□□□□ -0.85
COL8A1-201ENST00000261037 CFHR2P36980 270 aa9.74□□□□□ -0.85
COL8A1-201ENST00000261037 IGHV3-38A0A0C4DH36 116 aa9.74□□□□□ -0.85
COL8A1-201ENST00000261037 ESDP10768 282 aa9.74□□□□□ -0.85
COL8A1-201ENST00000261037 MPV17L2Q567V2 206 aa9.74□□□□□ -0.85
COL8A1-201ENST00000261037 FOXL2NBQ6ZUU3 175 aa9.74□□□□□ -0.85
COL8A1-201ENST00000261037 LIME1Q9H400 295 aa9.74□□□□□ -0.85
COL8A1-201ENST00000261037 ZNF562Q6V9R5 426 aa9.74□□□□□ -0.85
COL8A1-201ENST00000261037 SPTA1P02549 2419 aa9.74□□□□□ -0.85
COL8A1-201ENST00000261037 STPG4Q8N801 248 aa9.74□□□□□ -0.85
COL8A1-201ENST00000261037 LYPD1Q8N2G4 141 aa9.73□□□□□ -0.85
COL8A1-201ENST00000261037 FAM110DQ8TAY7 271 aaPredicted RBP9.73□□□□□ -0.85
COL8A1-201ENST00000261037 FAM186AA6NE01 2351 aa9.73□□□□□ -0.85
COL8A1-201ENST00000261037 MYMXA0A1B0GTQ4 84 aa9.73□□□□□ -0.85
COL8A1-201ENST00000261037 A0A1B0GUS0 222 aa9.73□□□□□ -0.85
COL8A1-201ENST00000261037 ZC2HC1BQ5TFG8 222 aa9.73□□□□□ -0.85
COL8A1-201ENST00000261037 TP53TG1Q9Y2A0 90 aa9.73□□□□□ -0.85
COL8A1-201ENST00000261037 ARHGEF17Q96PE2 2063 aaPredicted RBP9.73□□□□□ -0.85
COL8A1-201ENST00000261037 FHL1Q13642 323 aa9.73□□□□□ -0.85
COL8A1-201ENST00000261037 KIR3DS1Q14943 382 aa9.73□□□□□ -0.85
COL8A1-201ENST00000261037 GAGE2AQ6NT46 116 aa9.73□□□□□ -0.85
COL8A1-201ENST00000261037 IGHV1-69DA0A0B4J2H0 117 aa9.73□□□□□ -0.85
COL8A1-201ENST00000261037 LINC01549A6NIU2 74 aa9.73□□□□□ -0.85
COL8A1-201ENST00000261037 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.73□□□□□ -0.85
COL8A1-201ENST00000261037 IGHV1-69P01742 117 aa9.73□□□□□ -0.85
COL8A1-201ENST00000261037 FAM120AOSQ5T036 256 aa9.73□□□□□ -0.85
COL8A1-201ENST00000261037 CHAC1Q9BUX1 264 aa9.73□□□□□ -0.85
COL8A1-201ENST00000261037 A0A096LPF7 62 aa9.72□□□□□ -0.85
COL8A1-201ENST00000261037 PAX9P55771 341 aa9.72□□□□□ -0.85
COL8A1-201ENST00000261037 C1orf194Q5T5A4 169 aa9.72□□□□□ -0.85
COL8A1-201ENST00000261037 TRPT1Q86TN4 253 aaKnown RBP9.72□□□□□ -0.85
COL8A1-201ENST00000261037 ZNF503-AS2A6NEH8 195 aa9.72□□□□□ -0.85
COL8A1-201ENST00000261037 UBE2E1P51965 193 aa9.72□□□□□ -0.85
COL8A1-201ENST00000261037 CACNA1EQ15878 2313 aa9.72□□□□□ -0.85
COL8A1-201ENST00000261037 K7ENP7 123 aa9.72□□□□□ -0.85
COL8A1-201ENST00000261037 ADCYAP1P18509 176 aa9.72□□□□□ -0.85
COL8A1-201ENST00000261037 DAD1P61803 113 aa9.72□□□□□ -0.85
COL8A1-201ENST00000261037 NEGR1Q7Z3B1 354 aa9.72□□□□□ -0.85
COL8A1-201ENST00000261037 TMEM75Q8N9X5 138 aa9.72□□□□□ -0.85
COL8A1-201ENST00000261037 TPSG1Q9NRR2 321 aa9.72□□□□□ -0.85
COL8A1-201ENST00000261037 LY96Q9Y6Y9 160 aa9.72□□□□□ -0.85
COL8A1-201ENST00000261037 CYYR1Q96J86 154 aa9.72□□□□□ -0.85
COL8A1-201ENST00000261037 TSC2P49815 1807 aa9.72□□□□□ -0.85
COL8A1-201ENST00000261037 GAGE12BA1L429 117 aa9.71□□□□□ -0.85
COL8A1-201ENST00000261037 GAGE7O76087 117 aa9.71□□□□□ -0.85
COL8A1-201ENST00000261037 GAGE12FP0CL80 117 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms