RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 IGHG4P01861 327 aa17.24■□□□□ 0.35
SIX3-201ENST00000260653 TCEAL7Q9BRU2 100 aa17.24■□□□□ 0.35
SIX3-201ENST00000260653 YAE1D1Q9NRH1 226 aa17.24■□□□□ 0.35
SIX3-201ENST00000260653 C5orf17Q8NAS9 161 aa17.24■□□□□ 0.35
SIX3-201ENST00000260653 IGF2BP2-AS1Q96M15 143 aa17.24■□□□□ 0.35
SIX3-201ENST00000260653 OTORQ9NRC9 128 aa17.24■□□□□ 0.35
SIX3-201ENST00000260653 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.23■□□□□ 0.35
SIX3-201ENST00000260653 H7BYZ3 331 aa17.23■□□□□ 0.35
SIX3-201ENST00000260653 PSMB8P28062 276 aa17.23■□□□□ 0.35
SIX3-201ENST00000260653 CNN1P51911 297 aaKnown RBP17.23■□□□□ 0.35
SIX3-201ENST00000260653 OR8I2Q8N0Y5 310 aa17.23■□□□□ 0.35
SIX3-201ENST00000260653 RNF24Q9Y225 148 aa17.23■□□□□ 0.35
SIX3-201ENST00000260653 ZNF207O43670 478 aaKnown RBP17.23■□□□□ 0.35
SIX3-201ENST00000260653 OR4X2Q8NGF9 303 aa17.23■□□□□ 0.35
SIX3-201ENST00000260653 CDC42EP3Q9UKI2 254 aa17.23■□□□□ 0.35
SIX3-201ENST00000260653 LY96Q9Y6Y9 160 aa17.23■□□□□ 0.35
SIX3-201ENST00000260653 ISLRO14498 428 aa17.22■□□□□ 0.35
SIX3-201ENST00000260653 CRYBA1P05813 215 aa17.22■□□□□ 0.35
SIX3-201ENST00000260653 ANAPC16Q96DE5 110 aa17.22■□□□□ 0.35
SIX3-201ENST00000260653 SFRP2Q96HF1 295 aa17.22■□□□□ 0.35
SIX3-201ENST00000260653 C2orf88Q9BSF0 95 aa17.22■□□□□ 0.35
SIX3-201ENST00000260653 A0A0G2JLM5 398 aa17.22■□□□□ 0.35
SIX3-201ENST00000260653 CXCL1P09341 107 aa17.22■□□□□ 0.35
SIX3-201ENST00000260653 RPL7P18124 248 aaKnown RBP17.22■□□□□ 0.35
SIX3-201ENST00000260653 SIGLEC15Q6ZMC9 328 aa17.22■□□□□ 0.35
SIX3-201ENST00000260653 TGIF2-C20orf24A0A0A6YYL0 155 aa17.21■□□□□ 0.35
SIX3-201ENST00000260653 IGLV2-8P01709 118 aa17.21■□□□□ 0.35
SIX3-201ENST00000260653 OR5I1Q13606 314 aa17.21■□□□□ 0.35
SIX3-201ENST00000260653 LBHQ53QV2 105 aaPredicted RBP17.21■□□□□ 0.35
SIX3-201ENST00000260653 TEX38Q6PEX7 206 aa17.21■□□□□ 0.35
SIX3-201ENST00000260653 SGK494Q96LW2 274 aa17.21■□□□□ 0.35
SIX3-201ENST00000260653 ATG101Q9BSB4 218 aa17.21■□□□□ 0.35
SIX3-201ENST00000260653 IGHV3OR16-13A0A075B7E8 117 aa17.21■□□□□ 0.35
SIX3-201ENST00000260653 IGHV3-74A0A0B4J1X5 117 aa17.21■□□□□ 0.35
SIX3-201ENST00000260653 IGHV3-66A0A0C4DH42 116 aa17.21■□□□□ 0.35
SIX3-201ENST00000260653 BUB3O43684 328 aa17.21■□□□□ 0.35
SIX3-201ENST00000260653 RAB5AP20339 215 aa17.21■□□□□ 0.35
SIX3-201ENST00000260653 BMI1P35226 326 aa17.21■□□□□ 0.35
SIX3-201ENST00000260653 NHLRC2Q8NBF2 726 aa17.21■□□□□ 0.35
SIX3-201ENST00000260653 ANK3Q12955 4377 aaKnown RBP17.21■□□□□ 0.35
SIX3-201ENST00000260653 IGHV3-49A0A0A0MS15 119 aa17.2■□□□□ 0.34
SIX3-201ENST00000260653 APOHP02749 345 aaPredicted RBP17.2■□□□□ 0.34
SIX3-201ENST00000260653 TCRAP04437 139 aa17.2■□□□□ 0.34
SIX3-201ENST00000260653 SMAD5-AS1Q9Y6J3 95 aa17.2■□□□□ 0.34
SIX3-201ENST00000260653 OR5B12Q96R08 314 aa17.2■□□□□ 0.34
SIX3-201ENST00000260653 METTL26Q96S19 204 aa17.2■□□□□ 0.34
SIX3-201ENST00000260653 OTOGQ6ZRI0 2925 aa17.19■□□□□ 0.34
SIX3-201ENST00000260653 CUBNO60494 3623 aa17.19■□□□□ 0.34
SIX3-201ENST00000260653 CD99P14209 185 aa17.19■□□□□ 0.34
SIX3-201ENST00000260653 S100A7P31151 101 aa17.19■□□□□ 0.34
SIX3-201ENST00000260653 UNQ9165/PRO28630Q6UXU0 137 aa17.19■□□□□ 0.34
SIX3-201ENST00000260653 PRB4P10163 310 aaPredicted RBP17.19■□□□□ 0.34
SIX3-201ENST00000260653 GALR1P47211 349 aa17.19■□□□□ 0.34
SIX3-201ENST00000260653 PDE6HQ13956 83 aa17.19■□□□□ 0.34
SIX3-201ENST00000260653 REC114Q7Z4M0 266 aa17.19■□□□□ 0.34
SIX3-201ENST00000260653 CMTM2Q8TAZ6 248 aa17.18■□□□□ 0.34
SIX3-201ENST00000260653 NF1P21359 2839 aa17.18■□□□□ 0.34
SIX3-201ENST00000260653 UBE2G1P62253 170 aa17.18■□□□□ 0.34
SIX3-201ENST00000260653 TMEM183BQ1AE95 376 aa17.18■□□□□ 0.34
SIX3-201ENST00000260653 LYPD1Q8N2G4 141 aa17.18■□□□□ 0.34
SIX3-201ENST00000260653 KLF12Q9Y4X4 402 aa17.18■□□□□ 0.34
SIX3-201ENST00000260653 PFN1P07737 140 aaKnown RBP17.17■□□□□ 0.34
SIX3-201ENST00000260653 MGST1P10620 155 aaKnown RBP17.17■□□□□ 0.34
SIX3-201ENST00000260653 TMEM86BQ8N661 226 aa17.17■□□□□ 0.34
SIX3-201ENST00000260653 DNAJC9-AS1A6NH13 148 aa17.17■□□□□ 0.34
SIX3-201ENST00000260653 NDUFA4O00483 81 aa17.17■□□□□ 0.34
SIX3-201ENST00000260653 RPLP1P05386 114 aaKnown RBP17.17■□□□□ 0.34
SIX3-201ENST00000260653 M0R3E3 92 aa17.16■□□□□ 0.34
SIX3-201ENST00000260653 FOLR2P14207 255 aa17.16■□□□□ 0.34
SIX3-201ENST00000260653 GOLT1AQ6ZVE7 132 aa17.16■□□□□ 0.34
SIX3-201ENST00000260653 BAGE2Q86Y30 109 aa17.16■□□□□ 0.34
SIX3-201ENST00000260653 Q8N2B8 174 aa17.16■□□□□ 0.34
SIX3-201ENST00000260653 OR10G8Q8NGN5 311 aa17.16■□□□□ 0.34
SIX3-201ENST00000260653 SMR3AQ99954 134 aa17.16■□□□□ 0.34
SIX3-201ENST00000260653 TMEM89A2RUT3 159 aa17.16■□□□□ 0.34
SIX3-201ENST00000260653 SLC35B1P78383 322 aa17.16■□□□□ 0.34
SIX3-201ENST00000260653 TRAV8-1A0A0A6YYK1 113 aa17.15■□□□□ 0.34
SIX3-201ENST00000260653 PPP1R2P9O14990 202 aa17.15■□□□□ 0.34
SIX3-201ENST00000260653 U3KQE9 123 aa17.15■□□□□ 0.34
SIX3-201ENST00000260653 GCGP01275 180 aa17.15■□□□□ 0.34
SIX3-201ENST00000260653 ERVFC1-1P60608 527 aa17.15■□□□□ 0.34
SIX3-201ENST00000260653 RNASE7Q9H1E1 156 aaKnown RBP17.15■□□□□ 0.34
SIX3-201ENST00000260653 SERTAD4Q9NUC0 356 aa17.15■□□□□ 0.34
SIX3-201ENST00000260653 PEF1Q9UBV8 284 aaKnown RBP17.15■□□□□ 0.34
SIX3-201ENST00000260653 FMC1Q96HJ9 113 aa17.14■□□□□ 0.33
SIX3-201ENST00000260653 AAMDCQ9H7C9 122 aa17.14■□□□□ 0.33
SIX3-201ENST00000260653 ESM1Q9NQ30 184 aa17.14■□□□□ 0.33
SIX3-201ENST00000260653 GGCTO75223 188 aaKnown RBP17.14■□□□□ 0.33
SIX3-201ENST00000260653 NUTF2P61970 127 aaKnown RBP17.14■□□□□ 0.33
SIX3-201ENST00000260653 SNRPEP62304 92 aaKnown RBP17.14■□□□□ 0.33
SIX3-201ENST00000260653 FAM181BA6NEQ2 426 aa17.13■□□□□ 0.33
SIX3-201ENST00000260653 RPS10P46783 165 aaKnown RBP17.13■□□□□ 0.33
SIX3-201ENST00000260653 FOXE3Q13461 319 aa17.13■□□□□ 0.33
SIX3-201ENST00000260653 C1orf194Q5T5A4 169 aa17.13■□□□□ 0.33
SIX3-201ENST00000260653 IGFL4Q6B9Z1 124 aa17.13■□□□□ 0.33
SIX3-201ENST00000260653 ZFP82Q8N141 532 aa17.13■□□□□ 0.33
SIX3-201ENST00000260653 FAM210BQ96KR6 192 aa17.13■□□□□ 0.33
SIX3-201ENST00000260653 HIVEP2P31629 2446 aa17.13■□□□□ 0.33
SIX3-201ENST00000260653 TRBV24-1A0A075B6N3 115 aa17.13■□□□□ 0.33
SIX3-201ENST00000260653 GPR82Q96P67 336 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms