RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 CENPWQ5EE01 88 aa9.08□□□□□ -0.96
PDE6B-201ENST00000255622 C10orf55Q5SWW7 151 aa9.08□□□□□ -0.96
PDE6B-201ENST00000255622 TXNDC17Q9BRA2 123 aa9.08□□□□□ -0.96
PDE6B-201ENST00000255622 SFXN3Q9BWM7 321 aa9.08□□□□□ -0.96
PDE6B-201ENST00000255622 RNASE7Q9H1E1 156 aaKnown RBP9.08□□□□□ -0.96
PDE6B-201ENST00000255622 SLC25A10Q9UBX3 287 aaPredicted RBP9.08□□□□□ -0.96
PDE6B-201ENST00000255622 ZGRF1Q86YA3 2104 aa9.08□□□□□ -0.96
PDE6B-201ENST00000255622 TRAV5A0A0B4J249 113 aa9.08□□□□□ -0.96
PDE6B-201ENST00000255622 GGTLC3B5MD39 225 aa9.08□□□□□ -0.96
PDE6B-201ENST00000255622 POU2AF1Q16633 256 aa9.08□□□□□ -0.96
PDE6B-201ENST00000255622 SIGLEC15Q6ZMC9 328 aa9.08□□□□□ -0.96
PDE6B-201ENST00000255622 PQLC2Q6ZP29 291 aa9.08□□□□□ -0.96
PDE6B-201ENST00000255622 VGLL1Q99990 258 aa9.08□□□□□ -0.96
PDE6B-201ENST00000255622 PLXNB1O43157 2135 aa9.08□□□□□ -0.96
PDE6B-201ENST00000255622 F8WDY8 70 aa9.07□□□□□ -0.96
PDE6B-201ENST00000255622 KLK10O43240 276 aa9.07□□□□□ -0.96
PDE6B-201ENST00000255622 RNASE2P10153 161 aaKnown RBP9.07□□□□□ -0.96
PDE6B-201ENST00000255622 AMTNQ6UX39 209 aa9.07□□□□□ -0.96
PDE6B-201ENST00000255622 C11orf52Q96A22 123 aa9.07□□□□□ -0.96
PDE6B-201ENST00000255622 RAB9BQ9NP90 201 aa9.07□□□□□ -0.96
PDE6B-201ENST00000255622 hADV38S2A0JD32 116 aa9.07□□□□□ -0.96
PDE6B-201ENST00000255622 SSX8Q7RTT4 187 aa9.07□□□□□ -0.96
PDE6B-201ENST00000255622 NHLRC2Q8NBF2 726 aa9.07□□□□□ -0.96
PDE6B-201ENST00000255622 H1FXQ92522 213 aaKnown RBP9.07□□□□□ -0.96
PDE6B-201ENST00000255622 IL36BQ9NZH7 164 aa9.07□□□□□ -0.96
PDE6B-201ENST00000255622 A0A0G2JNJ9 132 aa9.07□□□□□ -0.96
PDE6B-201ENST00000255622 PRB3Q04118 309 aaPredicted RBP9.07□□□□□ -0.96
PDE6B-201ENST00000255622 BSPH1Q075Z2 132 aa9.07□□□□□ -0.96
PDE6B-201ENST00000255622 TEX36Q5VZQ5 186 aa9.07□□□□□ -0.96
PDE6B-201ENST00000255622 LYPD2Q6UXB3 125 aa9.07□□□□□ -0.96
PDE6B-201ENST00000255622 TMEM70Q9BUB7 260 aa9.07□□□□□ -0.96
PDE6B-201ENST00000255622 MS4A6AQ9H2W1 248 aa9.07□□□□□ -0.96
PDE6B-201ENST00000255622 CDIP1Q9H305 208 aa9.07□□□□□ -0.96
PDE6B-201ENST00000255622 LINC00574Q9H8X3 128 aa9.07□□□□□ -0.96
PDE6B-201ENST00000255622 Q9UFV3 132 aa9.07□□□□□ -0.96
PDE6B-201ENST00000255622 SOX21Q9Y651 276 aaPredicted RBP9.07□□□□□ -0.96
PDE6B-201ENST00000255622 LINC00694P0DN24 101 aa9.06□□□□□ -0.96
PDE6B-201ENST00000255622 DLX1P56177 255 aa9.06□□□□□ -0.96
PDE6B-201ENST00000255622 C3orf36Q3SXR2 165 aa9.06□□□□□ -0.96
PDE6B-201ENST00000255622 TMEM200BQ69YZ2 307 aa9.06□□□□□ -0.96
PDE6B-201ENST00000255622 ZNF833PQ6ZTB9 187 aa9.06□□□□□ -0.96
PDE6B-201ENST00000255622 MMD2Q8IY49 270 aa9.06□□□□□ -0.96
PDE6B-201ENST00000255622 FAM57AQ8TBR7 257 aa9.06□□□□□ -0.96
PDE6B-201ENST00000255622 CCL17Q92583 94 aa9.06□□□□□ -0.96
PDE6B-201ENST00000255622 LINC00312Q9Y6C7 94 aa9.06□□□□□ -0.96
PDE6B-201ENST00000255622 V9GYV3 84 aa9.06□□□□□ -0.96
PDE6B-201ENST00000255622 SEC61GP60059 68 aa9.06□□□□□ -0.96
PDE6B-201ENST00000255622 RASL11AQ6T310 242 aa9.06□□□□□ -0.96
PDE6B-201ENST00000255622 C18orf32Q8TCD1 76 aa9.06□□□□□ -0.96
PDE6B-201ENST00000255622 LINC00479Q96M42 142 aa9.06□□□□□ -0.96
PDE6B-201ENST00000255622 AREGP15514 252 aa9.06□□□□□ -0.96
PDE6B-201ENST00000255622 LGALS4P56470 323 aa9.06□□□□□ -0.96
PDE6B-201ENST00000255622 C2orf83Q53S99 150 aa9.06□□□□□ -0.96
PDE6B-201ENST00000255622 Q6AWC8 147 aa9.06□□□□□ -0.96
PDE6B-201ENST00000255622 FAM19A5Q7Z5A7 132 aaPredicted RBP9.06□□□□□ -0.96
PDE6B-201ENST00000255622 ABCA4P78363 2273 aa9.05□□□□□ -0.96
PDE6B-201ENST00000255622 C17orf100A8MU93 164 aa9.05□□□□□ -0.96
PDE6B-201ENST00000255622 C9JCJ5 164 aa9.05□□□□□ -0.96
PDE6B-201ENST00000255622 REG1AP05451 166 aa9.05□□□□□ -0.96
PDE6B-201ENST00000255622 RITA1Q96K30 269 aa9.05□□□□□ -0.96
PDE6B-201ENST00000255622 ZNF714Q96N38 554 aa9.05□□□□□ -0.96
PDE6B-201ENST00000255622 TPSG1Q9NRR2 321 aa9.05□□□□□ -0.96
PDE6B-201ENST00000255622 AKAP6Q13023 2319 aa9.05□□□□□ -0.96
PDE6B-201ENST00000255622 TLN1Q9Y490 2541 aaKnown RBP9.05□□□□□ -0.96
PDE6B-201ENST00000255622 CGB1A6NKQ9 187 aa9.05□□□□□ -0.96
PDE6B-201ENST00000255622 THBDP07204 575 aa9.05□□□□□ -0.96
PDE6B-201ENST00000255622 GNG5P63218 68 aa9.05□□□□□ -0.96
PDE6B-201ENST00000255622 WT1-ASQ06250 92 aa9.05□□□□□ -0.96
PDE6B-201ENST00000255622 CD69Q07108 199 aa9.05□□□□□ -0.96
PDE6B-201ENST00000255622 RUSC1-AS1Q66K80 236 aa9.05□□□□□ -0.96
PDE6B-201ENST00000255622 PRELID3AQ96N28 172 aa9.05□□□□□ -0.96
PDE6B-201ENST00000255622 SAP30LQ9HAJ7 183 aa9.05□□□□□ -0.96
PDE6B-201ENST00000255622 NDUFA4L2Q9NRX3 87 aa9.05□□□□□ -0.96
PDE6B-201ENST00000255622 SH2D7A6NKC9 451 aaPredicted RBP9.04□□□□□ -0.96
PDE6B-201ENST00000255622 FNDC10F2Z333 226 aa9.04□□□□□ -0.96
PDE6B-201ENST00000255622 APELAP0DMC3 54 aa9.04□□□□□ -0.96
PDE6B-201ENST00000255622 PYYP10082 97 aa9.04□□□□□ -0.96
PDE6B-201ENST00000255622 NDUFV3P56181 108 aaKnown RBP9.04□□□□□ -0.96
PDE6B-201ENST00000255622 GAGE2BQ13066 116 aa9.04□□□□□ -0.96
PDE6B-201ENST00000255622 GAGE2EQ4V326 116 aa9.04□□□□□ -0.96
PDE6B-201ENST00000255622 NUP37Q8NFH4 326 aa9.04□□□□□ -0.96
PDE6B-201ENST00000255622 SGK494Q96LW2 274 aa9.04□□□□□ -0.96
PDE6B-201ENST00000255622 MRPL36Q9P0J6 103 aaKnown RBP9.04□□□□□ -0.96
PDE6B-201ENST00000255622 GAGE2DQ9UEU5 116 aa9.04□□□□□ -0.96
PDE6B-201ENST00000255622 ASH1LQ9NR48 2969 aaKnown RBP9.04□□□□□ -0.96
PDE6B-201ENST00000255622 CSN1S1P47710 185 aa9.04□□□□□ -0.96
PDE6B-201ENST00000255622 FLYWCH2Q96CP2 140 aaKnown RBP9.04□□□□□ -0.96
PDE6B-201ENST00000255622 SLC25A2Q9BXI2 301 aa9.04□□□□□ -0.96
PDE6B-201ENST00000255622 TMEM191AQ9H0A3 160 aa9.04□□□□□ -0.96
PDE6B-201ENST00000255622 EDA2RQ9HAV5 297 aa9.04□□□□□ -0.96
PDE6B-201ENST00000255622 TMEM167BQ9NRX6 74 aa9.04□□□□□ -0.96
PDE6B-201ENST00000255622 MSRB2Q9Y3D2 182 aa9.04□□□□□ -0.96
PDE6B-201ENST00000255622 MED13LQ71F56 2210 aa9.04□□□□□ -0.96
PDE6B-201ENST00000255622 IGHV3-72A0A0B4J1Y9 119 aa9.04□□□□□ -0.96
PDE6B-201ENST00000255622 F8W1H4 67 aa9.04□□□□□ -0.96
PDE6B-201ENST00000255622 C16orf97H3BN30 126 aa9.04□□□□□ -0.96
PDE6B-201ENST00000255622 PLAUP00749 431 aa9.04□□□□□ -0.96
PDE6B-201ENST00000255622 SLC25A33Q9BSK2 321 aa9.04□□□□□ -0.96
PDE6B-201ENST00000255622 FAM162BQ5T6X4 162 aa9.03□□□□□ -0.96
PDE6B-201ENST00000255622 RNF125Q96EQ8 232 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms