RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 CLEC3BP05452 202 aa16.88■□□□□ 0.29
CLN6-201ENST00000249806 C5orf56Q8N8D9 126 aa16.88■□□□□ 0.29
CLN6-201ENST00000249806 TMEM75Q8N9X5 138 aa16.88■□□□□ 0.29
CLN6-201ENST00000249806 VN1R17PQ8TDU5 208 aa16.88■□□□□ 0.29
CLN6-201ENST00000249806 ZC2HC1AQ96GY0 325 aa16.88■□□□□ 0.29
CLN6-201ENST00000249806 PGLYRP4Q96LB8 373 aa16.88■□□□□ 0.29
CLN6-201ENST00000249806 NOL4LQ96MY1 436 aaPredicted RBP16.88■□□□□ 0.29
CLN6-201ENST00000249806 TXN2Q99757 166 aa16.88■□□□□ 0.29
CLN6-201ENST00000249806 PSG8Q9UQ74 426 aa16.88■□□□□ 0.29
CLN6-201ENST00000249806 ATP5J2P56134 94 aa16.87■□□□□ 0.29
CLN6-201ENST00000249806 IQCJQ1A5X6 159 aa16.87■□□□□ 0.29
CLN6-201ENST00000249806 ZNF502Q8TBZ5 544 aa16.87■□□□□ 0.29
CLN6-201ENST00000249806 SAMD10Q9BYL1 202 aa16.87■□□□□ 0.29
CLN6-201ENST00000249806 TRAV40A0A0B4J280 105 aa16.86■□□□□ 0.29
CLN6-201ENST00000249806 A0A1B0GXF2 115 aa16.86■□□□□ 0.29
CLN6-201ENST00000249806 TSTD3H0UI37 97 aa16.86■□□□□ 0.29
CLN6-201ENST00000249806 PSG3Q16557 428 aa16.86■□□□□ 0.29
CLN6-201ENST00000249806 CT83Q5H943 113 aa16.86■□□□□ 0.29
CLN6-201ENST00000249806 RABAC1Q9UI14 185 aa16.86■□□□□ 0.29
CLN6-201ENST00000249806 IGHV4-30-2A0A087WSY4 118 aa16.86■□□□□ 0.29
CLN6-201ENST00000249806 IGHV1-69DA0A0B4J2H0 117 aa16.86■□□□□ 0.29
CLN6-201ENST00000249806 NPIPB6E9PJ23 425 aa16.86■□□□□ 0.29
CLN6-201ENST00000249806 IGHV1-69P01742 117 aa16.86■□□□□ 0.29
CLN6-201ENST00000249806 OR2D3Q8NGH3 330 aa16.86■□□□□ 0.29
CLN6-201ENST00000249806 AAMDCQ9H7C9 122 aa16.86■□□□□ 0.29
CLN6-201ENST00000249806 TRBV6-1A0A0K0K1D8 114 aa16.85■□□□□ 0.29
CLN6-201ENST00000249806 K7EQM0 130 aa16.85■□□□□ 0.29
CLN6-201ENST00000249806 PDE6HQ13956 83 aa16.85■□□□□ 0.29
CLN6-201ENST00000249806 PIFOQ8TCI5 191 aa16.85■□□□□ 0.29
CLN6-201ENST00000249806 SOX21Q9Y651 276 aaPredicted RBP16.85■□□□□ 0.29
CLN6-201ENST00000249806 SMAD5-AS1Q9Y6J3 95 aa16.85■□□□□ 0.29
CLN6-201ENST00000249806 ATP5L2Q7Z4Y8 100 aa16.85■□□□□ 0.29
CLN6-201ENST00000249806 USP24Q9UPU5 2620 aa16.84■□□□□ 0.29
CLN6-201ENST00000249806 A0A1W2PS18 150 aa16.84■□□□□ 0.29
CLN6-201ENST00000249806 SCGB2A1O75556 95 aa16.84■□□□□ 0.29
CLN6-201ENST00000249806 GPX1P07203 203 aa16.84■□□□□ 0.29
CLN6-201ENST00000249806 RPL7P18124 248 aaKnown RBP16.84■□□□□ 0.29
CLN6-201ENST00000249806 IGFL4Q6B9Z1 124 aa16.84■□□□□ 0.29
CLN6-201ENST00000249806 CLEC2AQ6UVW9 174 aa16.84■□□□□ 0.29
CLN6-201ENST00000249806 TOMM20LQ6UXN7 152 aa16.84■□□□□ 0.29
CLN6-201ENST00000249806 C18orf32Q8TCD1 76 aa16.84■□□□□ 0.29
CLN6-201ENST00000249806 NAGKQ9UJ70 344 aa16.84■□□□□ 0.29
CLN6-201ENST00000249806 LINC00527Q9UJ94 153 aa16.84■□□□□ 0.29
CLN6-201ENST00000249806 ZFP30Q9Y2G7 519 aa16.84■□□□□ 0.29
CLN6-201ENST00000249806 IGHV4-38-2P0DP08 117 aa16.84■□□□□ 0.29
CLN6-201ENST00000249806 DDTP30046 118 aa16.84■□□□□ 0.29
CLN6-201ENST00000249806 CLEC19AQ6UXS0 136 aa16.84■□□□□ 0.29
CLN6-201ENST00000249806 CRIP1P50238 77 aa16.83■□□□□ 0.28
CLN6-201ENST00000249806 FAM209BQ5JX69 171 aa16.83■□□□□ 0.28
CLN6-201ENST00000249806 NRGNQ92686 78 aa16.83■□□□□ 0.28
CLN6-201ENST00000249806 CCDC140Q96MF4 163 aa16.83■□□□□ 0.28
CLN6-201ENST00000249806 HBBP68871 147 aa16.82■□□□□ 0.28
CLN6-201ENST00000249806 KLK9Q2XQG4 91 aa16.82■□□□□ 0.28
CLN6-201ENST00000249806 RBPMS2Q6ZRY4 209 aaKnown RBP16.82■□□□□ 0.28
CLN6-201ENST00000249806 SIGLECL1Q8N7X8 197 aa16.82■□□□□ 0.28
CLN6-201ENST00000249806 C8orf49Q96NF6 230 aa16.82■□□□□ 0.28
CLN6-201ENST00000249806 GFRA4Q9GZZ7 299 aa16.82■□□□□ 0.28
CLN6-201ENST00000249806 KLK9Q9UKQ9 250 aa16.82■□□□□ 0.28
CLN6-201ENST00000249806 RNF114Q9Y508 228 aa16.82■□□□□ 0.28
CLN6-201ENST00000249806 PRB1P04280 392 aa16.82■□□□□ 0.28
CLN6-201ENST00000249806 KCNS1Q96KK3 526 aa16.82■□□□□ 0.28
CLN6-201ENST00000249806 DEFA6Q01524 100 aa16.81■□□□□ 0.28
CLN6-201ENST00000249806 C16orf54Q6UWD8 224 aa16.81■□□□□ 0.28
CLN6-201ENST00000249806 ZFAND3Q9H8U3 227 aa16.81■□□□□ 0.28
CLN6-201ENST00000249806 NDUFS8O00217 210 aa16.81■□□□□ 0.28
CLN6-201ENST00000249806 PMCHP20382 165 aa16.81■□□□□ 0.28
CLN6-201ENST00000249806 AMTP48728 403 aa16.81■□□□□ 0.28
CLN6-201ENST00000249806 PSG9Q00887 426 aa16.81■□□□□ 0.28
CLN6-201ENST00000249806 ALKBH7Q9BT30 221 aaPredicted RBP16.81■□□□□ 0.28
CLN6-201ENST00000249806 MOB4Q9Y3A3 225 aa16.81■□□□□ 0.28
CLN6-201ENST00000249806 IGKV2-40A0A087WW87 121 aaPredicted RBP16.8■□□□□ 0.28
CLN6-201ENST00000249806 ZNF705FA8MVS1 300 aaPredicted RBP16.8■□□□□ 0.28
CLN6-201ENST00000249806 IGKV2D-40P01614 121 aaPredicted RBP16.8■□□□□ 0.28
CLN6-201ENST00000249806 ZNF705DP0CH99 300 aaPredicted RBP16.8■□□□□ 0.28
CLN6-201ENST00000249806 ZNF705BP0CI00 300 aaPredicted RBP16.8■□□□□ 0.28
CLN6-201ENST00000249806 PAX1P15863 534 aa16.8■□□□□ 0.28
CLN6-201ENST00000249806 HLA-DMBP28068 263 aa16.8■□□□□ 0.28
CLN6-201ENST00000249806 CSN1S1P47710 185 aa16.8■□□□□ 0.28
CLN6-201ENST00000249806 FAM19A2Q8N3H0 131 aa16.8■□□□□ 0.28
CLN6-201ENST00000249806 OR4B1Q8NGF8 309 aa16.8■□□□□ 0.28
CLN6-201ENST00000249806 TMEM190Q8WZ59 177 aa16.8■□□□□ 0.28
CLN6-201ENST00000249806 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.8■□□□□ 0.281e-6■■□□□ 12.3
CLN6-201ENST00000249806 A8MWP6 167 aa16.8■□□□□ 0.28
CLN6-201ENST00000249806 C14orf144Q96I85 54 aa16.8■□□□□ 0.28
CLN6-201ENST00000249806 IGHV3-66A0A0C4DH42 116 aa16.79■□□□□ 0.28
CLN6-201ENST00000249806 FAM231BA6NCW3 169 aa16.79■□□□□ 0.28
CLN6-201ENST00000249806 GOSR1O95249 250 aa16.79■□□□□ 0.28
CLN6-201ENST00000249806 IGHG4P01861 327 aa16.78■□□□□ 0.28
CLN6-201ENST00000249806 MEGF9Q9H1U4 602 aa16.78■□□□□ 0.28
CLN6-201ENST00000249806 ZNF462Q96JM2 2506 aa16.78■□□□□ 0.28
CLN6-201ENST00000249806 IGHV3OR16-13A0A075B7E8 117 aa16.78■□□□□ 0.28
CLN6-201ENST00000249806 IGHV3-74A0A0B4J1X5 117 aa16.78■□□□□ 0.28
CLN6-201ENST00000249806 ZNF324O75467 553 aaPredicted RBP16.78■□□□□ 0.28
CLN6-201ENST00000249806 LY6EQ16553 131 aa16.78■□□□□ 0.28
CLN6-201ENST00000249806 NRN1Q9NPD7 142 aa16.78■□□□□ 0.28
CLN6-201ENST00000249806 CENPEQ02224 2701 aa16.77■□□□□ 0.28
CLN6-201ENST00000249806 CLPSL1A2RUU4 121 aa16.77■□□□□ 0.28
CLN6-201ENST00000249806 CHEK1O14757 476 aa16.77■□□□□ 0.28
CLN6-201ENST00000249806 BUB3O43684 328 aa16.77■□□□□ 0.28
CLN6-201ENST00000249806 TDRG1Q3Y452 100 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms