RNA–Protein interactions for RNA: ENST00000244709.8

TREM1-201, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TREM1, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-201ENST00000244709 ATP6V1G1O75348 118 aa8.64□□□□□ -1.03
TREM1-201ENST00000244709 IGLV1-51P01701 117 aa8.64□□□□□ -1.03
TREM1-201ENST00000244709 IGLL1P15814 213 aa8.64□□□□□ -1.03
TREM1-201ENST00000244709 PSMB3P49720 205 aa8.64□□□□□ -1.03
TREM1-201ENST00000244709 UBE2G2P60604 165 aa8.64□□□□□ -1.03
TREM1-201ENST00000244709 NDUFA5Q16718 116 aa8.64□□□□□ -1.03
TREM1-201ENST00000244709 C9orf66Q5T8R8 295 aa8.64□□□□□ -1.03
TREM1-201ENST00000244709 RBPMS2Q6ZRY4 209 aaKnown RBP8.64□□□□□ -1.03
TREM1-201ENST00000244709 MS4A6AQ9H2W1 248 aa8.64□□□□□ -1.03
TREM1-201ENST00000244709 NRN1Q9NPD7 142 aa8.64□□□□□ -1.03
TREM1-201ENST00000244709 NOTCH3Q9UM47 2321 aa8.64□□□□□ -1.03
TREM1-201ENST00000244709 NDUFB4O95168 129 aa8.63□□□□□ -1.03
TREM1-201ENST00000244709 CD5P06127 495 aa8.63□□□□□ -1.03
TREM1-201ENST00000244709 TFPI2P48307 235 aa8.63□□□□□ -1.03
TREM1-201ENST00000244709 WFDC3Q8IUB2 231 aa8.63□□□□□ -1.03
TREM1-201ENST00000244709 MCRIP2Q9BUT9 160 aaKnown RBP8.63□□□□□ -1.03
TREM1-201ENST00000244709 GNG13Q9P2W3 67 aa8.63□□□□□ -1.03
TREM1-201ENST00000244709 SOCS3O14543 225 aa8.62□□□□□ -1.03
TREM1-201ENST00000244709 TSPAN4O14817 238 aa8.62□□□□□ -1.03
TREM1-201ENST00000244709 PDE6HQ13956 83 aa8.62□□□□□ -1.03
TREM1-201ENST00000244709 GUK1Q16774 197 aa8.62□□□□□ -1.03
TREM1-201ENST00000244709 DCANP1Q8TF63 244 aa8.62□□□□□ -1.03
TREM1-201ENST00000244709 YTHDF2Q9Y5A9 579 aaKnown RBP8.62□□□□□ -1.03
TREM1-201ENST00000244709 TRAV8-2A0A0B4J237 113 aa8.62□□□□□ -1.03
TREM1-201ENST00000244709 TRAV25A0A0B4J276 109 aa8.62□□□□□ -1.03
TREM1-201ENST00000244709 FAM74A7A6NL05 159 aa8.62□□□□□ -1.03
TREM1-201ENST00000244709 DNASE2O00115 360 aaPredicted RBP8.62□□□□□ -1.03
TREM1-201ENST00000244709 PAGE4O60829 102 aa8.62□□□□□ -1.03
TREM1-201ENST00000244709 MEOX2P50222 304 aa8.62□□□□□ -1.03
TREM1-201ENST00000244709 PPT1P50897 306 aa8.62□□□□□ -1.03
TREM1-201ENST00000244709 INSL3P51460 131 aa8.62□□□□□ -1.03
TREM1-201ENST00000244709 RANP62826 216 aaKnown RBP8.62□□□□□ -1.03
TREM1-201ENST00000244709 HAGHQ16775 308 aa8.62□□□□□ -1.03
TREM1-201ENST00000244709 PRR31Q5SQ13 230 aa8.62□□□□□ -1.03
TREM1-201ENST00000244709 IGFL4Q6B9Z1 124 aa8.62□□□□□ -1.03
TREM1-201ENST00000244709 EXOC3-AS1Q8N2X6 119 aa8.62□□□□□ -1.03
TREM1-201ENST00000244709 OR2K2Q8NGT1 345 aa8.62□□□□□ -1.03
TREM1-201ENST00000244709 C16orf92Q96LL3 132 aa8.62□□□□□ -1.03
TREM1-201ENST00000244709 Q9H3A6 140 aa8.62□□□□□ -1.03
TREM1-201ENST00000244709 MANBALQ9NQG1 85 aa8.62□□□□□ -1.03
TREM1-201ENST00000244709 ZNF331Q9NQX6 463 aaPredicted RBP8.62□□□□□ -1.03
TREM1-201ENST00000244709 SORL1Q92673 2214 aa8.61□□□□□ -1.03
TREM1-201ENST00000244709 K7EQG2 157 aa8.61□□□□□ -1.03
TREM1-201ENST00000244709 ZNF253O75346 499 aa8.61□□□□□ -1.03
TREM1-201ENST00000244709 IFNA1P01562 189 aa8.61□□□□□ -1.03
TREM1-201ENST00000244709 HLA-DMBP28068 263 aa8.61□□□□□ -1.03
TREM1-201ENST00000244709 PAFAH1B2P68402 229 aa8.61□□□□□ -1.03
TREM1-201ENST00000244709 PSG9Q00887 426 aa8.61□□□□□ -1.03
TREM1-201ENST00000244709 GUCA2BQ16661 112 aa8.61□□□□□ -1.03
TREM1-201ENST00000244709 FAM24BQ8N5W8 94 aa8.61□□□□□ -1.03
TREM1-201ENST00000244709 RNF182Q8N6D2 247 aa8.61□□□□□ -1.03
TREM1-201ENST00000244709 SLC50A1Q9BRV3 221 aa8.61□□□□□ -1.03
TREM1-201ENST00000244709 A0A1W2PRE2 83 aa8.6□□□□□ -1.03
TREM1-201ENST00000244709 GGTLC3B5MD39 225 aa8.6□□□□□ -1.03
TREM1-201ENST00000244709 PRB4P10163 310 aaPredicted RBP8.6□□□□□ -1.03
TREM1-201ENST00000244709 BCL2P10415 239 aa8.6□□□□□ -1.03
TREM1-201ENST00000244709 ATP5G3P48201 142 aa8.6□□□□□ -1.03
TREM1-201ENST00000244709 PMS2P11Q13670 270 aa8.6□□□□□ -1.03
TREM1-201ENST00000244709 CST9LP1Q5W188 147 aa8.6□□□□□ -1.03
TREM1-201ENST00000244709 LCN12Q6JVE5 192 aa8.6□□□□□ -1.03
TREM1-201ENST00000244709 C20orf173Q96LM9 149 aa8.6□□□□□ -1.03
TREM1-201ENST00000244709 SPAG8Q99932 426 aaPredicted RBP8.6□□□□□ -1.03
TREM1-201ENST00000244709 RARRES2Q99969 163 aa8.6□□□□□ -1.03
TREM1-201ENST00000244709 ARL2-SNX15V9GYD0 113 aa8.6□□□□□ -1.03
TREM1-201ENST00000244709 TRAV2A0A0B4J234 112 aa8.59□□□□□ -1.03
TREM1-201ENST00000244709 LOC102723971A0A1B0GUV8 181 aa8.59□□□□□ -1.03
TREM1-201ENST00000244709 PGPA6NDG6 321 aa8.59□□□□□ -1.03
TREM1-201ENST00000244709 RBFOX3A6NFN3 312 aa8.59□□□□□ -1.03
TREM1-201ENST00000244709 ICAM4Q14773 271 aa8.59□□□□□ -1.03
TREM1-201ENST00000244709 TOR2AQ5JU69 321 aa8.59□□□□□ -1.03
TREM1-201ENST00000244709 OTORQ9NRC9 128 aa8.59□□□□□ -1.03
TREM1-201ENST00000244709 ZNF256Q9Y2P7 627 aaPredicted RBP8.59□□□□□ -1.03
TREM1-201ENST00000244709 OR4C46A6NHA9 309 aa8.59□□□□□ -1.03
TREM1-201ENST00000244709 C11orf94C9JXX5 98 aa8.59□□□□□ -1.03
TREM1-201ENST00000244709 M0R3E3 92 aa8.59□□□□□ -1.03
TREM1-201ENST00000244709 ISLRO14498 428 aa8.59□□□□□ -1.03
TREM1-201ENST00000244709 WIPF1O43516 503 aa8.59□□□□□ -1.03
TREM1-201ENST00000244709 ZNF688P0C7X2 276 aa8.59□□□□□ -1.03
TREM1-201ENST00000244709 ID1P41134 155 aa8.59□□□□□ -1.03
TREM1-201ENST00000244709 SUMO1P63165 101 aaKnown RBP8.59□□□□□ -1.03
TREM1-201ENST00000244709 OXLD1Q5BKU9 147 aa8.59□□□□□ -1.03
TREM1-201ENST00000244709 ZNF506Q5JVG8 444 aa8.59□□□□□ -1.03
TREM1-201ENST00000244709 SAMD13Q5VXD3 122 aa8.59□□□□□ -1.03
TREM1-201ENST00000244709 LYPD1Q8N2G4 141 aa8.59□□□□□ -1.03
TREM1-201ENST00000244709 RXFP4Q8TDU9 374 aa8.59□□□□□ -1.03
TREM1-201ENST00000244709 LINC00052Q96N35 136 aa8.59□□□□□ -1.03
TREM1-201ENST00000244709 AAMDCQ9H7C9 122 aa8.59□□□□□ -1.03
TREM1-201ENST00000244709 ZNF705FA8MVS1 300 aaPredicted RBP8.58□□□□□ -1.04
TREM1-201ENST00000244709 SLC25A5P05141 298 aaKnown RBP8.58□□□□□ -1.04
TREM1-201ENST00000244709 GNG5P63218 68 aa8.58□□□□□ -1.04
TREM1-201ENST00000244709 SRSF3P84103 164 aaKnown RBP8.58□□□□□ -1.04
TREM1-201ENST00000244709 PSG3Q16557 428 aa8.58□□□□□ -1.04
TREM1-201ENST00000244709 CCDC28AQ8IWP9 274 aa8.58□□□□□ -1.04
TREM1-201ENST00000244709 GPR61Q9BZJ8 451 aa8.58□□□□□ -1.04
TREM1-201ENST00000244709 EIF5A2Q9GZV4 153 aaKnown RBP8.58□□□□□ -1.04
TREM1-201ENST00000244709 VAX2Q9UIW0 290 aa8.58□□□□□ -1.04
TREM1-201ENST00000244709 RPH3ALQ9UNE2 315 aa8.58□□□□□ -1.04
TREM1-201ENST00000244709 LINC00862A6NCI5 91 aa8.57□□□□□ -1.04
TREM1-201ENST00000244709 TAGLN2P37802 199 aaKnown RBP8.57□□□□□ -1.04
TREM1-201ENST00000244709 CD81P60033 236 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms